prot_A-nodosum_M_contig8223.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8223.1.1
Unique Nameprot_A-nodosum_M_contig8223.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length162
Homology
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A6H5JAY4_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAY4_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 5.420e-33
Identity = 65/131 (49.62%), Postives = 89/131 (67.94%), Query Frame = 0
Query:    1 PSSESHTEAICAKIVQDVVNGRAVAFKHSSVSDIHGLHVLPVGAVEGRKLRIIHDLTFAAHA-YRSSVNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHGVVAHVMLCRIDVKDAFRQIPVDPLHAAKLG 130
            PS+  H + I  K+V DV+ GRA+ F    + +I G+ V P+G ++  K RIIHDLTF +    R+SVN  TDF  AP C LGHV +D+ ++++YLRQ HGV   +++CRIDVK+AFRQIPVDP  A+  G
Sbjct:  681 PSALLHRDRITDKVVSDVILGRALVFDVRFIREILGVRVSPLGVIDKPKFRIIHDLTFTSGVPIRTSVNHDTDFDQAPECLLGHVLSDILKRVLYLRQVHGVSLEILICRIDVKEAFRQIPVDPSRASVFG 811          
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A835YZC0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZC0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.760e-21
Identity = 56/157 (35.67%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    1 PSSESHTEAICAKIVQDVVNGRAVAFKHSSVSDIH---GLHVLPVGAVE--GRKLRIIHDLTFAAHAYRSSVNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHGVVAHVMLCRIDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSSPG 152
            P    H      K+++D+  GR +   H++++ ++    LH+ PV  V+    K R++HDL+   H    SVN+ T F  AP    GH+F  +  +I  LRQ       +++ ++DVK AFRQ+ +D +    LGY +++  V+DL LQFGWRSSPG
Sbjct:   52 PLEPRHVPVFDCKVLEDIALGRCIVM-HAAIARMYFSTRLHINPVFVVDEGAAKFRVVHDLSALLHG--ESVNNTTVFEEAPVVGCGHIFEAMLYRIWSLRQAWPR-KRILISKMDVKSAFRQLALD-VRGPLLGYRYNDLVVVDLRLQFGWRSSPG 203          
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A836CKZ7_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKZ7_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.640e-18
Identity = 49/118 (41.53%), Postives = 70/118 (59.32%), Query Frame = 0
Query:   37 LHVLPVGAVE--GRKLRIIHDLTFAAHAYRSSVNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHGVVAHVMLCRIDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSSPG 152
            LH+ PV  V+      R++HDL+   H    SVN+ T F  AP  E GH+F  +  +I  LRQ       +++ ++DVK AFRQ+ +D +    LGY +++  V+DL LQFGWRSSPG
Sbjct:    7 LHINPVFVVDEGAANFRVVHDLSALLHG--ESVNNTTVFEEAPVVECGHIFEAMLYRIWSLRQAWPR-KRILISKMDVKSAFRQLALD-VRGPLLGYRYNDLVVVDLRLQFGWRSSPG 120          
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A6H5K0Y6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 5.810e-18
Identity = 51/162 (31.48%), Postives = 78/162 (48.15%), Query Frame = 0
Query:    4 ESHTEAICAKIVQDVVNGRAVAFKHSSVSDIHGLHVLPVGAVEGRKLRIIHDLTFAAHAYRSS---VNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHGVVAHVMLCRIDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSSPGFLDVVVSSLE 162
            + H   +  K+  DV   R +  + ++ SD+ G+ V P+GAV G+K+RII+D +F     + S   +N  T  S  P C  G        ++  LR R      ++  + DV  AFR + + P HA    Y   +  V DL L FGW +SPG    + S+ E
Sbjct:   85 DEHQTQVWEKLCDDVKRYRCIVLRKANASDVRGIRVAPLGAVPGKKVRIINDFSFDPSTSKGSKGGLNKDTIMSGVPRCLCGEALPAFLEELTSLRVRWPD-KRILAAKADVTSAFRNVRISPDHAHYFCYVIGDVLVADLRLTFGWAASPGLWGELASAAE 245          
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.860e-5
Identity = 25/53 (47.17%), Postives = 37/53 (69.81%), Query Frame = 0
Query:  110 IDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSSPGFLDVVVSSLE 162
            +DVK AFRQ+ +D +    LGY +++  V+DL LQFGWRSSPG+  +   ++E
Sbjct:  110 MDVKSAFRQLALD-VRGPLLGYRYNDLVVVDLRLQFGWRSSPGWWSLAGGAIE 161          
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Match: A0A1X7ST08_AMPQE (Uncharacterized protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7ST08_AMPQE)

HSP 1 Score: 52.8 bits (125), Expect = 3.510e-5
Identity = 41/166 (24.70%), Postives = 77/166 (46.39%), Query Frame = 0
Query:    1 PSSESHTEAICAKIVQDVVNGRAVAFKHSSVSDIHGLHVLPVGAVEGRKL----RIIHDLTFAAHAYRSSVNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHGVVAHVMLCRIDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSSPGFLDVVVSSLE 162
            P +   ++ +   + +++  GR +    +S+ D H +HV  VG V    +    R+I DL+F       SVND  D ++   C L +   +   +++       +   +++ +ID+K A+R IPV P     LG+ ++    +D  L F   S+P     V + +E
Sbjct:   76 PLAYQQSQVVGEYLQRELAAGRMLGSLPASILDCHPVHVNRVGVVPKGHIPGQWRMITDLSFPEGP---SVNDGVDSTL---CSLEYTSVNRVAEVIA-----DLGVGMLMAKIDIKSAYRMIPVHPADRPLLGWKWEGQVFVDSALPFCLCSAPKIFTAVANVIE 230          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8223.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JAY4_9PHAE5.420e-3349.62C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835YZC0_9STRA5.760e-2135.67Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CKZ7_9STRA1.640e-1841.53Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A6H5K0Y6_9PHAE5.810e-1831.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMP6_9STRA1.860e-547.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1X7ST08_AMPQE3.510e-524.70Uncharacterized protein n=1 Tax=Amphimedon queensl... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8223contigA-nodosum_M_contig8223:17416..17901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8223.1.1mRNA_A-nodosum_M_contig8223.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8223 17416..17901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8223.1.1 ID=prot_A-nodosum_M_contig8223.1.1|Name=mRNA_A-nodosum_M_contig8223.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp
PSSESHTEAICAKIVQDVVNGRAVAFKHSSVSDIHGLHVLPVGAVEGRKL
RIIHDLTFAAHAYRSSVNDKTDFSVAPPCELGHVFADVCRQIMYLRQRHG
VVAHVMLCRIDVKDAFRQIPVDPLHAAKLGYAFDEYAVMDLFLQFGWRSS
PGFLDVVVSSLE
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