prot_A-nodosum_M_contig820.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig820.8.1
Unique Nameprot_A-nodosum_M_contig820.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1820
Homology
BLAST of mRNA_A-nodosum_M_contig820.8.1 vs. uniprot
Match: A0A6H5KWL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL3_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 7.950e-44
Identity = 491/1529 (32.11%), Postives = 634/1529 (41.47%), Query Frame = 0
Query:  336 EPEKSLLGSLTITSDEPPACAATNTCEDVAQDALEGSLGRNGTLNVTAVTVT-TSPANDSRR--LLLVTGLSSPPRSSVVRTGSFLRASTTRRLQSNGASETETDIEFISGPVDSSDLTEAQQAAEQINALADGGIADLLEMLELPQDSEVGAGGMKYVEFGMVSDVSDDWGEALAMAASSDRGISDIAYGGLFVGLVVLAVLSALCLCPCCWLFFARNKSSADPAATTTKKRERVKTSSGVTAFPDDKEDEETCIDEAQSARSQPQPQRSPQAYPQPPSFGDDTPRGETASSEPPKKETFLSRLLGSGSSESKQDRKATATDGNQKEXXXD-VFSYSFSAMRGGAFPDKAEEEDVEKIQEPGDL-AESGGD--------------ADGPDSIVGGKAASGVSCLSMEATHGAGSEERRAATLSPAGAAAAARRGEAA-----------TGDG-------------------------DLEKXXXXXXXXXXXXXSSTIGSAAMAEVATASXXXXXXXXXXXXXXXXXXXXXXXXXXDEENKQEVAALS---DXXXXXXXXQKCAAGAAEVASGRRVSLGEFLTGTVDSYHGMHTMH----TLFSVPEESSSPSGS----STSGFNMDSA--GSVRARVAAAEEQTGHRTPAAPVGRAGALDTAGSARQGQLRRS----------AAAATA-------------------------SSPVEVR-NRPILAADRSESSGSESAPSPQDAKKLPPQVPHVSVPA----VGSGNGSSGGGQVSNSGSGHGPERESMRSTKSTSSAGSHLAGIAFVPSVASTDSFAL-SPESSPRRPKPSPLMPPLKETSSVKDEERTPXXXXXXXXXXXXXXX------------------------TNVAVAPAKETIAPTATS----VATVDVPPPVEISDTQSIAAPLTYSPVHGPSDSPLKVFSPFTRVAPGTPGD-FTSEKLSEAVVMVKQLRETAPTPRGGRDGDXXXXXXXRHRTIESSSEAGSVPLSSSSPPPAGLRPSRHLDGGVSGRGGSDDGSDSSPDRRLSSFEVHGPAAREEDESSSSPVSSRVSRPTFL------------PPYRSESAEGSISSLTRQDPPVWEA-------------------EAPISPTALSAHTESTLGGYSSSSSASVSAXXXXXXXXXXXXXXXXXXXXXXXXX-------DQVRGGIWNQSQEQLQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVERHHAQQPQTPSRAESKGALRVRDPGIFRIPSSQSTEAPTSKSISYVAPSPDGGAAYMFSGLDSRAFGSRRQ--SSLSSYPSFGLSSSGVESS------------------------GNFSDNESSGGLSTPSPPENKSSQPP--------------------PRTPLPVPLMTG--------TDT------IVAVDXXXXXXXXXSSARRRQPEAVASI--ADQPFIDQAPSAVRALVAPS---HAAGGGDLFALGPSQVEHQRRAR 1623
            EP+ SL+GS+TI SDE P CA    CE+V +D LE SLGRNGT+NVT VTVT T+ A D+ R  LL V        SS  R    LR S   + +    ++TET+IE+ S P  SS+LTEAQQAAEQINALA+ GIADLL+ + LP D+EV  G  K+V+ G ++D ++DW    + A + DR IS  AY G    L                +     K S    A   +  E+++ S   TA  DD +DE    +      S+ + QR                RG +          F++R+   GSS   +  +     G  +    D +F+Y   +  G    D  + +D      P  L A SG D              +  P +  G  A    +         A  + RR AT     AAA A  GE +            G G                         D+E               S+ G+    + A A+ XXXXXX   XXXXXXXXXXXXXXXX E+ + +V+      +        ++  A   E+++  R++L +FL GT D              L +V EE S P G+    S +G +   A    V          +   T    V  A ++D+A S+  G               A   T                          SS    R NRP+LA DRSESSGSE +                ++P     + SG+GS      S   SGH     S RS+ +TSS GS+L G++ + +  S DS    SPESSPRR                       XXXXXXXXXXXXXXX                        +++ +A +K++ + +A S    VA     PPV ++   + A    YSPV  PSDSP   +SP       +P D   ++               A  P   R               E+ SEAG     ++             DGG S    S D S S+P    +     G AA   D     P +S    P+ +              ++   +EGSI SL  Q P VW+                      P SP A+S  T ST+    S        XXXXXXXXXXXXXXXXXX XXXXXX       DQ R GIW + +++                                       E    +QP    RAE+K +LRVRDPG+ R+ SS STEAP+SKSIS VAPSPDG  AY+FS  +SRAFGSRRQ  SSLSSYPSFGLSSSGVESS                          FSDN SSG +S+ SPPE+   +                         P  VP   G        TDT           XXXXXXXXX  A+   P A  S   A+QPF  QAPS      APS    A GGG+LFAL P+ VEHQRRAR
Sbjct:  582 EPDGSLIGSITIISDEAPECAGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADDSSRNR---LLRGSRQLQEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVEIGVTKFVQLGTITDDAEDWDSIFSAALADDRSISTAAYLGF--ALXXXXXXXXXXXXXXXXMLCLSKKDSRRRNAGVVR-LEKIEES---TAINDDGDDE---FELPTKRMSEIKEQR----------------RGSS----------FMNRIPFFGSSAKMKAGETDIEAGTTRRVAEDHIFAYPPHSSGG----DSGKTQDAADASFPAPLGAPSGNDFFYATQRFADPQVNSPSPRTSTGALATGAAAXXXXXXXXVA--DRRRPATA----AAAPAHAGEVSEQWPLPISTTTVGAGGXXXXXXXXXXXXXXXXXGSMETKHDVESDARASSLSPAGRAGSS-GAINSGDAAGATTXXXXXXGVTXXXXXXXXXXXXXXXXTEQKRDDVSLEDIEQEHAEFGALQREHEAENKEISARGRMALADFLLGTSDMTSPTSASGRIGGALPTVMEEGS-PRGAQAAFSDAGTSSQVAEGSQVXXXXXXXXXSSAEGTVIVQVEPAASVDSAPSSVVGXXXXXXXXXXXXXXIAGLTTEARLGXXXXXXXXXXXXXXXXXXXXXSSNARARQNRPMLATDRSESSGSEQSAPSXXXXXXXXXXXXXTIPRPPALLASGSGSM---SYSMGSSGH---PTSTRSS-TTSSPGSNLIGVSLISNTPSADSILEPSPESSPRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGDSSDMDIAESKDSPSSSAVSSPASVAAATGLPPVVVAVVNAPA----YSPVREPSDSPPPAYSPLMGTLGSSPEDGAAADNTGXXXXXXXXXXXDASAPTARR----LVLGGGESMISEAMSEAGGASRHTAGAAAVXXXAGLGSDGGDS----SVDFSSSAPVELKTPSSATGYAAAAGDGDRPVPSASLAVTPSSVGLQRLQXXXXXXXXHKRTGSEGSIQSLILQGPSVWDLGGGGGGDADVEDVSMQDTYSPPSSPGAISTRTASTMASAVSXXXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXXRTAADQARTGIWGRREQE-------------------------------------DAELQRRRQP----RAEAKSSLRVRDPGMLRMASSVSTEAPSSKSISVVAPSPDGSGAYLFSRGESRAFGSRRQQSSSLSSYPSFGLSSSGVESSVEAGETGDGGGAGMFFGGQHSGRSSAFSDNASSGNVSSLSPPEDHLDEDSVDAATAXXXXXXXXXXXXXXXXXPSSVPSQVGSSGGHSVSTDTGXXXXXXXXXXXXXXXXXXXXRAQEVPPAAAISTIAAEQPFFHQAPSNTTGQAAPSVPSSAPGGGNLFALQPNVVEHQRRAR 2000          
BLAST of mRNA_A-nodosum_M_contig820.8.1 vs. uniprot
Match: D8LBV2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV2_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 2.450e-32
Identity = 99/195 (50.77%), Postives = 125/195 (64.10%), Query Frame = 0
Query:  336 EPEKSLLGSLTITSDEPPACAATNTCEDVAQDALEGSLGRNGTLNVTAVTVT-TSPANDSRR--LLLVTGLSSPPRSSVVRTGSFLRASTTRRLQSN---GASETETDIEFISGPVDSSDLTEAQQAAEQINALADGGIADLLEMLELPQDSEVGAGGMKYVEFGMVSDVSDDWGEALAMAASSDRGISDIAYGG 524
            EP+ SL+GS+TI SDE P C     CE+V +D LE SLGRNGT+NVT VTVT T+ A D+ R  LL V        SS  R    LR S  R+LQ       ++TET+IE+ S P  SS+LTEAQQAAEQINALA+ GIADLL+ + LP D+EV  G  K+V+ G ++D ++DW    + A + DR IS  AY G
Sbjct:  590 EPDGSLIGSITIISDEEPECEGAGNCEEVVEDGLESSLGRNGTVNVTDVTVTSTAAAADAGRRVLLFVADGDVADNSSRNR---LLRGS--RQLQEEEEAAGNQTETEIEYESSPDQSSNLTEAQQAAEQINALAETGIADLLDEMGLPPDTEVELGVTKFVQLGTITDDAEDWDGIFSAALADDRSISTAAYLG 779          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWL3_9PHAE7.950e-4432.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV2_ECTSI2.450e-3250.77Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 878..898
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1737..1754
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1320..1355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1247..1269
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1163..1819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1530..1544
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1631..1650
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1371..1397
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 878..1148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1801..1819
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1553..1572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 810..830
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..695
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 994..1032
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1071..1092
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 754..773
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 569..780
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1449..1467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1651..1671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1203..1226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1486..1529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig820contigA-nodosum_M_contig820:81947..89648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig820.8.1mRNA_A-nodosum_M_contig820.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig820 80213..89885 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig820.8.1 ID=prot_A-nodosum_M_contig820.8.1|Name=mRNA_A-nodosum_M_contig820.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1820bp
MTRDAVARVLTALAALLPRPAAVSLRGAAVQHVAEAEGSRIELLDRKDVA
IGFKGRLSDDIFRRLQGIDECTKDTSVGDAEAGIAIYEDEAACDREGPLV
GCNVLGKTNCRLCVTNGGSASEYLPSCPSYVEEYIKEIYPETTPSPAGTV
APVATAAPAATGAPAETMAPVTTAAPATTTAPATTSAPGATAAPGTTLSP
SLTSAPAVSLAPSATLAPGETKAPAISPAPASTLAPDATFAPAATLAPGA
TLAPGATLTPGATLTPTLPSIFPTIFTSTPSVMPSTAPTGAPTGTPTGMS
TGMPTATPTGIPSDPPTGAPTASPTAAPTGIFPVTEPEKSLLGSLTITSD
EPPACAATNTCEDVAQDALEGSLGRNGTLNVTAVTVTTSPANDSRRLLLV
TGLSSPPRSSVVRTGSFLRASTTRRLQSNGASETETDIEFISGPVDSSDL
TEAQQAAEQINALADGGIADLLEMLELPQDSEVGAGGMKYVEFGMVSDVS
DDWGEALAMAASSDRGISDIAYGGLFVGLVVLAVLSALCLCPCCWLFFAR
NKSSADPAATTTKKRERVKTSSGVTAFPDDKEDEETCIDEAQSARSQPQP
QRSPQAYPQPPSFGDDTPRGETASSEPPKKETFLSRLLGSGSSESKQDRK
ATATDGNQKEEDEDVFSYSFSAMRGGAFPDKAEEEDVEKIQEPGDLAESG
GDADGPDSIVGGKAASGVSCLSMEATHGAGSEERRAATLSPAGAAAAARR
GEAATGDGDLEKGEGKTGDYDDEEGSSTIGSAAMAEVATASAAAAAGAAA
TAAVAAAAAAATATAKADEENKQEVAALSDSSAAAAEEQKCAAGAAEVAS
GRRVSLGEFLTGTVDSYHGMHTMHTLFSVPEESSSPSGSSTSGFNMDSAG
SVRARVAAAEEQTGHRTPAAPVGRAGALDTAGSARQGQLRRSAAAATASS
PVEVRNRPILAADRSESSGSESAPSPQDAKKLPPQVPHVSVPAVGSGNGS
SGGGQVSNSGSGHGPERESMRSTKSTSSAGSHLAGIAFVPSVASTDSFAL
SPESSPRRPKPSPLMPPLKETSSVKDEERTPESSKESSKDEPPAPETNVA
VAPAKETIAPTATSVATVDVPPPVEISDTQSIAAPLTYSPVHGPSDSPLK
VFSPFTRVAPGTPGDFTSEKLSEAVVMVKQLRETAPTPRGGRDGDGGGSG
SGRHRTIESSSEAGSVPLSSSSPPPAGLRPSRHLDGGVSGRGGSDDGSDS
SPDRRLSSFEVHGPAAREEDESSSSPVSSRVSRPTFLPPYRSESAEGSIS
SLTRQDPPVWEAEAPISPTALSAHTESTLGGYSSSSSASVSAESAAASAS
MAAASASLAATAARTAADQVRGGIWNQSQEQLQQERQQRQWQLRRQPRSA
MARSAAAAGAKAAAAKAAAVERHHAQQPQTPSRAESKGALRVRDPGIFRI
PSSQSTEAPTSKSISYVAPSPDGGAAYMFSGLDSRAFGSRRQSSLSSYPS
FGLSSSGVESSGNFSDNESSGGLSTPSPPENKSSQPPPRTPLPVPLMTGT
DTIVAVDTGSSSDSNASSARRRQPEAVASIADQPFIDQAPSAVRALVAPS
HAAGGGDLFALGPSQVEHQRRARDSRREMARLGSSSSGESSSGQIQLPSL
ESDRQEERVGARDDDSNSSEAPREKSSTSQAGSDGRSGLRGGGGSILSSA
AAAIVSVFTGDAKASTGEEEAASSKDVGGSSSGKRRLSGEVETDEPEAKK
MMAKAAEGGEATTSTAPPPDGGAKSVEAEHVATYASGAKASEREFEEPGV
SSYSTIDSTGTAIRNPPNV*
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