mRNA_A-nodosum_M_contig820.4.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A6H5KQ50_9PHAE (Methyltransf_25 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ50_9PHAE) HSP 1 Score: 338 bits (866), Expect = 2.380e-113 Identity = 163/225 (72.44%), Postives = 190/225 (84.44%), Query Frame = 3
Query: 3 VDTSRAMLEQFERKAEGQGVSTVAVELTGPGQLGQGADASFALIYTCLALHHIRDCERTVSALAHYLRPG-GRLVVFDMEATDDAPRFHPSHFELGKELEHHGIREADLRAWCEGTGILKDLSVERLPFRKEDGENGAFGTGTEFTMLAFSCVREASNGASAAV---SVGASWDEACLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRLR 665
VDTSRAMLEQF+RKAEG+GV+TVAVELTGPGQLG+GAD SFAL Y+ L LHHIRDCERTVSALA YLRPG GRLV+FD+EAT+DA +FHP+ FELG +LEHHGIRE+DLRAWCE +G+L+DLSV+R+ F K +GE+GAFGTG EFT+LA +CVR+A S+ + CLAC+RRE EYECVPCGCHAFC+ CAMKVATGGRCK+CKNMF DLKRLR
Sbjct: 81 VDTSRAMLEQFDRKAEGRGVTTVAVELTGPGQLGEGADDSFALAYSSLTLHHIRDCERTVSALAGYLRPGSGRLVLFDLEATEDAHKFHPADFELGNQLEHHGIRESDLRAWCESSGMLEDLSVDRIGFSKGEGEDGAFGTGREFTLLAATCVRKAEGAEQREARRSSIAGDLSDGCLACNRREAEYECVPCGCHAFCRGCAMKVATGGRCKRCKNMFVDLKRLR 305
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A7S2B7F5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7F5_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 8.860e-14 Identity = 29/51 (56.86%), Postives = 40/51 (78.43%), Query Frame = 3
Query: 513 EACLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRLR 665
E CLAC ++EYECVPCGC +FC+ CAMKVA+GG+CK C+ +T +++ R
Sbjct: 10 EKCLACKVADIEYECVPCGCKSFCRRCAMKVASGGKCKNCREFYTSVRKRR 60
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A448YVJ3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YVJ3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.590e-11 Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 3
Query: 519 CLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRLR 665
CL C ++++ YEC PCGC +FC +CAMK+A+GGRCK C + L+RLR
Sbjct: 43 CLKCHKKQIVYECDPCGCPSFCTSCAMKLASGGRCKTCHQAYGGLRRLR 91
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A1Y2ILV0_PYCCO (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Trametes coccinea BRFM310 TaxID=1353009 RepID=A0A1Y2ILV0_PYCCO) HSP 1 Score: 71.6 bits (174), Expect = 4.930e-11 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 3
Query: 3 VDTSRAMLEQFERKAEGQGVS-----TVAVELTGPGQLGQGADASFALIYTCLALHHIRDCERTVSALAHYLRPGGRLVVFDMEATDDAP-RFHPSHFELGKELEH-HGIREADLRAWCEGTGIL----KDLSVERLPFRKED 398
VD S+A ++Q+ A QG++ V EL G+ G+ DA F ++ C + HH E+T LAH+L+PGG L+V D+ A D F +H + + H HG E +R +GTG++ KD ++ ED
Sbjct: 92 VDISQASVDQYNANASNQGLTPDEMKAVCTELR--GEAGELDDAKFDVVVCCASYHHFPSIEQTTRVLAHFLKPGGSLLVTDIRAAPDGRVLFKETHHHI---VPHKHGFTEDMIRTAFDGTGLINFEMKDAFKAKMTATGED 229
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A061QSP6_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061QSP6_9CHLO) HSP 1 Score: 67.0 bits (162), Expect = 9.640e-11 Identity = 26/50 (52.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 513 EACLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRL 662
E C+ C + ++ VPCGC AFCK CAMK+ATGG+C+ CK MF++L++
Sbjct: 37 EYCIICKSEKPLFQAVPCGCKAFCKKCAMKLATGGKCRVCKQMFSELRKF 86
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: UPI00044499E5 (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI00044499E5) HSP 1 Score: 67.4 bits (163), Expect = 4.650e-10 Identity = 49/149 (32.89%), Postives = 73/149 (48.99%), Query Frame = 3
Query: 3 VDTSRAMLEQFERKAEGQGVST-----VAVELTGPGQLGQGADASFALIYTCLALHHIRDCERTVSALAHYLRPGGRLVVFDMEATDDAPRFHPSHFELGKELEHH------GIREADLRAWCEGTGILKDLSVERLPFRKEDGENGAF 416
VD S+ M++++ + QG+ST V VEL G+ G+ A F +I LA HH + S LAH+L+PGG L+V D+ D+ P F HH G+ E+++R EG G L+ S ER + G++ F
Sbjct: 17 VDISQGMVDEYNHRVMNQGISTEEMRAVCVELK--GEDGELDGARFDVIVCALAYHHFSSILQVSSILAHFLKPGGCLLVADIMKGDEWQEVIPQEF-------HHVVAHTGGLSESEMREAFEGAG-LQSFSFERATTAMKHGKHVDF 155
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A060SBN7_PYCCI (Uncharacterized protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SBN7_PYCCI) HSP 1 Score: 68.6 bits (166), Expect = 6.020e-10 Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 3
Query: 3 VDTSRAMLEQFERKAEGQGVS-----TVAVELTG-PGQLGQGADASFALIYTCLALHHIRDCERTVSALAHYLRPGGRLVVFDMEATDDAP-RFHPSHFELGKELEH-HGIREADLRAWCEGTGI----LKDLSVERLPFRKED 398
VD S+A ++Q+ A QG++ V EL G PG+L DA F ++ C + HH +T LAH+L+PGG L+V D+ A D F +H + + H HG+ E +R+ E G+ +KD ++ ED
Sbjct: 91 VDISQASVDQYNINASNQGLTPDGMKAVCAELRGEPGELD---DAKFDVVVCCASYHHFPSIAQTTRVLAHFLKPGGSLIVTDVRAAPDGRVLFKETHHHI---VPHKHGLSEESVRSAFEDAGLVDFEMKDAFKAKMTATGED 228
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A482S400_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S400_9ARCH) HSP 1 Score: 65.5 bits (158), Expect = 1.050e-9 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 3
Query: 519 CLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRL 662
C C++ E+EC PC C+ +CK CAMK+ATGG+CK CK MFT + +
Sbjct: 64 CSICAKPNPEFECWPCRCNVYCKKCAMKLATGGKCKTCKTMFTTMSHI 111
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: UPI0004621D94 (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Trametes versicolor (strain FP-101664) TaxID=717944 RepID=UPI0004621D94) HSP 1 Score: 66.2 bits (160), Expect = 3.630e-9 Identity = 44/127 (34.65%), Postives = 66/127 (51.97%), Query Frame = 3
Query: 3 VDTSRAMLEQFERKAEGQGVS-----TVAVELTG-PGQLGQGADASFALIYTCLALHHIRDCERTVSALAHYLRPGGRLVVFDMEATDDAPR-FHPSHFELGKELEH-HGIREADLRAWCEGTGILK 359
VD S+A ++ + +A QG+ V ELTG PG+L DA F ++ A HH T LAH+L+PGG L+V D++A D F +H + + H HG+ E +R EG G+++
Sbjct: 85 VDISQASVDAYNAQASNQGLEPTEMRAVCAELTGAPGELD---DAKFDVVVCSAAYHHFPSIADTTRVLAHFLKPGGSLLVADIKAAPDGHALFKETHHHI---VPHKHGLTEEAVRGAFEGAGLVE 205
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Match: A0A1Y1XWU2_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1XWU2_9FUNG) HSP 1 Score: 60.5 bits (145), Expect = 1.370e-8 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 3
Query: 510 DEACLACSRREVEYECVPCGCHAFCKTCAMKVATGGRCKKCKNMFTDLKRLR 665
DE C C + + Y CGC CK CAM+ ATGG+C+KC F +LK++R
Sbjct: 12 DELCFVCKKSPISYAPRSCGCPTLCKKCAMRQATGGKCRKCGEFFAELKKVR 63 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig820.4.1 >prot_A-nodosum_M_contig820.4.1 ID=prot_A-nodosum_M_contig820.4.1|Name=mRNA_A-nodosum_M_contig820.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=216bp MLEQFERKAEGQGVSTVAVELTGPGQLGQGADASFALIYTCLALHHIRDCback to top mRNA from alignment at A-nodosum_M_contig820:72499..77696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig820.4.1 ID=mRNA_A-nodosum_M_contig820.4.1|Name=mRNA_A-nodosum_M_contig820.4.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5198bp|location=Sequence derived from alignment at A-nodosum_M_contig820:72499..77696+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig820:72499..77696+ >mRNA_A-nodosum_M_contig820.4.1 ID=mRNA_A-nodosum_M_contig820.4.1|Name=mRNA_A-nodosum_M_contig820.4.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=648bp|location=Sequence derived from alignment at A-nodosum_M_contig820:72499..77696+ (Ascophyllum nodosum dioecious)back to top |