prot_A-nodosum_M_contig821.22.7 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig821.22.7
Unique Nameprot_A-nodosum_M_contig821.22.7
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length271
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig821.22.7 vs. uniprot
Match: D7FUD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD9_ECTSI)

HSP 1 Score: 158 bits (399), Expect = 4.770e-40
Identity = 82/152 (53.95%), Postives = 108/152 (71.05%), Query Frame = 0 
Query:    5 IKKKINWPEYRWWPLVADTIKTALSSLTLEELNDRMESLNYPVEPFLEELEGEDTMEFSPPPEAPVEEDAVIPPHVLDALLEAPEEEARASLEEALQNEGRPTPDREAIAAARWMAVEVANEYLAKRREARDPRRPCAPPPQTEKSYNTLKG 156
            +++++ WPEY WWP++AD I+TAL S+TLEELN RM     P EPF+EELEG+D MEF PP E P+E++AVIP  V+D L++A +E   ASL E    EG P PDR+A+ +ARWMA + ANEYLA+RR  R PRRP  PP  + K  +  +G
Sbjct: 4033 MEQELGWPEYPWWPVLADAIETALRSMTLEELNSRMSMHYLPDEPFIEELEGKDGMEFPPPAEPPLEDEAVIPARVIDELIDASDEAVLASLNEM---EGIPKPDRDALDSARWMAYDAANEYLAERRSKRAPRRPQDPPAPSGKLLHLFEG 4181
[Close]
BLAST of mRNA_A-nodosum_M_contig821.22.7 vs. uniprot
Match: A0A6H5KKL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 8.420e-40
Identity = 82/152 (53.95%), Postives = 107/152 (70.39%), Query Frame = 0 
Query:    5 IKKKINWPEYRWWPLVADTIKTALSSLTLEELNDRMESLNYPVEPFLEELEGEDTMEFSPPPEAPVEEDAVIPPHVLDALLEAPEEEARASLEEALQNEGRPTPDREAIAAARWMAVEVANEYLAKRREARDPRRPCAPPPQTEKSYNTLKG 156
            ++ ++ WPEY WWP++AD I+TAL S+TLEELN RM     P EPF+EELEG+D MEF PP E P+E++AVIP  V+D L++A +E   ASL E    EG P PDR+A+ +ARWMA + ANEYLA+RR  R PRRP  PP  + K  +  +G
Sbjct: 1983 MEHELGWPEYPWWPVLADAIETALRSMTLEELNSRMSMHYLPDEPFIEELEGKDGMEFPPPAEPPLEDEAVIPARVIDELIDASDEAVLASLNEM---EGIPKPDRDALDSARWMAYDAANEYLAERRSKRAPRRPQDPPAPSGKLLHLFEG 2131
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig821.22.7 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUD9_ECTSI4.770e-4053.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKL5_9PHAE8.420e-4053.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig821contigA-nodosum_M_contig821:225977..239761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig821.22.7mRNA_A-nodosum_M_contig821.22.7Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig821 223468..239814 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig821.22.7 ID=prot_A-nodosum_M_contig821.22.7|Name=mRNA_A-nodosum_M_contig821.22.7|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=271bp
MIRTIKKKINWPEYRWWPLVADTIKTALSSLTLEELNDRMESLNYPVEPF
LEELEGEDTMEFSPPPEAPVEEDAVIPPHVLDALLEAPEEEARASLEEAL
QNEGRPTPDREAIAAARWMAVEVANEYLAKRREARDPRRPCAPPPQTEKS
YNTLKGSGSSGLWRRRSWRSWKWCWGRTVRTNQAEGGAQNGCRQRCDDRF
VRGRGRQPSKSQSAQKEAIGDALAFASTRSTKRPSQTTEGTTAVAAVAVP
VASAYCGARVFNWWHRDQRG*
back to top