prot_A-nodosum_M_contig8237.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8237.1.1
Unique Nameprot_A-nodosum_M_contig8237.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length163
Homology
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BLAST of mRNA_A-nodosum_M_contig8237.1.1 vs. uniprot
Match: D7FIW7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW7_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 1.470e-39
Identity = 73/116 (62.93%), Postives = 91/116 (78.45%), Query Frame = 0 
Query:   48 KVTAFPAKEGEAWVDPPLFRNPQIDVGSWEEEVILNDSQKPHRAKFPMPLHDPDMTYGTLATPRRTLKILRTEAQQENTHIVERTRKRQMALEKQKRLRDAAYKTGYTINTLGEGK 163
            + TAFPA EG  W+DPP   NPQ+D G WE +V+L+DSQK  +   P+ L DPDM +G L TPR +L+IL+TEAQQEN+HI+ERT +RQMA EKQKRL+ AA KTGYTINT+G+GK
Sbjct:  407 RTTAFPAAEGSPWIDPPSVLNPQVDGGGWESQVLLDDSQKLKKPTIPVYLDDPDMLFGALHTPRPSLRILQTEAQQENSHILERTNRRQMATEKQKRLQSAAMKTGYTINTVGDGK 522
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8237.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIW7_ECTSI1.470e-3962.93Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8237contigA-nodosum_M_contig8237:17269..19652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8237.1.1mRNA_A-nodosum_M_contig8237.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8237 17269..19652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8237.1.1 ID=prot_A-nodosum_M_contig8237.1.1|Name=mRNA_A-nodosum_M_contig8237.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=163bp
WFFTDNYHVGDGGNTSLRRVKNQARPSAAALGAPAIASPTAMSMFEPKVT
AFPAKEGEAWVDPPLFRNPQIDVGSWEEEVILNDSQKPHRAKFPMPLHDP
DMTYGTLATPRRTLKILRTEAQQENTHIVERTRKRQMALEKQKRLRDAAY
KTGYTINTLGEGK
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