mRNA_A-nodosum_M_contig823.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig823.14.2
Unique NamemRNA_A-nodosum_M_contig823.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: D7FW40_ECTSI (GMC_OxRdtase_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW40_ECTSI)

HSP 1 Score: 891 bits (2302), Expect = 8.480e-316
Identity = 447/576 (77.60%), Postives = 505/576 (87.67%), Query Frame = 1 
Query:  178 STNSIRNREPLNFPSLRKAAVP-SMSAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGKDNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            ST S   R     P+ R A    SMS  +EGH++II+GGGTAGCVLANRL+A KDNSVLVLEAGS KFN R+IKMPI ILR        LF+SVFDWGFQS+ E+F T D IYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGV+GW GKDVLPYFKKAENNRSKK+G FH KGGLMQVENARYMNPLTK FFKACEQAG+ +N+DFNDWSHSQEGFGRFQVAQK G+RCSAASSYLK+AMGRKNLDVQTSAQ TK++I++G A GVEY++DGEK+IA LA GGE+LLAGGA+SSP VL+LSGVGPAEHL  K IEVKS++PGVGKNLRDHPAVTVM+DIN+P+SITD+VL EGSG VNK+TAL+WLLTGTGPLTSPGCENGAF+KT+  KAA+DLQLRFVPGR T+PDGVK+YNTIGT+GRPPSGVT+QVV IR +SEG V+LRSSDPF+ P I TNYL+ GED+ SLT+GI++AR+LF QEAF  MV KEVFPG+DN ++ EYIKSTVHSANALVGTCKMG ESD M+VVN  LKV+GV+GLRV+DSSVMPSIPGGQTAAPTIMIAEKAADMLM
Sbjct:   30 STISRSARGTTRVPAARYATSSVSMSVAEEGHKFIIIGGGTAGCVLANRLSADKDNSVLVLEAGSEKFNDRNIKMPIAILR--------LFKSVFDWGFQSENEKFATGDGIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVDGWKGKDVLPYFKKAENNRSKKKGEFHGKGGLMQVENARYMNPLTKLFFKACEQAGLSENEDFNDWSHSQEGFGRFQVAQKRGKRCSAASSYLKEAMGRKNLDVQTSAQITKVLIENGGAIGVEYVRDGEKKIAKLAVGGEILLAGGAISSPQVLMLSGVGPAEHLRSKGIEVKSNVPGVGKNLRDHPAVTVMADINKPISITDKVLKEGSGDVNKITALQWLLTGTGPLTSPGCENGAFFKTTPDKAAADLQLRFVPGRSTTPDGVKAYNTIGTKGRPPSGVTVQVVGIRPQSEGHVELRSSDPFDKPHIVTNYLESGEDMASLTNGIEMARKLFDQEAFGEMVDKEVFPGRDNKEISEYIKSTVHSANALVGTCKMGEESDNMSVVNSALKVKGVAGLRVIDSSVMPSIPGGQTAAPTIMIAEKAADMLM 597
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A835Z8N3_9STRA (GMC oxidoreductase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N3_9STRA)

HSP 1 Score: 619 bits (1596), Expect = 7.790e-210
Identity = 311/550 (56.55%), Postives = 403/550 (73.27%), Query Frame = 1 
Query:  262 EGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGKDNL---QLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            E ++Y++VGGGT GCVLA+RLT  K NSVLVLEAG+ K   ++IK+P+GILR        LFRS FDW +++++EE      IYL RGKVLGGSSC N MLY RG  ADY++WGV+GW+ ++VLPYF+++E NR+   G +H K G   VE  RY NPL K F +AC QAG+  NDDFN+WS SQEG G FQ AQK GRR +AASSYLK+AM RKNL ++T A  T+++    +A GVEY++DGEK++A +  GGEVL+ GGA++SP +LLLSGVGPA+HL  K + V  DL GVG NL+D PAVTVMSD+ +P+SITD++  +GS  V    AL+WLL G GPLTSPGC++G F KT A    +DLQ+RFVPGR  +PDGV++Y  IG  G+  SGVT+QV+  R KS G ++L+SSDPFE P I  NYL + ED+ +L  G++IAR +  Q++FKG V KEVFPG        + +YI S+VHSANA+ GTCKMG E D+ AVV+  L+V+G+  LRVVD+SVMPS+PGGQ A+  +MIAEKAADM++
Sbjct:    9 EAYKYVVVGGGTCGCVLADRLTEDKANSVLVLEAGTGKHRDKNIKVPVGILR--------LFRSAFDWQYETEREEHAGDRGIYLARGKVLGGSSCLNAMLYTRGASADYNSWGVKGWSAEEVLPYFRRSEGNRNLPAGDYHGKDGAYSVEFVRYKNPLHKLFHEACLQAGLPTNDDFNNWSRSQEGLGAFQCAQKFGRRVTAASSYLKRAMKRKNLAIETQAHATRVLFDGDKAIGVEYVKDGEKQVAKIQQGGEVLMCGGAINSPQLLLLSGVGPADHLQAKGVPVVKDLQGVGANLQDQPAVTVMSDVGKPISITDDIFKKGSTKVRPSAALKWLLFGRGPLTSPGCDHGGFLKTKADLPEADLQIRFVPGRAETPDGVQAYRNIGDSGQFNSGVTVQVIGCRPKSRGHLKLKSSDPFEKPEIVVNYLDEQEDVRTLVRGVEIARTILAQDSFKGTVTKEVFPGPSTSGEQSVQQYISSSVHSANAIAGTCKMG-EGDD-AVVDNNLRVKGLKSLRVVDTSVMPSVPGGQLASVAVMIAEKAADMIL 548
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A7S2USP3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USP3_9STRA)

HSP 1 Score: 572 bits (1475), Expect = 6.290e-191
Identity = 296/571 (51.84%), Postives = 398/571 (69.70%), Query Frame = 1 
Query:  220 SLRKAAVPSMSAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEG-----WTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQ--GRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGK---DNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            +L +A++ +M    +   Y+IVGGGT+GCVLANRL+  K + VLVLEAG    N + IK+P          TV+LFRS+FDW F+S KE+      IYL RGK LGGSSC NVMLYHRG++ DY+ W         W+   VLPYFKKAE N+  K   +HN+GGLM V++ +Y NPL+K F  AC+  G  + +DFNDWS SQEG GRFQV QK GRR ++A SYLK+A  R NL+V+T+A  TK+ ++DG+A  V Y Q  E   A +AP GE+LL  GA+ SPH+L+LSG+G    L + NI V  +LPGVGKN++DHPAV V  D  E + ++  +  +G+  V  + AL+W LTG GPLTS GC++G F+KT     + D+QLRF+ GRG +PDG+ +Y  IG    G  P G++LQV+ IR+KS+G V+L S++P + PR+ + +L   ED+++L +GIKIAR++   +AF+G V +EVFPGK   D+  +++YI+STVH+ANA+VGTC+MG   D  AVV+PELKV GV GLRVVDSSVMP+IPGGQT APT+M+AEKAAD++M
Sbjct:   40 TLNQASLNNMFMSADAFDYVIVGGGTSGCVLANRLSEKKGSKVLVLEAGGSSDN-KLIKVPTA--------TVKLFRSMFDWVFESHKEKACADRDIYLPRGKALGGSSCINVMLYHRGDKKDYEKWSEATGARHLWSPDSVLPYFKKAEANKVMKNSEYHNQGGLMSVDHVQYQNPLSKMFLSACKNLGFAEKEDFNDWSQSQEGVGRFQVTQKRGRRWTSAMSYLKKAKRRSNLEVETNAHATKVTVEDGKAKSVIYRQGDELVEAKVAPEGEILLTAGAIQSPHLLMLSGIGDENELQQHNIPVVQNLPGVGKNMQDHPAVVVARDA-EDIGLSHALFKKGTNEVRPLQALKWALTGKGPLTSVGCDHGGFFKTKPDLESPDVQLRFIAGRGNNPDGLAAYTEIGQSENGFRP-GISLQVIGIRAKSQGTVKLASANPMDKPRVESGFLTNPEDVETLKNGIKIARQIAESDAFEGKVHQEVFPGKEINDDASMEQYIRSTVHTANAIVGTCRMGRRDDPEAVVDPELKVIGVDGLRVVDSSVMPNIPGGQTGAPTVMLAEKAADLIM 599
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A6V1RKB3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RKB3_HETAK)

HSP 1 Score: 552 bits (1422), Expect = 1.180e-182
Identity = 291/552 (52.72%), Postives = 366/552 (66.30%), Query Frame = 1 
Query:  274 YIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAW---GVEGWTGKDVLPYFKKAENNRSK-KEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKN--DDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGKD---NLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            Y+I+GGGTAG VLAN+L+A   N VLVLEAG        +K P G L+        LF+S  DW F S K+       IYLCRGK LGGSSC NVMLYHRG+EADY AW   G EGW    VLPYFK ++N R    +G +H +GG++ VE  RY NPL++ F  A EQ G+     +DFNDWS  QEGFGRFQV Q+ GRR   A SYLKQA+ R NL+ +T A  TKI I+DGRA GVEY+QD  K+   L  GGEVLLA GAV SPH+L LSGVG    L  K +  + DLP VGK+LRDHPA  V  DI EPV++TD +       V      +W L G GP+T  GC++GAF KT    A +DLQ+RF+P RG +PDG+ +   +  +G    G+  Q+VA R KSEG V L S++PF+ P I T +L   ED+ +L  G+++AR++  QEAF+GMV  EVFPG D   +  L+ Y++ T H+ANALVGTC+MG   D  AVV+P L+VRGV GLRVVD+SVMP++PGGQT APT+MIAE+AAD+L+
Sbjct:   52 YVILGGGTAGLVLANKLSAEAGNKVLVLEAGGAPDKNLLVKAPAGALK--------LFQSALDWVFFSHKDPGCHDRDIYLCRGKTLGGSSCVNVMLYHRGDEADYRAWEAAGAEGWGPDAVLPYFKSSQNAREPGMKGAYHGRGGMLDVELPRYQNPLSRMFLAAAEQLGLAGGLTEDFNDWSRPQEGFGRFQVQQRKGRRWHTAMSYLKQALKRPNLETRTGAHITKIQIEDGRAVGVEYVQDNVKKAVRLGEGGEVLLAAGAVGSPHLLQLSGVGDRAELEAKGVPCQVDLPAVGKHLRDHPAANVYFDIAEPVALTDAMFTRDGKRVKPSVMAQWALLGRGPMTCIGCDHGAFVKTRPGLAQADLQIRFLPARGENPDGIATLTEVAREGSKARGLAFQLVACRPKSEGKVSLASANPFDAPEIQTGFLTAEEDVATLREGVRLARQIASQEAFRGMVTGEVFPGADVETDAGLEAYLRQTCHTANALVGTCRMGAAGDAGAVVDPALRVRGVRGLRVVDASVMPTLPGGQTGAPTVMIAERAADLLL 595
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A4D9DA48_9STRA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA48_9STRA)

HSP 1 Score: 515 bits (1326), Expect = 6.850e-168
Identity = 282/596 (47.32%), Postives = 386/596 (64.77%), Query Frame = 1 
Query:  148 LQDFLNLQRSSTNSIRNREPLNFPSLRKAAVPSMSAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAW---GVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRK-NLDVQTSAQTTKIVIK---DGRATGVEYI-QDGEK-RIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPG---KDNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADML 1899
            LQ F+        +I  R  L   S++  A  + S     + YIIVGGG  GCVLANRLT      VL+LEAG        + +P G++R        LF+S  DW F+S  E  +    +YL RGK +GGSS  NVML HRG  +DY  W   G +GW  ++ L YFKK E+N    EGR+H +GG+  V++ +Y NPL+KRF +ACE+ G + N DFNDWSH Q+G+G F+VAQK+G+R +AAS YL +A+ R+ NLD+ + A  T+++++   + +A GVE+  +DG+  ++  +   GEVLLAGGAV+SP +L+LSG+GP   L    I  K + PGVG+NL+DHPAVT+  +I  P+S+ D++ +  +        LRW LTG+GPLT+PGC++GAF KT       ++Q RF+ GRG+ PDGV+SY  +G   RP SG+TLQVV IR KS+G + L S DP + PRI   YL   EDL +L  G++I REL  Q AF  ++ +EVFPG   + + +LD YI+ ++H+ANALVGTCKMG   D  AVV+PE +V GV GLRVVD+SVMP IPGGQT + T M+AEKAAD++
Sbjct:   37 LQSFVTANYGVRRAISLRGGLQSVSMKAPAAVASST----YDYIIVGGGIGGCVLANRLTESGRFKVLLLEAGKSAERNPYVNIPAGVVR--------LFKSALDWQFESAPERHLDGKEVYLVRGKAMGGSSAVNVMLVHRGSASDYAKWEAEGAQGWGPEEALRYFKKMEDNLVGGEGRWHGQGGMYPVDDVKYQNPLSKRFLQACEEYGWRANPDFNDWSHPQDGYGSFKVAQKHGKRVTAASGYLNKAVRRRPNLDILSEALVTRVLLEGEGNVKAVGVEFTGKDGKAHQVRTMGKAGEVLLAGGAVNSPQLLMLSGIGPEADLEAVGIATKVNRPGVGENLQDHPAVTIAHNITRPISLCDDLFLFHTPVPKPHQVLRWTLTGSGPLTTPGCDHGAFLKTREDLQEPNVQFRFIAGRGSDPDGVRSY-IMGGSARPLSGLTLQVVNIRPKSKGKLTLASKDPLKKPRIEVRYLSAAEDLQALRTGMRIGRELIKQRAFADILDEEVFPGPAAQTDEELDAYIRDSLHTANALVGTCKMGSVEDRNAVVDPECRVIGVGGLRVVDASVMPVIPGGQTGSGTTMLAEKAADLV 619
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A7S2D7X4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7X4_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 2.980e-167
Identity = 276/568 (48.59%), Postives = 374/568 (65.85%), Query Frame = 1 
Query:  238 VPSMSAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSV-FDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVE----GWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQK-NDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRI-ANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDI---NEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPG---KDNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            VP M      + YIIVGGGTAGCVLANRLT      VLVLEAGS  +  + I++P G+LR         F++  FDW + S+K       SIYLCRGK+LGGSSCTNV+LY+RG+++DYD W  +     W+G   LPYFKKAE++       FH +GG + V + RY NPL+K F  AC +AG  + N DFNDWS  QEG+GRF V ++NG R S+A  YL+ AMGRKNL +  +AQ  KI      A+GV+ IQ G K + A+LA GGEVLL+GGA++SP  L+LSGVGPAEHL    IEV  DL GVG+NL+DHPA  V  +    ++ +S T ++ + G+G  N +   +WL + +G LTS GC++G F+KTSAA  + DLQ+RF+  +  SPDG+ S+           G + Q +A R+ S G V+L S++P +  ++ T YL+   DL+++  G+K+ R++    AF    G+EV+PG   + +  LD YI+ ++H++NALVGTC+MGV SD  AVV+ ELKV GV+GLRVVD+SVMP IPGGQT + T M+AEKAADM++
Sbjct:   65 VPRMGGPSGEYDYIIVGGGTAGCVLANRLTEDGTKRVLVLEAGSASYMNKLIRIPAGVLR--------TFKNPKFDWIYDSEKSAECHDRSIYLCRGKLLGGSSCTNVLLYNRGDKSDYDGWAADYNLKQWSGDQCLPYFKKAEDDYRGDSPEFHGQGGAIAVSDVRYQNPLSKTFLAACAEAGASRFNSDFNDWSVGQEGYGRFSVMERNGERSSSAKEYLEPAMGRKNLQILQNAQVGKINFDGKAASGVD-IQLGNKAVSASLAAGGEVLLSGGAINSPQTLMLSGVGPAEHLAAHGIEVVKDLKGVGENLQDHPAAVVSFECTPEHKGISPTSKIRIGGTGLTNPLPIAKWLTSKSGVLTSTGCDHGGFFKTSAAGDSPDLQMRFLAAKAVSPDGMGSFTNFRKTAGHADGFSFQSIAARAHSRGSVKLASNNPADKAKVETGYLRDERDLETIREGLKLGRKIAASPAFDTYRGQEVYPGAHVQSDADLDAYIRGSIHTSNALVGTCRMGVASDSDAVVDEELKVHGVTGLRVVDASVMPRIPGGQTGSSTFMVAEKAADMIL 623
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A8J4D978_9CHLO (GMC_OxRdtase_N domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4D978_9CHLO)

HSP 1 Score: 506 bits (1303), Expect = 4.430e-165
Identity = 287/596 (48.15%), Postives = 381/596 (63.93%), Query Frame = 1 
Query:  190 IRNREPLNFPSLRKAAVPSMSAVK-------EGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDGRA----TGVEYI--QDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEP----VSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRP----PSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGK---DNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNP-ELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            I+  +P + P+LR        AVK       E   YI+VGGGTAGC+LAN+L+A     VLVLEAG P  +A ++ +P GI R   H        V DWG  S  +  + +  IYL RG++LGGSS TN  LYHRG  ADYD+WG+EGWT KDVL +F KAE         FH + G M VE  RY N L   FF+A   AG+  N DFNDWS  QEG+G FQVAQK   R     +YLK A+GR+NL V T A+TTK+ ++ G A     GVEY+  Q GE+  A LAPGGEVL+  GAV +PH+L+LSG+GPA  LLE  ++V ++LPGVG NL+DHPA  V++  ++P    +SIT E+  +  G +     L++L    GPL + GC++GAF +TSAA +  DLQ+RFVPG    PDGVK+Y   G   +     P G+TLQ++AIR+KS+G + L++SDPF +P I  NY    EDL +L +G++IARE+  QE  + ++ +E FPG+    +  ++EY++ TVHS NALVGTC MG      AVV+  +LKV GV GLRVVD+SV+P IPGGQT A T+M+AE+AA +L+
Sbjct:   11 IKGAKPCSRPALRTGVSRRSIAVKAAATLQTEKFDYIVVGGGTAGCILANKLSADGSKKVLVLEAG-PSGDAMEVAVPAGIARLFAH-------PVLDWGLSSVTQPQLVAREIYLARGRLLGGSSGTNATLYHRGTPADYDSWGLEGWTSKDVLDWFIKAECYADGPRP-FHGQSGSMNVEQPRYQNVLHDEFFRAAAAAGVPANPDFNDWSRPQEGYGEFQVAQKKAERADTYRTYLKPAIGRENLKVVTGARTTKVHVEKGSAGPLARGVEYVTKQFGERYTAGLAPGGEVLMCAGAVHTPHLLMLSGIGPASTLLEHGLDVVANLPGVGANLQDHPAA-VLAVRSKPEFAGLSITSEIY-DAKGNIRPGAVLKYLFGRNGPLATTGCDHGAFVRTSAAHSQPDLQMRFVPGCALVPDGVKAYVAFGELKKRGCAWPGGITLQLLAIRAKSKGSIGLKASDPFTDPSININYFSDPEDLATLRNGVRIAREIVAQEPLRKLLEEETFPGERITGDTDIEEYVRRTVHSGNALVGTCAMGTSPGSGAVVSSADLKVYGVKGLRVVDASVLPRIPGGQTGAATVMVAERAAALLL 595
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: D8TNQ4_VOLCA (GMC_OxRdtase_N domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TNQ4_VOLCA)

HSP 1 Score: 505 bits (1301), Expect = 1.000e-164
Identity = 287/577 (49.74%), Postives = 372/577 (64.47%), Query Frame = 1 
Query:  226 RKAAVPSMSAV-KEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDG----RATGVEYI--QDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDIN---EPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGT---QGRP-PSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGK---DNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNP-ELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            R  AV + ++V  E   YI+VGGGTAGCVLAN+L+A+    VLVLEAG P  +A ++ +P GI R   H        VFDWG  S  ++ + +  IYL RG++LGGSS TN  LYHRG  ADYD+WG+EGWT KD+L +F KAE         FH + G M VE  RY N L   FF+A   AG+  N+DFNDWS  QEG+G FQVAQKNG R     +YLK AMGR NL V T A+TTK+ I+      RA GVEY   Q GE+  A L PGGEVL+  GAV +PH+L+LSG+GPA  LLE  ++V S LPGVG NL+DHPA  +        E +S+T E+  +    +     +++L    GPL + GC++GAF +TSA+ +  DLQ+RFVPG    PDGVKSY   G    QGR  P G+TLQ++ IR+KS G + L+++DPF NP I  NY    EDL +L +G++IARE+  QE  +  + +E FPG+    +  ++EY++ TVHS NALVGTC MG      AVV+  +LKV GV GLRVVD+SV+P IPGGQT A T+M+AE+AA ML+
Sbjct:   33 RPVAVKAAASVGSEKFDYILVGGGTAGCVLANKLSANGSKKVLVLEAG-PTGDAMEVAVPAGIARLFAH-------PVFDWGMSSLTQQQLVAREIYLARGRLLGGSSGTNATLYHRGTPADYDSWGLEGWTSKDLLDWFVKAECYGDGPRA-FHGQSGSMNVEQPRYQNVLHDEFFRAAAAAGLPANEDFNDWSRPQEGYGEFQVAQKNGERADTYRTYLKPAMGRDNLKVMTGARTTKVHIEKSSTGPRARGVEYATQQFGERYTAELTPGGEVLMCTGAVHTPHLLMLSGIGPAPTLLEHGLDVISSLPGVGANLQDHPAAVLAVRAKPEFEGLSVTSEIY-DSKCNIRLGAVMKYLFGRRGPLATTGCDHGAFVRTSASHSQPDLQMRFVPGCALDPDGVKSYIVFGELKKQGRAWPGGITLQLLGIRAKSRGSIGLKAADPFINPAININYFSDPEDLATLKNGVRIAREIVAQEPLRKYLLEETFPGERANTDKDIEEYVRRTVHSGNALVGTCAMGTTPASGAVVSSADLKVFGVDGLRVVDASVLPRIPGGQTGAATVMVAERAAAMLL 599
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A836C4N3_9CHLO (GMC_OxRdtase_N domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C4N3_9CHLO)

HSP 1 Score: 499 bits (1285), Expect = 1.220e-162
Identity = 285/571 (49.91%), Postives = 366/571 (64.10%), Query Frame = 1 
Query:  238 VPSMSAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWGVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDG----RATGVEYI--QDGEKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDIN---EPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGT---QG-RPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPGK---DNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            V S+ A  E + YIIVGGGTAGCVLANRL+A     VLVLEAG P  +A ++ +P GI R   H        V DWG  S  ++ + +  +YL RG++LGGSS +N  LYHRG  ADYDAWG+EGW+ KDVL +F KAEN     +  +H + G M  E  RY NPL   FF+A   AG+++N DFNDWSHSQ+GFG FQV QK G R  A  ++L+ A+ R NL V T A++TK+  + G    RA GVEY   Q GE+  A+LAPGGEVLL  GAV SPH+L+LSGVGPA  L E  I + +D+ GVG NL+DHPA  +        E +S+T E+  + S  +     L +L+   GPL + GC++GAF +TSAA A  DLQLRFV G    PDGV+SY   G    QG R P G+T+Q++AIR+KS+G V L+ SDPF +P I  NY Q   DL +L   +KIAR++ +QE  K  + +E FPG     +  ++EY++ TVHS NALVGTC MG       V    LKV GV  LRV+DSSV+PSIPGGQT APT+M+AE+AA  L+
Sbjct:   23 VVSVRAAAEKYDYIIVGGGTAGCVLANRLSADGSKKVLVLEAGPPG-DALEVAVPAGIARLFGH-------PVLDWGMSSVTQKQLLAREVYLARGRMLGGSSGSNATLYHRGSAADYDAWGLEGWSSKDVLDWFIKAENYAEGPKP-YHGQTGPMHTEQPRYQNPLHDEFFRAAAAAGIKENPDFNDWSHSQDGFGEFQVFQKKGERADAYRTHLRDALKRGNLKVVTGARSTKVATESGAGGPRAVGVEYAMSQFGERTSAHLAPGGEVLLTAGAVHSPHLLMLSGVGPAATLAEHGIPLVADVAGVGANLQDHPAAVLAVRAKPEFEKLSVTSEIY-DDSCNIKLGAVLNYLINRRGPLATTGCDHGAFIRTSAAHAQPDLQLRFVAGCALDPDGVQSYKVFGDLKKQGKRWPGGITMQLLAIRAKSKGHVGLKGSDPFASPAIDINYFQDPADLATLKAALKIARDIANQEPLKKYLEEETFPGSRASSDEAIEEYVRRTVHSGNALVGTCAMGA-----VVAADSLKVHGVEALRVIDSSVLPSIPGGQTGAPTVMVAERAAQALL 578
[Close]
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Match: A0A7S0NVI0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NVI0_9EUKA)

HSP 1 Score: 495 bits (1275), Expect = 8.520e-161
Identity = 270/565 (47.79%), Postives = 363/565 (64.25%), Query Frame = 1 
Query:  250 SAVKEGHQYIIVGGGTAGCVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRSVFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAW---GVEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFFKACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGRKNLDVQTSAQTTKIVIKDG----RATGVEY-IQDG-EKRIANLAPGGEVLLAGGAVSSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEPVSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAASDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQLRSSDPFENPRITTNYL--QKGEDLDSLTHGIKIARELFHQEAFKGMVGKEVFPG---KDNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSGLRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLM 1902
            + + E + Y+IVGGG+AGCVLANRL+A   N +LVLEAG        +++P  + +        LFRS  DW ++++         +YLCRGK+LGGSS TNVMLYHRG  AD+D W   G EGW  ++VLPY++  E+ +   E ++H  GG + V++  Y N L+K F KA  Q G + N DFNDWS  QEGFGR++V Q++G RCSA SS+L  A GR NL V+T A  T++V   G    R TGVE+   DG E  +  LAPGGE LL  G++ SP +L+LSG+GP  HL EK I V  DLPGVG+ L+DHPAV V  +  + V +TD++ + G+G  N +T  RWLL   GPLTS  C++G F++T+      DLQ+RFVP    SP G+ +       G   SG + Q++A R +S G V+LR S     P +   YL  +  +D+ +L  GIK+AR+L   EAF    GKEV+PG   + N Q+D YI+S++HSANAL  +C+MG  SD MAV++PEL+VRGV GLRVVD+S MP I GGQT APT+M+AEKAADM++
Sbjct:   44 ATMTEEYDYVIVGGGSAGCVLANRLSADPANRILVLEAGGDNGGDLRVRVPAALPK--------LFRSECDWDYETEPGSI--EHEVYLCRGKLLGGSSNTNVMLYHRGTAADHDEWEAAGAEGWGAEEVLPYYRMHEDFQGG-ESQYHGVGGGLAVQDVPYQNLLSKAFLKAAGQMGFRANSDFNDWSAPQEGFGRYKVMQRDGERCSAQSSFLALAKGRTNLCVRTGAHVTRLVATGGTAEPRVTGVEFTFTDGSEVHMVRLAPGGEALLCAGSIQSPQLLMLSGIGPCAHLEEKGIRVVKDLPGVGEGLQDHPAVLVAYESTKKVCLTDDIKLFGTGMTNPLTTARWLLARKGPLTSVACDHGGFFRTTPDLEQPDLQVRFVPALAQSPSGMSTLVKYSQGGSMKSGFSTQLIACRPRSSGRVRLRDSHHHTKPLLEDVYLSAEGDDDVKALREGIKLARKLVDTEAFDNFRGKEVYPGAAVRTNEQIDAYIRSSIHSANALTSSCRMGAASDPMAVLDPELRVRGVRGLRVVDASAMPQIIGGQTCAPTLMLAEKAADMIL 597
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW40_ECTSI8.480e-31677.60GMC_OxRdtase_N domain-containing protein n=1 Tax=E... [more]
A0A835Z8N3_9STRA7.790e-21056.55GMC oxidoreductase-domain-containing protein n=1 T... [more]
A0A7S2USP3_9STRA6.290e-19151.84Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6V1RKB3_HETAK1.180e-18252.72Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A4D9DA48_9STRA6.850e-16847.32GMC_OxRdtase_N domain-containing protein n=1 Tax=N... [more]
A0A7S2D7X4_9STRA2.980e-16748.59Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J4D978_9CHLO4.430e-16548.15GMC_OxRdtase_N domain-containing protein n=2 Tax=V... [more]
D8TNQ4_VOLCA1.000e-16449.74GMC_OxRdtase_N domain-containing protein n=1 Tax=V... [more]
A0A836C4N3_9CHLO1.220e-16249.91GMC_OxRdtase_N domain-containing protein n=1 Tax=E... [more]
A0A7S0NVI0_9EUKA8.520e-16147.79Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig823contigA-nodosum_M_contig823:110452..128944 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW40
PFAMsGMC_oxred_C,GMC_oxred_N
Model size2942
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons16
Evalue0.0
EggNOG OGsCOG2303@1|root,KOG1238@2759|Eukaryota
Descriptionflavin adenine dinucleotide binding
Cds size1914
COG categoryE
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870154.617167-UTR-A-nodosum_M_contig823:110451..1104541680870154.617167-UTR-A-nodosum_M_contig823:110451..110454Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 110452..110454 +
1680870155.1179938-UTR-A-nodosum_M_contig823:127919..1289441680870155.1179938-UTR-A-nodosum_M_contig823:127919..128944Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig823 127920..128944 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870154.7104125-CDS-A-nodosum_M_contig823:110454..1107871680870154.7104125-CDS-A-nodosum_M_contig823:110454..110787Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 110455..110787 +
1680870154.861092-CDS-A-nodosum_M_contig823:114837..1149411680870154.861092-CDS-A-nodosum_M_contig823:114837..114941Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 114838..114941 +
1680870154.8744648-CDS-A-nodosum_M_contig823:118380..1184681680870154.8744648-CDS-A-nodosum_M_contig823:118380..118468Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 118381..118468 +
1680870154.8859668-CDS-A-nodosum_M_contig823:119944..1200701680870154.8859668-CDS-A-nodosum_M_contig823:119944..120070Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 119945..120070 +
1680870154.8979437-CDS-A-nodosum_M_contig823:122033..1222161680870154.8979437-CDS-A-nodosum_M_contig823:122033..122216Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 122034..122216 +
1680870154.9097302-CDS-A-nodosum_M_contig823:122436..1225411680870154.9097302-CDS-A-nodosum_M_contig823:122436..122541Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 122437..122541 +
1680870154.92334-CDS-A-nodosum_M_contig823:122953..1230401680870154.92334-CDS-A-nodosum_M_contig823:122953..123040Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 122954..123040 +
1680870154.9333563-CDS-A-nodosum_M_contig823:123793..1238771680870154.9333563-CDS-A-nodosum_M_contig823:123793..123877Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 123794..123877 +
1680870154.9447596-CDS-A-nodosum_M_contig823:124253..1243171680870154.9447596-CDS-A-nodosum_M_contig823:124253..124317Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 124254..124317 +
1680870154.9573805-CDS-A-nodosum_M_contig823:124688..1247681680870154.9573805-CDS-A-nodosum_M_contig823:124688..124768Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 124689..124768 +
1680870154.9685001-CDS-A-nodosum_M_contig823:125142..1252501680870154.9685001-CDS-A-nodosum_M_contig823:125142..125250Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 125143..125250 +
1680870154.9777055-CDS-A-nodosum_M_contig823:125623..1257221680870154.9777055-CDS-A-nodosum_M_contig823:125623..125722Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 125624..125722 +
1680870154.9894688-CDS-A-nodosum_M_contig823:126075..1261731680870154.9894688-CDS-A-nodosum_M_contig823:126075..126173Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 126076..126173 +
1680870155.0041375-CDS-A-nodosum_M_contig823:126474..1265891680870155.0041375-CDS-A-nodosum_M_contig823:126474..126589Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 126475..126589 +
1680870155.0151925-CDS-A-nodosum_M_contig823:126982..1270901680870155.0151925-CDS-A-nodosum_M_contig823:126982..127090Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 126983..127090 +
1680870155.1040838-CDS-A-nodosum_M_contig823:127787..1279191680870155.1040838-CDS-A-nodosum_M_contig823:127787..127919Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig823 127788..127919 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig823.14.2prot_A-nodosum_M_contig823.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig823 110455..127919 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig823.14.2

>prot_A-nodosum_M_contig823.14.2 ID=prot_A-nodosum_M_contig823.14.2|Name=mRNA_A-nodosum_M_contig823.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=638bp
MSIVSRKNVLFMLPSQSPLKLLLSLQSTFFSESSSAHLPNSQYVEHAQLQ
DFLNLQRSSTNSIRNREPLNFPSLRKAAVPSMSAVKEGHQYIIVGGGTAG
CVLANRLTAHKDNSVLVLEAGSPKFNARDIKMPIGILRHGVHGTVELFRS
VFDWGFQSDKEEFITSDSIYLCRGKVLGGSSCTNVMLYHRGEEADYDAWG
VEGWTGKDVLPYFKKAENNRSKKEGRFHNKGGLMQVENARYMNPLTKRFF
KACEQAGMQKNDDFNDWSHSQEGFGRFQVAQKNGRRCSAASSYLKQAMGR
KNLDVQTSAQTTKIVIKDGRATGVEYIQDGEKRIANLAPGGEVLLAGGAV
SSPHVLLLSGVGPAEHLLEKNIEVKSDLPGVGKNLRDHPAVTVMSDINEP
VSITDEVLVEGSGAVNKMTALRWLLTGTGPLTSPGCENGAFYKTSAAKAA
SDLQLRFVPGRGTSPDGVKSYNTIGTQGRPPSGVTLQVVAIRSKSEGVVQ
LRSSDPFENPRITTNYLQKGEDLDSLTHGIKIARELFHQEAFKGMVGKEV
FPGKDNLQLDEYIKSTVHSANALVGTCKMGVESDEMAVVNPELKVRGVSG
LRVVDSSVMPSIPGGQTAAPTIMIAEKAADMLMPASS*
back to top

mRNA from alignment at A-nodosum_M_contig823:110452..128944+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig823.14.2 ID=mRNA_A-nodosum_M_contig823.14.2|Name=mRNA_A-nodosum_M_contig823.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=18493bp|location=Sequence derived from alignment at A-nodosum_M_contig823:110452..128944+ (Ascophyllum nodosum dioecious)
GTCATGAGCATAGTGAGCAGAAAAAACGTTCTGTTCATGTTACCCTCGCA
ATCGCCTTTGAAATTGCTGTTGAGTTTGCAGTCCACTTTTTTTTCGGAAA
GTTCGAGTGCCCACCTTCCCAACAGTCAATACGTAGAACATGCTCAACTT
CAAGATTTCCTCAACCTGCAAAGATCATCTACTAATAGTATTAGGAATCG
TGAACCCTTAAACTTTCCATCTCTGAGGAAAGCGGCGGTACCGAGCATGT
CTGCCGTAAAAGAGGGCCACCAGTACATCATCGTCGGTGGAGGAACGGCG
GGATGTGTGCTGGCGAACCGTCTGACAGCCCATAAGGTGGGATAAATTAC
CCTGTCTTGCTCTTCACTCATAGCGTGTTGCGAGCGCGTTGATAACGTGT
CTTTGTACCACTGCTCCCTTTGCTCCCCTATTCGAGTCTAGAGGTACGAC
TATAGAGCATATCCTACCACTATTATACAGTACAGTATTCATGTTACCGT
ATGAGCTGTCGACGGAGCAGGATTGGCAAGCTTACCCGGTTGGTCCATAC
TCTGCTACATGCCATGACCATACATATGAGGGTATGAGACCATGTGTTCA
CGCGCGAAGGGGATGCCGGAGTCCACCGCCACATTCAGCGTAGAGGCAGC
GGGTCAGGTGTACAACCAGACGAACGATTTTGTATACCTCGGGGGAAACG
TCAACCACAACGCCGACCTGACCATCGAGGTCGACCGGCGCGTACGCAAC
GCATGGTGCAGCTTCCGGAAGTACACCCTCGAACTGTACGACCGACCGAG
CGCTCCCCTCGAGCTCAAAATCCGGGTGCTAAGAGCCGAGGTACTCGAGA
CAATGCTGTACGGCTGCGTCACGTGGAGCCCGCGCGCGTGCCACTAAGAC
ACGCTGCGCCGAGCCCACCACAGGTTCTTGACTCGCTGCGTCGGTTGGCG
AAAGCACAATCGCGCCGACCACCCGATTTCCTATCTGGACACGCCTGTCA
AGACGGGAAGTGAGAGCATCGAGGCGACTCTACACAGAAGTCGGATCTTG
TTTGCGGGATTTGTGGCGCCCATGGAGGATACGAGACTGCCGAAGTGCGT
GATGTTCGGAGAAATGGTGGGGGGCGCGGGCTGTGTGGGGGGCCAGGAAA
AAGAGTGGATGGGATGTTTCCTGGACGACCTCAGAGCTTTCGGCATCAAC
GCCGACCAGTGGACGACTGCAGCCCAGGACGAGGGGGGATGGCGCAGAAC
GGCAGAACAAGGGGCGGAACATTTCATGGCAAAATGTATCGCTGCAGAAA
AAAACAAGGCTGGACTACGGCATGCAGTCGTATGCCCGAACGTGGCGGGA
AGAACCAAGGAGAGGATAGCCCAAAGCAAGCGGGCTCGTGCTGGTTCGCT
CGCCCTTGTTGACTAGCCACAAGTGGCGCGAACTTGTGCCCTCCGGGCGT
TTGGTTTGCAGATGTCATGACGTCTTTCTCTGGTGTTACGTTTGTTTTGT
TTTGCTTCGTTTTCGTCTTTATGCTTTCGTTGAAGCCGCGGCCCTTCGTC
CAATCGCCCTTCAATATGCAGGCGCCCCGATAGCCACACGTGTTTTTTTT
TTTTTTTTGGCGATGTCACTTTTTCCGAATATTTTTTGTACCATTTCCGC
TTTCTCTTTGTATGGAGAGTACGTCGTACGTTCTTTCCTTCCGAATGATG
TTTTTCTACCTTGTGACCACTGGCTGGATTTTTGACATCAGCTTATGTGA
GAATCCAATCAAATTCAATCAATCGTGGATCAACCGGGTAAGGTTGCCAA
TCCTGTTCGTGGTCAGCTGAACGGGAAAAATGATATTTTCCCTGTCCCGT
TCGCGCCTGCGAATTTGGTCTCGTGAGAAATGTTCGGCCGTCCCGTCCCG
CGTCAGCCTGCTCATTCTCCACACTCAGGCTGAATTTGGTGCCTACTCAC
GGGATTCCTCCCGTTTTCCGCGACAGCGTCCATTTATGTGTACCGTCATG
TTTACCCCCAATCGGTTTCCCCCCGCGTGTCGCATCAGTGTAGTACTTAG
TACAGTATATAATACTGCTATAAAATCCCGCCTATATTACCACACATTCC
ACTGTAACAGTCAATGTTTCTAACCAAACGTTTCGATGAAGTTTCCTCGC
GGATGATCGGAAGGCTTCGATGCGTTCAGACTTTATCTTCAGAAAACAAG
AACATTTTATAACAAACGCAAAACGGCTACTCATTCCCACCATTCCTCCT
GTGTGACCCCGGCTGGTACCGCAGAAAAAAGGTGGAGAAACCCTGTGTGA
CCCCGGCTGGTACTTCCACAAGCCTGACGTCCAGAATAAATGGGACGACA
ACACACAACACACACACACACACATCTACTGTATATCGTGTTCCTCTACT
AATAGTCGGACGCGGCCTCATTCATTAACATATCTTCTACATCGAGTTCG
AGTTCTTGAGGCCGTAGATTAGTTTTGCCACACAAGTTATTGGATACACC
GTGTGCCGGGGCCATTCTGGCGAAAGCCCGCGTTATACTTTGTTCCTTGA
TAAAATCTAATGAAGGCCAGAATTCAGACCATTTCCAACTACGGGCGAGA
TTTACGATTCACAATATCCGACCCAACCCGATTGGGGTTCGGGAAACTAA
TATTAATAATAGTGGTCGGAAATCGCTTCGGAAAATGAAGACTGACTGCA
GCACTTTGGTGGCTCCATCAAACAAGCAACCTTTTAATGCTGTGGAAAGA
GAATCGGGAGCACAAGGATAGTGAACCTCGGCAAGCGATGATGGGATGGA
CGACTGATAAATATTAATAGTAACCCTCGGAAGACTCAACGAGTAACGTT
GTAGTGATAGCTGCTGCAACTTTCGTTTTGACCGAGAATACTTTGACGAG
CAAAGGACAGAGACATGGAGGCAAGCATTTTTGTGCCATCGATACTCAAC
GGTCTTGACGGCGACGGAGACGGCGAGGCTTTTTTTACTTGCAAGGTGTT
TAAGTACGCGAACTCTCATTTTGTAACCCCCCCAAAGAGGTGTCTGTAAA
GTTACTAATAATATCGGAAAGCGCTTTGAAAAGAAACACCAAAAAAGAAA
CAGGAACCGACCAACCGTAGCAATTCTGTTGGGTTCTCTCTCTTGCCTAG
ATATTGGTTGTAAATAGTACTGGTACAGATTTCCTATCCCAAGAAAATAT
ATAAAGTTGTGAATGCACCTTCTGCTCTGGACCTCAAGAACGACTCGTAA
GCTGCCTATTAATAGCGATACCTGGTATTAAGAGGAAACATATCTTTGTA
ATTTTTGACGAGGTATCCTGCGATGTGACCCATTTTCCCCAGTTTTTCCC
CTCACGTCCCAAAATTTCAGCTTTCAAACGCCGAAATATTGATTGTCCAT
TACCTCTACACTCTTTGTGGAAAACAGCCGGCGCATTTTTCAACCTGTCA
CTGAGATCGCCCCCCGAGTGGTCGGTCAAACAGATACTCTGTGGAAAACA
AAGGTTTGAAACTTGTGGGTTCGAGTTTCAGCAAGGCGATCCTTTCTTTC
TTGATTCCCGGACACTACACACTAGCAGTACAGTATACCGTGTTAGCAGT
ACAGTTTACCGGTGTTAGCAGTACACTACACACTAGCAGTACAGTATACC
GGTGTTAGCAGGACACTCGCACAAAAGAAAAGTGAAAACGTGGGTAACCA
AAATCCAACCGCTGGTTGACGAGGACGAGTGCTGAACTTGAATCGGGATA
AAAAGGCATGATCCTGTAATAGGCGTTAACCGGGGAGAGATGGGTAGATA
AACCTCTTACAAATGTTAATGGTTTGTTAATCGGACCACAGGCGGATAGG
TAGATATAGGTAGCATTCCTATTACTAACTGCACTGCATCACATTATTAT
TGTTATTATTATTATTAATTTTATTATTATTATTATTATTATTATTATTA
TTATTATTAATTTTATTATTATTATTATTATTGTTATTATTATTATTATT
GATGATAGGCTCCATCGACATGAAGCAAGAAAGAACTCACGAAAACTGTG
CAATTCTGGGGGAGGGAAATGGACTTGTTATATTTATGTTTGCGCCCAGG
ATCATATCGCAGCAATAAAACCTTCAGTTATTATTAAAATAAGTAGAAAA
TACTGTTAATATTTGATTAATAGCAAAGCGTTTCACGGCTGTCTTTCTCA
AGACGTGCGTTTCTTCCACCCACCTCCAACTGCACTGCTTTCCATCGTCA
CCAATGTGATCATCGTCATGAATGCCGTCATTCTCACCATTGTCGTCATT
GTCATCAATGCCGCCGTTCTCATCATAGTCCTGACTGTCGTCATTCTCAT
GATCGTCGTCATTCTCATGATCGTCGTCATTGAAAGGATAACTCGGTTTT
GGTGCTGGAGGCCGGCTCGCCCAAGTTCAACGCAAGGGACATCAAGATGC
CAATTGGAATCCTCAGGCACGGCGTTCACGGTACTGTAGAGTATTCGATT
GACGGTACGATACTGTACTGTGTTTCCCTGCTTGATTCAGGTCTCTGGTC
TGAAGATAGTACATATCGCAGAAACTGTTTTTTAGCCCCAGCTCGCATAG
CCCAGTAGGTAACATTAAAGAGTTGTACTATTAAAATTAATACTGTGCAG
AATGTTAGTTACATGTAGGAGAGTTTGACTCTGGATTCCGTAGCTGAGAG
CATAATAATGAGATAAAATGAAGCTCAACCACTGTTAATATGTAGTTATA
GTTGACTAATACGAGGTGTATGTACACTAGAGCTAATACTGTAGAGCCTG
GTAGGAGTGCTAAACTTGCGTCGCGATAAAAAATCCCAGACGTGAAGCGA
GTAGGCGAGGTGGGAGGATCCCTAGATAGATATCCATCCCTAGATAGATA
TCCCTAGATGTACAGACCACAGGCGCGGTGGGCAAAGTTGCAATAGGGGA
GATTAGTAACCATTTAGACCTAGTACGAATTGTTTGGCCCCATCGACAGA
AAAATATTTGCAAACAAACAATCCTATAATTTCGTCTTTTCGTCTCCCTA
ACTAGCCGTAAATCTGAAACGGCCATATATACTGTAACGATATGACCGCT
TTTTTCGCCGTAGCCATATCGCGACGTGTCCATTAGATTGCCAATATTGA
CTTTCAGGTTCCGGGGTGATATACAGTACTCGTATAGGTATAGCATAGGC
TCTAGCCATGATGGTGCATTTGTTGAACTGATGCTCCTTCTATATTCCGG
AGAACACAGCACGAACATACAGCTGTGGCGGGGGTGACGCGTTTGCTTGT
AGGGATATGCATTTCTCATCATACTATGATACAATACTTGGCTTATTTTA
CCCCGCCAGGTGTGTACCCATTTTGCATACCGACGTTTATGTCGAGTTTT
TGGGTTTCGTTGTCAGGAACAGACACAACGGTTCCAAACACCCACCTACC
TTTTTCTTTTCGCGGCTGTGTCGCTCGGGATAGACTGGTTTGCAGGTAGT
TCAGAGGTTGTCGAGAGGAGGTGCAGGTGTTGCGTATTCGCTGTCATTTT
TTTTCATAAGAATACGGAGGCATTATTTCGTTTTTGAAATTGATTTTTTG
AAATCGACGCACAAAAAACATGCGTAGTACTCCGGGTACTTCCTACCTGA
CAAGTAGAAAATTATTGTTATTTTTACAAGACTGACAATTATTGATATTT
TTACATGATTTTTGTTCGTAACATTAGAAATCTCGATCCGATCGTAAAAC
CATGTAATCAAGATCAAGATGCCTGCATGAGGTTCGCGGTTCAGAATATC
GGCAAGTTGACCACCTCAAATACGCCCAAAGGAAAAGCGTAAAAAGCGGT
TTTAACTTCATCTCTACGTATTAATAGTATAGCTTTAGCTCTATTAAGAG
GCCTGTAAAACAGAGAGAGGTTGTTGTTTATTAAAAAAACTGAAGTAACT
AACGCGTCCAAACTTTCCGAGCATCCTCCGTCAGGTGGAACATTACTAAA
TTAATGTCCTGAAACGCTTCGTTGGAAACATCGCACATCGACCCGCTGTT
ATTGATAGCACAATAACTCTACTGTACTGTACACGAGATTCAATCGAGTG
TTCCCCCAATGTTGATCCCATCAGGTCAACAACATCATATCGGGGAGAAC
CACCCACCTTCATGCTGTACACTATAATAACATTCAATTATTAATCGCCA
TGTGTAGGGACACAGCAAAAGCAGGGACGTTAAGCAGGACACAATGATTT
TGGTCCTATCCTCCGTAACAGTTCAATAAAATGCATTACACGTTCGACAC
GTTTTTTAGTTTATGTACAGGGTATACTGTATCACAGAGGAGAACCACCT
CTTGGATCTTGAGCCTAATCCAGTAGTCTAGATACCAGAAACCGTTACTC
GCACGTGTTTATCTGTTTAGTAGTCGCGATAAAAAATTGTAAGGCGTGAA
CCGGGGAGAGATGGGAAGATCCTTTGTGACCACAGGCAGGATGGTAATGA
TGAGGTCCATCGGCTATAAGTGAGATGAAAGAAAGAAAAAAGAAAAAGAG
TCGTAGGGCAGCGACAGGTAGACTATTAATAGACGTGTGAAGAAAGAAAG
AGAGAGGTACACAACAGGTACAGTATTAATAATATGAATAGGCGAGATGG
TGCCAAAGCCACTGGTCAAAGGCACTCTTCCCCGTCTGCTCAACAGAAAA
GTCCCTGCGCAACACACGACACCGAAAGTTGTTATGATAGAGCTACCATC
TGAGGAAGAGAGAGGAAGACACTGACCGGAGGCGCCTGTCGTAGCTTGGG
GAGCATCACCCCTGCGTTGGTGCCTACTTCGAATGTAGTATAGGTACTAT
GATACTTGTATTGCAGAGGAAAAACAAACTCCTCGTTCCAAGGTCGTTGA
CGTAGTAGGCTCCTAGCTCTTAAAATTGTGGACGAGCTCTTCATAGTGCC
TAAATTAGGACTATTAATATTAATAGTACTTTTCAAAGGTTTTGCTGTGT
TCAATTCTGCTGAATCAAGTTTTATACTGCTGTAGCAATAAAAAGCTCCA
GGTGACCAAGACCTATACCAGCCATGCCCGGTAGACTCTAATTCATACTA
TTTAATAGATACCTGGTAAGTCAGAGCTTTTTATCTGGGGCTTTCTACGA
GTGTCGAATCTGCTTTGGTGGTATTCGCCAACTCTTTCGCATTTATAATA
CTGTATGGTATAGTCTACTCCGAGTTCGAGGTGCTGTACTATACGTAGTG
TACCATATTAAACACTAATATTTTATATTGTAGCAGCACAATTACTGGAT
ATTACTATTTCGTAGTATAATACAGTACAGTAGCTCTGTAGACCTATTAA
TAGTGTTATACTATTACATTGAAAGTGTTAATACTAGTGTATTAGTATTA
ATAGTTTTATTTTGTTGTTTTTTAGAAAACTGGAGAGTGCTGTATATACC
AGCACTGACTGTACAGATTTGTGTTACAGACGAGTCAGTTGCTCTACTAT
ACTATACTTTACTATACTATAGCCAACAACAGTACGAGTACTAGGGCTAC
AGTAATACAGTGTATACCATTATATTAAATATGTACCAGGTACTATGTAC
TATGTACTTTAAATAGTACTTCAATCAGACGAACAGACAGCGTCGATATT
CATTTTGGATTAGTAACGTAAATAAACCACCTGTAAACAACACTGTAGAC
ACTATTATAGAGAGAAAGACCGCGGATTGGATTCCGTTTTGTAGTGATGA
CTATTTCTGTAGCATCTAAACAAGTCGGTCCTGGCGATTAAAGTGCCTTA
TCACAAACATAATTTTATATCATGGTTTTGCATTTCTCCTCATACCAAAA
TCCTAAGCTTATTTTACCCCGCCGGGTGCGTCGTGTACATACCGACGTTT
TATGTCGTGCCTTTGGGTTTCGTTGTCAGGCTCTTCCGCTCGGTGTTTGA
CTGGGGTTTCCAGTCGGATAAGGAGGAGTTCATAACCTCGGACAGCATCT
ACCTCTGCCGCGGGAAGGTCAGCTCGTGGATTGCCCAAGGGAGATGTTGG
GTCAGCTGTTGTTCCGTGGTTCTAGCGTAGCTCTACAATATCACTCAGTG
TTGAAGTCGTGTGTGTATAGTCATCACATATGGTAAGGGTAAGGATCAAC
TGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAA
TGTTTCCCTGTTCTCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGT
TCGGCAGTCCCGTCCCGCGTCAGCCTGCTCTTCTCCATACTCAGGCTGAA
CCTGGTGCTTACTCAAGGGATTCCTCCCGAGTTCCGCGGCGGCGCCCATT
TATTAATTTAAACCGCCATACGCCATTGGGTCGGTCCCGAGTTTATCGGG
TCACGCAATTGCGTACCGATGTCGTTTACTGCCGAGAGTCCGCCGGCACA
GGGCCAGTAGTCTCCAAGGTAGTTCCAAACGGGTGTTGCCTTGGCAGGTC
ACCATGGACCAATAATATGCGCCTCTCTTTCACACACCTACTATTGGTAT
GAAGTGGCCATGTTAAAAGTATCGGCGTATGTATGTATGTCGCAATTGCG
TACCGATGCCGTTCACTGCCGAGGGTCCGCCGGCACAGGGCCAGTAGTCT
CCAAGGCAGTTCCAAACGGGTGTTGCCTTGGCAGGTCACCATGGACCAAT
TAAATGCGCCTCTCTTTCCCACACCTACTATTAGTATGAAGTTGGCATGT
TAGAAGTACCGGCGTATGTATGTATGTATGGTCATCACACTAAGCAAGAG
TAAGGATCAACCGGGTAAGGTTGCCAATCCAGCTCGTGGTCAGCTGAACA
GGGAAAATGGATGTTTCCCTGTCCCCGTTCGCGCCTGAGAATTTGGTCTC
GCGAGACGGGTTCGGCAGTCCCGTCCTGCGTCAGCCTGCTCTTCTCCATA
CTCGGGCGGAGTCTGGTGCTTAATCACGGGATTCCTCCCGATTTCCGTGG
CGGCGTCCATTTATTAATTTAAACCGCCATACGCCATCGTGTCAGTCCAG
AGTTTATCGGGTCACGTAATTGCGTACCGATGTTGTTCACTGCCGAGAGT
CCGCCGCCACAGAGGCAGTAGACCTCAAGGTAGTTCCGAACGAGTGCTGC
CTTGGCAGGTCATCATGGACCAATTAATATGCGCCTCTCTTTCCCACACC
CACTATCGGTATGAAGTGGTTATAGTATGTTGAAAGTACCGGCGATTGGC
GTATCAAGTATCACTTAGTAAGGTCACTCCAAGCGGAGCAGGTACAAGTC
AGGTAAGGTCACGGATCGGCAATGCCCGTTCAAGCCAAGGATGGTGACTT
GTATTGTAGTGTTCCCTACTGTACCCCGAGCCCGGTTTGGAGCATGTGCG
CCTCGAATTCCCCATACAACACTTGAATACGAGTGAAATAGACCCATGAC
TCATGACCCATTACAACCGATTAACGCACTCTCTGCAAATCAGGTTCTCG
GGGGATCGAGCTGTACGAATGTTATGCTCTACCACCGAGGAGAGGAAGCA
GACTATGACGCTTGGGGAGTAGAGGGATGGACTGGCAAAGATGTTCTCCC
GTACTTCAAGAAGGCCGAGGTGAGCCAGCCAGGCCTCATCAGGGCCTATT
TTACTGTACTGTACTGTACTGTTCAAGGTTGAGTCATAAAACAAATAGCC
CTTACTGTAGTCAGGATATGATTAATGTGTAGTAACACTCAAGCTACCCA
CCGTAATAGCAATAAGCAGATCGTGGGCGTAACCGACGACCGTCCGGCTG
TTATCCGTCATACACCTACAAGGAAGAAACGAGCTGCTACACTCTGGTAC
TTCAACATGCCCACTTCGTACCAATAGGGGCTGGGGGAAAGAGAGGCGCA
TATTAATTGGTCCATGGTGATCTGCCAAGGTAGCGCCCGTTTGGGACTAC
CTTGAGGTTTACTGCCCCTGTGCCGGCGGATTCTCGGCAGTGAACGCAAT
CGGTACGCAGTTGCGTGACCCGATAAACTCGGGACTTACACGATGGCGTA
TGGCGGTTTAAATGAATAAATGGGTGCCGCTGCGGAAATCGGGAGGGATC
CCGAGAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGACTGAC
GCGGGACGGGACTGCCGAACCCGTCTCGCGAGACCAAATTCTCAGGCGCG
AACGGGGACAAGGAAAAATACATTTTCCCTGCTCAGCTGACCACGAGCAG
GATTGGCAACCTTACCCGGTCGATTCTTACTCTTGCTATATGTGATGACC
ATACATACATACATACATACAATATATATAAAGACGGCACTGTCGGACGT
AATATGTGGCATTACCAGGTGTATATATTTAGATGTATACTGGTATTACC
TGTAACATATATCCTGTACTTGTATATTGATGACCCAATACAGTTATTGA
CGACTTGGTGAATGTCGAAGACCCTTCGACCATGCTAGAAAAACAATATT
CCCGGTTGTACTATTAATACTGTAGAATAGTGACTATTACTATTCTATAT
ATACAGTATCACATTGGGACATGAGAGATTTGTGAACTACAGAAAGACCT
TTTCCTCTCAAAAGTTTCACATCTGGCGAGGCCGTTGCCCCCCCCAAAAA
TGGCGCCGTCTTTTCAACTTCAGGAATTAATTACATTGTAGTATACTCCG
TAATATTTATAGTCTTATTAGCTCTAATAGTGTAATGGTCTACTATGGAT
AACGGTCTAGGCCAGTACGGTATGCTATATCCAAGATGCCCCCGTGGCGA
TATCACGTATACTATATGCTATATAAATCGGAATTAGACTTCCAAAGCAG
GTCGTTAGCAAAAGCTATCTACCTCTATTAATATTAGTAGTTGTTCTTAT
GAATAGCTCCCTGATACGGTACGGGGGGAGGGTATCAGAACACACCCAAG
AACTAGAAGTAGACTTTGGTCGGTTTGCATCGACAGCCCTCTTTTCAACC
CAGTTGATTTCGATGCCGATGTTGATATCGGTGTTGATGGTCCTTGGTCG
CTATCAAAGTGCAATCAATCATCAATCAGTTCACGTTTGGACTTTGACGA
AAACGATCTGATCGTTTGGCGTGGTGGTACATCGCGCTCAATTTTGGTGT
TCCGGACATCAAGTTCAAGCACACTTCCCTTCAGTTCTCGAATGACTTCG
TGCGCGGTCGATCAGAGCTCCTCGTACGTCACTGCTCAAGTCGAGGCACT
TTGCTATACCTACGACAGATGTAGCCCCCTCCGCATAGAGCTAAGCCTAC
AGCCTCCAGTGTAGAATAGCACCTGGAATGTATGTGCTATGTGCTATGCG
TTATGCAGTGTAGAGGCAGTAGACACACCACACGCATATCGCTCATCTAT
CATATATCATCTATCATATACTTCGTATCATCTATCATATACTTCGTATC
ATCTATCATATATCATCTATCATACGTATAACGCGCGAACGCTGTAGTTA
ACACTGTTGTCAATACTATTGTTGTCAATACTATTGTTGTCAATGCTGTT
GTCAATGCTGTTGTCAATACTATTGTTGTCAGAACAACCGGTCCAAGAAG
GAAGGGCGATTCCACAACAAGGGGGGCCTCATGCAGGTGGAAAACGCTAG
GTACATGAATCCTCTCACAAAGAGATTCTTCAAGGCTTGCGAGCAGGCGG
GCATGCAAAAGAACGACGACTTCAACGACTGGTCTCACTCACAGGAAGGC
TTCGGACGTTTTCAGGTGTCTTGAGAATTGTCTGTGTGTGTCTGTGTGAG
TGTGTGTGTGTGATTCCGACGTTGTGGAAATACTGCAGTGATGGAAGGAA
AGAGTCATGTTGCCGTTTGCTACGCAACATTTTCGCCAGCGGTTCGTCTG
GACGTCTGGACAATGACGATGATCTGCGACCAGGTGACGATAACGATAAC
CCTATCCGATGGATTTTTTTGGGGGGGGTTGCCAGGTTGCGCAGAAGAAT
GGAAGGCGATGCTCGGCAGCCTCGTCGTACCTGAAACAAGCTATGGGACG
CAAAAATCTTGACGTTCAAACCAGCGCGCAAACGACCAAGGTCAGGGCAA
GCAGGGTCATGTCAAGTTTAAGGGGAAATAAGTTCTGCATTGCTTGTTTG
CCACCGTTGAGTGGCAAGTGCGGTCAGTATGGCTTCGCAAGAAGTGTACG
AGATTTATGCGCGGTATACACCAACTACAATCCCCGTACATCGGAACACA
TTCATGACAATTTCTAGCTTGCTGATAGGCTGTTTTTCACATTGGCATCC
GGACAGTGCTGGTTGCTCTCGTTCTTAGCTGGGGGAAGTCGTGCCGTGTG
CTTTATCCGATCGTGTTGCAGCTCTTCGACTAGATCACATCCCGATGTCA
TTGGTCGGAGAGAGAAAAACGGAGAAGCAGAGGTATGCGAGCATGGGACG
TTTCATTAAGAAAATACTATCCGCGCTGCTCTGTTTTTATCGGGGGGTGA
AGATCGTCATCAAAGATGGCCGTGCGACAGGCGTGGAATACATTCAGGAC
GGGGAGAAGCGGATAGCCAACCTTGCTCCTGGTGGTGAGGTGAGTTCGAG
TGAGGCCACTCGCGCGCGTTCTTCTACTTTCGTCGCCGCAGATCGAGGTT
TCATGATGGGTATGAAGGAATGTCATTTTCCTTTTACGCTGCTTGATTGC
CTTATTTTattgccTTATTGCCTTATTGCCTTATTGCCTCTTAATCAGTT
CGCGTACAGTTACGTATCGCGTTCTTCTTGTGTCCTTGTATGGTCACACA
CATAGCAAAAGTATGAATCAACCAGGTATGGTTGCCAATCCTGCTCGTGG
TCAGCAACAGGGAAAAATAGTATTTCCCTGTCCGCGCTCGCACCTGAGAA
TTTGGCCTCGCGAGACGGGTTCGGCAGTCCCGTCCCATGTCAGCCTGCTT
ATCTCAATACCCAGGCTGAATCTGGTGCTTACTCACGGGATTCCTCCCGA
GTTCCGCGGCGGCGCCCATCTATTTATTTAAACAGCCATGCGCCAAGTCA
GTCCCGAGTTTACCGGGTCACACAATTGCGTACCGATGGCGTTCACTGCC
GAACGTCCGCCGGCACAGGGCCAGTAGTCTCCAAGGTAATTCCAAACGGG
TACTACCTTGGCAGGTCACCATGGACCAATTAGTATGCGCCTCTCTTTCC
CATACCCACTATTGGTATGAAGTGGGCATCCCCTCTCGAATCGAGACACG
GCAAGTCCCGAGGACAGCAGAACAAGCTCTAAAGTCTATAATCTATAGCC
TTATGGTTGGACCTGTCGTGTGTCGTGTGTCGCGTCTCTCAGGTGCTATT
GGCGGGCGGAGCCGTGAGCTCTCCGCACGTTCTCCTTCTTAGCGGGGTGG
GTCCGGCCGAGCATCTCTTAGAGAAGGTAAGTTTTGCAGTTGTTTTTCGC
GAGATTTCGGCTCTGTGTACCTTCCAGCAGCACGGTTGAGTTTACTTAGC
GTGTAGAGCCAGAGGATCCGAACGCCTGGCTACTGTACATGTCGCGGCAT
TCTTCATCAACCGGAGTCAATGTCACCACCAGGCAGAGGGTGCAAGTCTA
CCCTATTATCCCAGCACCAGTAAACTAAAAGACACCACAAGTACAGTAGT
TTGCACCTTCCAAGTTCGGAGCGAACCCTCGACGCATGAGTTTAGATATG
TGACTGCTATTAATATGAGTCTGTTGCTAATAATAGTTGATGTTAGATCG
ATCAATCGGTCCTCTTTCTTGCCGCTCTCGGTATGTGTATGTGCATGTGC
AGAACATCGAGGTCAAGAGCGACTTGCCTGGCGTGGGCAAGAACCTCCGT
GACCATCCAGCCGTCAGTGAGATATTCGTAGATTATTTCGATTGGTTCCT
CCCTTTGGTGTCTTAACTACAGTATTAACTACAGTACCAGAGTAACTCTG
GTTTTTACCATTGCTTTCTCGGTGTTGCTTTCTCTATGTTTGGGGATGCT
ACACTCAGCGGCGACCAGCTAGTTTTGTTATCCTGCCGTCCCAGCACACC
CTCCAGTCGGTTATTTCCGCTCGCGGAAGAGTTCAAAATAAAGTAGCTTA
TTGACCTTCGAGATCCCCCGTAAGTATAGCTGAGAGGTTACCGAGGCCTC
ACGCTCTCTGACATGACCGTAGAGTTCCTGTGCGCTAAGTCAGAGACCGC
CCCCCTTCGTGAACCACCGACTGTCGCGATATCGAAGCTGTCATGTCGGA
CATCAACGAGCCTGTTTCCATTACTGACGAGGTTCTTGTCGAGGGCTCCG
GCGCCGTCAATAAGATGGTGAGACAATTTACCATCCACTATCCCACTGGC
TCTCTCTCTCTCTCTGCTCTCGTGGTGCGCTGTTGTCCTGTTGTCCTGAG
CCAGGATCTATACTCTTCTGTTGGACGTGCAATTGCTAAGACATTGCACC
CCGGAAATATGAACCCATGTCCCCCGTCCTCAGCTGAATAACAATACTAT
ATTCATGCTGTAGCTTATTTGCTTTTCCCGAGGTTTCGATGAGGTTTGGA
TGACAAAGTGTCTTCTTCGCTCGGGAGGCACTGGACAAAGCCCCCACGTG
TTTACGTTGACCCGGTGAAGACATGAAGTAAGTAATAAGTAAACAAGTGG
GCACACTTTACACCCATTATGTGTGTTCCGCTTCTTCCCAGACTGCTCTT
CGGTGGCTCCTGACGGGGACGGGACCTCTAACGTCCCCGGGCTGTGAGAA
CGGGGCCTTCTACAAGACCTCCGCTGCTAAGGCAGCGTCAGACCTCCAGG
TACTGTAATGCGAGTGGGCGATAGGGTCTTGTTGGACTAGGGGGACGACT
GATGTGACAAAGCGAGTAAACGATATGGGGATTTTCTGTCGGCTTGGTCT
CGTCGCTTGACTCGACTCGACTCCATACACTGGTACTGTAGTTCGAACGA
ATCGAATGGAAAGCCCTGCGAAACCTGCTGTACGTGTGATACATGTGACA
TCTGATCAAAGCTCGCCACGTAGTACGGAACCATTCGAAAATACAGGATC
ATGTTAATGTTAATATTAGTATTAATATTATTACCAGGTATGGTAGATTT
GAACAGGAAGGAGATACCAAGTTCTGCCTACAAAACCACTCTTGAACTGT
TCTCACTTCCTTTGGTTTGCAGCTCCGCTTTGTCCCCGGGCGCGGCACAA
GTCCCGATGGTGTTAAGTCTTACAATACAATCGGCACCCAGGGACGGCCA
CCTTCGGGGGTTACCTTACAGGTGAATAGCGCCGACAGAGCTCCAGGTGG
TGTACTGTACTGTACAGTATTAACAGCTTGTTGCGTTCATTTTCCGTAGT
TATCCCTTTGGTTTAGAAACTGTATTCATAACCTGATTTCCAATTTGCAT
AGACTCTTGCTTTATTTATTACCAAGTACTTGTGTACGTATAATCAATCC
GTGCTTCTGTATCCTTGGCGCCCTACTATACCCCAGCGTTCCCCCTAGAC
CCGCCTGTTTATTTCTAGGGACATACCTTGAAACTTGAAACGGTCGCGCC
TCGAGCATCGTGAATGGACGTCGGGTTGCCACCGTTACGCGACGTGATCT
GGTGCGGCGATGTCACACTCCCAGGTTGTGGCTATCCGCTCCAAGAGCGA
AGGCGTTGTACAGCTGCGGTCATCCGATCCCTTCGAAAACCCAAGGATAA
CCACAAACTACTTACAGAAGGGGTGCGAGTTTCGCTGAGTTGACATTTTA
GCTTCCGGAGCGTACAGTGACATGTTTGATTTTTGTATGCGTTTGGCGAT
GCGCAGGATGGGCCTAGCTTCCGTACTGTGGACGGTACAATAAGTCTTGC
CGCTTCTGCTATCAATATTGCCTTCGCCTTCACAGGTGATGTGTCTGAGG
TGACTTTGATGCGAGAGTCGGCTGAAAACAGTATACATCTACATGAACGT
CTACATGATTGAGTGCGGTAACATTTCTCTTTGCGCATCCTGCATTTCTC
CTCCCTCTTTGGGGACCACGAAGGGAGGACTTGGATAGCTTGACTCACGG
CATTAAAATCGCGCGAGAGCTATTCCACCAAGAAGCTTTCAAGGGCATGG
TTGGCAAGGAAGTTTTCCCTGGCAAGGACAATTTGCAGGTGGAGAACGCG
CAACTTTACCACCGCCTATTTTGACTATCCCGGCATCTAATGTATGTGCT
GCGGGTCCTGACAATGGTCTATACTGTGTTGCTATGCACAGCATATCTAT
ATTGTATCTGGCGATGGGGTATAGTAGCGGCTAAGACAGAACAGTCGCCC
CCGGCATCAAAGCTAAGCTGGACTCGTCCTTATCCTTGAGACGAAACAAG
GGTGTGACTACCGAGACACGGTCAGACCTCGATGGCGTTAACGAGATACG
TGGTTCGAGATGCGTGATGGTACCGTCGACGTTGACCAGTTTACCCGTCG
CTGTCCGCATTCTGGTAATGCTCTTGTTGAGCATGCTGTTCCGCCCCACG
ATTCCTTCCATTTCCTCGATTCCCTTCACAGCTTGACGAATACATCAAGT
CTACTGTTCACTCGGCCAACGCCTTGGTAGGCACCTGCAAGATGGGCGTC
GAATCTGACGAGATGGCTGTCGTGAACCCTGAGCTCAAGGTATTACTAAT
ACTTCAAACCTTTTGAAAACCAAATAGATGCGTGGGTGTGTAGAGTGTGG
GGATCGTCGATGGCTCTCTCCACAGGCATCCTTGTATGCGTTGTTTTTGT
GAGGTGTACTTCCAGCCTTATAACTCTCATTGAGCACCCCTTTGTTTTCC
ATCTGTAAAGTTGACTACCAATACTACCGTCCAGTACTGTAGTCTGGTTC
AGTCCAGTCCTATTGATACTACTAATACTATCAATACTATCAATATTATA
CTGTCGTATCGGCACTCGTGGTGAGTCGTTCCATACAGCAAAGGCGTTCC
CCAATTCTGTATTATAACATTAGAACTGGATACAAGTATGCTAATAATTT
GTCGAGAAACCAGAACTGTGAAGAACTCGAATAACCCCTCTTTCCAAGAA
AAAACAGTAGAATGGCACCCTCCATGTACCTCCCTCCCCGACTCTTGTCT
CTTCTCGACAAGGCGGCTGACGAGGAAATTGTGGCGAGGCGTTCAAGAGA
TGTACTCGGAGATAGTTTTCTGGCCGTGTTTTGTTCCGAGCCAACCCCCT
ACGATTTGTAGAATCTTTTGATGTCGCTACTTTAGTTCGAATATCTCATT
AGTAGGGAATATGGGCTTTTCTCGTTCTTAGACGTTGTCCGTAAACTCCT
CTGTTCCCCGTGCCTAATTCCGACGCGAAACAACAGGTACGAGGCGTGTC
TGGACTTCGAGTCGTTGATTCATCAGTTATGCCGTCCATTCCAGGCGGTC
AAACGGCGGCACCTACCATCATGATCGCGGAAAAGGCGGCGGATATGCTC
ATGCCTGCGTCGTCATAAAGCAGAGCTCCGTCCGTTTCAGGACCACGGAG
GCTCGTGTTAATCACGGTCATCCTGCTGTTGCGTATGATATAAAATAAGG
TTCCAGGATACGATGTTGTTCGTTATTGGTATACATTTTTTGGATCCTCG
AGGGTTCCTCTGATATGTCTGGCCGCGTGAACAAAGGCAAAATATGTAAT
AGACCTCCGCTCTTGTGCCTTGCTATCGCTGCGGTTGGATTTATGTACCC
CCAGACCACGACCGCCTTTCCTTTTTGAGCGATTTCTAAGGCTATGACTA
TCGTTTGACCATGACCATGACTACAGTAGACCTGTTCACTGCTGGACACT
TGGCGCATGGGGGAATTATACTCCGCACCTGAACGTGCACAAGTGGATTG
GTTTTCCACATGTGTCAGGGACGGATGTAATCGAAACGTACATTTGGCAT
TTAACTCCGGAACCTGGGGGGAAAATTATGGCATTTGTCGTTATTTATAA
TGCCCGTTTACAGTTGGTGCGTGTCGTCTGTTTAGGTAGCGATCGAAACG
CTGTGCAGGTACTTGCCTGCATGTTTCAAGTACTGTAGGCATAGTGAGTC
ACTCGCTGTCTGGGGAGTAGCCGGACTTAAGTGTTTTTTCGACCGTCGAG
TGTTCATGAAACCTAACTGGATGATATATTAATATTAATAGTGATGGTGA
TAGTTCTAGAAAGTTGTTGGGGGGGCGGGTTGGAACGCAACAACTCACTA
GTCTCTCGTTGAACGTTCCAGAGCATAACGGATAGGAATGAGGGACGTAG
AGGTAGCTATCGCTTGTTTTTCGTACATTACTGAGATAGAACTAGACTTC
AAGCTGTACAGTACGCCAAGAAGTTGAGAAGGCTTACGTTTGTTTGTTGT
TTTTCGTAGTTTACATTTTTAGAGCCAAGAGTGGCTGTGGTTTTAGACCA
CAGGGGTGGCTTTCATGAATGGCACGGTTCCCACGTGGATAACGTACAGT
ACTCTAGACTATGACTATGACTATGTAGAGAGCGTGAGAGAGC
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig823:110452..128944+

>mRNA_A-nodosum_M_contig823.14.2 ID=mRNA_A-nodosum_M_contig823.14.2|Name=mRNA_A-nodosum_M_contig823.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1914bp|location=Sequence derived from alignment at A-nodosum_M_contig823:110452..128944+ (Ascophyllum nodosum dioecious)
ATGAGCATAGTGAGCAGAAAAAACGTTCTGTTCATGTTACCCTCGCAATC
GCCTTTGAAATTGCTGTTGAGTTTGCAGTCCACTTTTTTTTCGGAAAGTT
CGAGTGCCCACCTTCCCAACAGTCAATACGTAGAACATGCTCAACTTCAA
GATTTCCTCAACCTGCAAAGATCATCTACTAATAGTATTAGGAATCGTGA
ACCCTTAAACTTTCCATCTCTGAGGAAAGCGGCGGTACCGAGCATGTCTG
CCGTAAAAGAGGGCCACCAGTACATCATCGTCGGTGGAGGAACGGCGGGA
TGTGTGCTGGCGAACCGTCTGACAGCCCATAAGGATAACTCGGTTTTGGT
GCTGGAGGCCGGCTCGCCCAAGTTCAACGCAAGGGACATCAAGATGCCAA
TTGGAATCCTCAGGCACGGCGTTCACGGTACTGTAGAGCTCTTCCGCTCG
GTGTTTGACTGGGGTTTCCAGTCGGATAAGGAGGAGTTCATAACCTCGGA
CAGCATCTACCTCTGCCGCGGGAAGGTTCTCGGGGGATCGAGCTGTACGA
ATGTTATGCTCTACCACCGAGGAGAGGAAGCAGACTATGACGCTTGGGGA
GTAGAGGGATGGACTGGCAAAGATGTTCTCCCGTACTTCAAGAAGGCCGA
GAACAACCGGTCCAAGAAGGAAGGGCGATTCCACAACAAGGGGGGCCTCA
TGCAGGTGGAAAACGCTAGGTACATGAATCCTCTCACAAAGAGATTCTTC
AAGGCTTGCGAGCAGGCGGGCATGCAAAAGAACGACGACTTCAACGACTG
GTCTCACTCACAGGAAGGCTTCGGACGTTTTCAGGTTGCGCAGAAGAATG
GAAGGCGATGCTCGGCAGCCTCGTCGTACCTGAAACAAGCTATGGGACGC
AAAAATCTTGACGTTCAAACCAGCGCGCAAACGACCAAGATCGTCATCAA
AGATGGCCGTGCGACAGGCGTGGAATACATTCAGGACGGGGAGAAGCGGA
TAGCCAACCTTGCTCCTGGTGGTGAGGTGCTATTGGCGGGCGGAGCCGTG
AGCTCTCCGCACGTTCTCCTTCTTAGCGGGGTGGGTCCGGCCGAGCATCT
CTTAGAGAAGAACATCGAGGTCAAGAGCGACTTGCCTGGCGTGGGCAAGA
ACCTCCGTGACCATCCAGCCGTCACTGTCATGTCGGACATCAACGAGCCT
GTTTCCATTACTGACGAGGTTCTTGTCGAGGGCTCCGGCGCCGTCAATAA
GATGACTGCTCTTCGGTGGCTCCTGACGGGGACGGGACCTCTAACGTCCC
CGGGCTGTGAGAACGGGGCCTTCTACAAGACCTCCGCTGCTAAGGCAGCG
TCAGACCTCCAGCTCCGCTTTGTCCCCGGGCGCGGCACAAGTCCCGATGG
TGTTAAGTCTTACAATACAATCGGCACCCAGGGACGGCCACCTTCGGGGG
TTACCTTACAGGTTGTGGCTATCCGCTCCAAGAGCGAAGGCGTTGTACAG
CTGCGGTCATCCGATCCCTTCGAAAACCCAAGGATAACCACAAACTACTT
ACAGAAGGGGGAGGACTTGGATAGCTTGACTCACGGCATTAAAATCGCGC
GAGAGCTATTCCACCAAGAAGCTTTCAAGGGCATGGTTGGCAAGGAAGTT
TTCCCTGGCAAGGACAATTTGCAGCTTGACGAATACATCAAGTCTACTGT
TCACTCGGCCAACGCCTTGGTAGGCACCTGCAAGATGGGCGTCGAATCTG
ACGAGATGGCTGTCGTGAACCCTGAGCTCAAGGTACGAGGCGTGTCTGGA
CTTCGAGTCGTTGATTCATCAGTTATGCCGTCCATTCCAGGCGGTCAAAC
GGCGGCACCTACCATCATGATCGCGGAAAAGGCGGCGGATATGCTCATGC
CTGCGTCGTCATAA
back to top