prot_A-nodosum_M_contig8275.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8275.1.1
Unique Nameprot_A-nodosum_M_contig8275.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length88
Homology
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BLAST of mRNA_A-nodosum_M_contig8275.1.1 vs. uniprot
Match: A0A6H5KYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYB5_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 6.920e-8
Identity = 27/72 (37.50%), Postives = 45/72 (62.50%), Query Frame = 0 
Query:    1 GKLDLVFHSRTDYLVTLHDVSFVPDLGFNLFSFHVVQEKHEIILNKSGAHLLDGRLVFPRRRNGSSLRATRV 72
            G LD++FH   D  VTL +V  VP L  ++   +++Q++HEI LN+  A +L GR+   +  +G+ ++ TRV
Sbjct:  754 GDLDVIFHCPEDVRVTLQNVGVVPGLALDILPLNMIQDRHEIKLNRDRASILGGRVRMTKFPHGNYIQGTRV 825
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8275.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYB5_9PHAE6.920e-837.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8275contigA-nodosum_M_contig8275:21152..21415 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8275.1.1mRNA_A-nodosum_M_contig8275.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8275 21152..21417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8275.1.1 ID=prot_A-nodosum_M_contig8275.1.1|Name=mRNA_A-nodosum_M_contig8275.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=88bp
GKLDLVFHSRTDYLVTLHDVSFVPDLGFNLFSFHVVQEKHEIILNKSGAH
LLDGRLVFPRRRNGSSLRATRVMQGAHASANNALATFT
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