prot_A-nodosum_M_contig839.38.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig839.38.1
Unique Nameprot_A-nodosum_M_contig839.38.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length202
Homology
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BLAST of mRNA_A-nodosum_M_contig839.38.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.290e-14
Identity = 44/121 (36.36%), Postives = 72/121 (59.50%), Query Frame = 0 
Query:   47 VWIGDSGATTHCHMTRSAELMYDTKLPSPHRSRIILGDGSIRKVQFVGKMDLVFHSRTDHPVTLHDVSFVPDLGFNLFSFHVVQEKHEIILNKTGAHLLNGRLVFPRRRNGSSLRATRVMP 167
            V++GD+GA  H  +  S E +   +LP P    ++LGDG    V+F G +D++FH   D  VTL +V  VP L  ++   +++Q++HEI LN+  A +L GR+   +  +G+ ++ TRV P
Sbjct:  712 VFLGDTGAVVH--VVPSGEKV---RLPLPEERLLMLGDGKHIPVEFFGDLDVIFHCPEDVRVTLQNVGVVPGLALDILPLNMIQDRHEIKLNRDRASILGGRVRMTKFPHGNYIQGTRVDP 827
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig839.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYB5_9PHAE1.290e-1436.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig839contigA-nodosum_M_contig839:320807..321412 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig839.38.1mRNA_A-nodosum_M_contig839.38.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig839 320807..321413 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig839.38.1 ID=prot_A-nodosum_M_contig839.38.1|Name=mRNA_A-nodosum_M_contig839.38.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=202bp
QAQYVPPGEFSSSGLTDGRVDGDSVGGSYLPSAFVGHPIGVDQVNDVWIG
DSGATTHCHMTRSAELMYDTKLPSPHRSRIILGDGSIRKVQFVGKMDLVF
HSRTDHPVTLHDVSFVPDLGFNLFSFHVVQEKHEIILNKTGAHLLNGRLV
FPRRRNGSSLRATRVMPGTHASASNALATLTDPPSPVQYRTVTSPVAQET
SS
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