prot_A-nodosum_M_contig83.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig83.29.1
Unique Nameprot_A-nodosum_M_contig83.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length224
Homology
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: D7FWQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ8_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 3.410e-37
Identity = 76/123 (61.79%), Postives = 93/123 (75.61%), Query Frame = 0
Query:    1 MDGSKSDDEFSLDPAGEREA---------DEAALRAALHFHVGEICSAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAA-NLNLGKK 113
            MDG+ SDDEFSL+P  ++E          DE ALRAALH+ VGE+CS E     M+G+AVSTLAEVVFK++E++ALDLRVFA+H KRAV+G+DDVK  ARKD K+V KL  FE+A NLN GKK
Sbjct:    1 MDGAVSDDEFSLEPRADQEGGDRDSNSHEDELALRAALHYSVGEVCSGENGKIAMTGSAVSTLAEVVFKFSESLALDLRVFAKHGKRAVVGVDDVKCAARKDPKLVGKLVGFESAMNLNAGKK 123          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A6H5JDS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDS7_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 2.080e-34
Identity = 76/123 (61.79%), Postives = 94/123 (76.42%), Query Frame = 0
Query:    1 MDGSKSDDEFSLDPAGEREA---------DEAALRAALHFHVGEICSAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAA-NLNLGKK 113
            MDG+ SD EFSL+P  ++E          DE ALRAALH+ VGE+CS E     ++G+AVSTLAEVVFK++E++ALDLRVFA+H KRAV+G+DDVK  ARKD K+VEKLA FE+A NLN GKK
Sbjct:    1 MDGAVSD-EFSLEPRADQEGGDRDSSSHEDELALRAALHYSVGEVCSGENGKIAVTGSAVSTLAEVVFKFSESLALDLRVFAKHGKRAVVGVDDVKCAARKDPKLVEKLAGFESAMNLNAGKK 122          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A7S2WNE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNE5_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.960e-15
Identity = 45/87 (51.72%), Postives = 58/87 (66.67%), Query Frame = 0
Query:   26 RAALHFHVGEICSAETA----GKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAAFEAANL 108
            R AL   VG+I     A      P++GAAVSTL EVV KY +   +DL+ FA+HAKRA +  +DVKLLARK  ++++ L AFEAANL
Sbjct:    5 RGALQHAVGKIAERAAARVPGAMPLTGAAVSTLTEVVLKYIKVAVVDLKHFAKHAKRAGVSTEDVKLLARKTPRLLQDLEAFEAANL 91          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A822DQ03_9NEOB (Centromere protein S n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822DQ03_9NEOB)

HSP 1 Score: 68.6 bits (166), Expect = 3.290e-11
Identity = 39/94 (41.49%), Postives = 57/94 (60.64%), Query Frame = 0
Query:   25 LRAALHFHVGEIC--SAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAAFE---AANLNLGKK 113
            LRAA+H+ VG +C  +AE      S  AV+ ++E+ F+  E  A DL +FARHAKR+ I +DDVKLL R+   ++  ++ F    AAN    K+
Sbjct:   14 LRAAVHYTVGGLCQETAEEKHVTFSKQAVAAISEITFRQCETFAKDLEMFARHAKRSTINMDDVKLLCRRSRSLLNHISTFSDEIAANNQKAKR 107          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A197KET3_9FUNG (Uncharacterized protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KET3_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 3.970e-11
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   25 LRAALHFHVGEICSAETA--GKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAA 102
            L+AA+ F VGEIC+AE       ++   +++LAE+VF   E +  DL +FA+HAKR+ + +DDVKL AR+++ + E +AA
Sbjct:   12 LKAAVWFTVGEICNAEKERLNVAITPQLIASLAEIVFAQAETLGKDLEMFAKHAKRSTVNVDDVKLAARRNSSLYELMAA 91          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A5N5STA4_9CRUS (Centromere protein S (Fragment) n=2 Tax=Armadillidium TaxID=13346 RepID=A0A5N5STA4_9CRUS)

HSP 1 Score: 67.0 bits (162), Expect = 1.660e-10
Identity = 43/101 (42.57%), Postives = 62/101 (61.39%), Query Frame = 0
Query:    1 MDGSKSDDEF-SLDPAGEREADEAALRAALHFHVGEICSA--ETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVE 98
            MD  K+  E   LD  G  +A    ++AALH  VG+I  +     G   S  AV+TLAE++ +  E  A+DL  FA+HA+R++IG+DDVKLLAR++  + E
Sbjct:    1 MDNEKNQSENPELDDLGHSQA----VKAALHLTVGQISKSVGNEFGLTFSKPAVATLAELINRQIEVYAIDLEAFAKHARRSLIGVDDVKLLARRNRSLTE 97          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A7N4NVR6_SARHA (Centromere protein S n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4NVR6_SARHA)

HSP 1 Score: 67.4 bits (163), Expect = 1.920e-10
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   25 LRAALHFHVGEIC--SAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKL 100
            L+AALH+ VG IC  +AE  G   +   ++ ++EV F+  E  A DL +FARHAKR+ I ++DVKLLAR+ + ++  +
Sbjct:   51 LKAALHYTVGSICQEAAEAKGVRFTKPTIAAISEVTFRQCEHFAKDLEMFARHAKRSTINMEDVKLLARRSSSLLNHI 128          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A8D0C3D5_9SAUR (Centromere protein S n=2 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0C3D5_9SAUR)

HSP 1 Score: 66.6 bits (161), Expect = 2.920e-10
Identity = 37/92 (40.22%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    9 EFSLDPAGEREADEAALRAALHFHVGEICSAETAGKPM--SGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVE 98
            E   D  GE E  +  L+AA H+ V   C      K +  S  A++ ++E+ F+  E  A DL +FARHAKR+ I L+DVKLLAR+ + ++E
Sbjct:   16 EAQRDEEGEEEGGDGRLKAAFHYTVACFCEEVGEDKEIQFSKQAIAAISEITFRQCECFAKDLEMFARHAKRSTINLEDVKLLARRSSSLLE 107          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A0A7N4NH22_SARHA (Centromere protein S n=2 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4NH22_SARHA)

HSP 1 Score: 67.4 bits (163), Expect = 2.980e-10
Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = 0
Query:   25 LRAALHFHVGEIC--SAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKL 100
            L+AALH+ VG IC  +AE  G   +   ++ ++EV F+  E  A DL +FARHAKR+ I ++DVKLLAR+ + ++  +
Sbjct:   75 LKAALHYTVGSICQEAAEAKGVRFTKPTIAAISEVTFRQCEHFAKDLEMFARHAKRSTINMEDVKLLARRSSSLLNHI 152          
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Match: A7RMQ5_NEMVE (Centromere protein S n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RMQ5_NEMVE)

HSP 1 Score: 66.2 bits (160), Expect = 3.080e-10
Identity = 35/83 (42.17%), Postives = 53/83 (63.86%), Query Frame = 0
Query:   25 LRAALHFHVGEIC--SAETAGKPMSGAAVSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKLAAFEA 105
            L+AALH+ VG+IC  +   AG   S   V+ L E  ++  E+ A+DL +FA+HAKR+ I  +DVKLLARK   + + +  F++
Sbjct:   25 LKAALHYTVGKICEETGAEAGLTFSRQFVAALTETSYRQCESFAVDLELFAKHAKRSTINNEDVKLLARKSPSLAQHIKKFDS 107          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig83.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWQ8_ECTSI3.410e-3761.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JDS7_9PHAE2.080e-3461.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2WNE5_9STRA1.960e-1551.72Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A822DQ03_9NEOB3.290e-1141.49Centromere protein S n=1 Tax=Ranitomeya imitator T... [more]
A0A197KET3_9FUNG3.970e-1143.75Uncharacterized protein n=1 Tax=Linnemannia elonga... [more]
A0A5N5STA4_9CRUS1.660e-1042.57Centromere protein S (Fragment) n=2 Tax=Armadillid... [more]
A0A7N4NVR6_SARHA1.920e-1043.59Centromere protein S n=1 Tax=Sarcophilus harrisii ... [more]
A0A8D0C3D5_9SAUR2.920e-1040.22Centromere protein S n=2 Tax=Salvator merianae Tax... [more]
A0A7N4NH22_SARHA2.980e-1043.59Centromere protein S n=2 Tax=Sarcophilus harrisii ... [more]
A7RMQ5_NEMVE3.080e-1042.17Centromere protein S n=1 Tax=Nematostella vectensi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029003CENP-S/Mhf1PFAMPF15630CENP-Scoord: 24..95
e-value: 3.0E-19
score: 69.2
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 4..126
e-value: 2.6E-22
score: 81.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 23..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..223
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..178
NoneNo IPR availablePANTHERPTHR22980CORTISTATINcoord: 13..126
NoneNo IPR availablePANTHERPTHR22980:SF0CENTROMERE PROTEIN Scoord: 13..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig83contigA-nodosum_M_contig83:309460..324721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig83.29.1mRNA_A-nodosum_M_contig83.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig83 309410..325082 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig83.29.1 ID=prot_A-nodosum_M_contig83.29.1|Name=mRNA_A-nodosum_M_contig83.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=224bp
MDGSKSDDEFSLDPAGEREADEAALRAALHFHVGEICSAETAGKPMSGAA
VSTLAEVVFKYTEAMALDLRVFARHAKRAVIGLDDVKLLARKDAKMVEKL
AAFEAANLNLGKKKTTARKKKKQQQRQPSEVGTVEAPGANIGEDGRNDDS
TDARKDSKSSNVMMTSTRNGQPQASAVDELENVINLLEDDDDDDFDGGDP
RGGQAAGGEEGGDSDGSSDDLLL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029003CENP-S/Mhf1
IPR009072Histone-fold