prot_A-nodosum_M_contig8.56.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.56.1
Unique Nameprot_A-nodosum_M_contig8.56.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length566
Homology
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: D8LE09_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE09_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 4.100e-73
Identity = 139/290 (47.93%), Postives = 175/290 (60.34%), Query Frame = 0
Query:  278 AALDPSERLATDAKLRFERLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDGEEPPSLSREALDEAVLDG-GTGSGDVEGGE--------------------SASPLRKLARTLSG-CSDLRSAFLKCSWAKRFAQARSVPKKGMGGTG-----------GAPNWVPDNEAKGCMLCGSRFTVMLRRHHCRRCGRVVCASCAPTNNTRPIIE 534
            AA   +ER   DAKLR   LR   +N RCADCG PCADWAS+ HG+FVCL CA   R+LG+HV FTRSL MD+WT+ES+R ME GGN+RL EF +R G Y   P ++V EKYRHPCL LYR+ +AA+ DGE+PP +SREAL++AVL+  G G    +G                      +  PL+ L ++++G C  +  AF +      F Q     + G G  G           G P WV D E + CMLC   FTV+LRRHHCRRCGR+ C  CAPT N+RPI+E
Sbjct:  337 AAAAVAERRTEDAKLRLGELRLRPDNSRCADCGAPCADWASVAHGSFVCLKCAGQQRSLGMHVIFTRSLVMDKWTDESLRLMEAGGNKRLAEFSRRMGLY---PWSTVEEKYRHPCLPLYRKRLAALADGEKPPPISREALEQAVLEASGEGEASDDGXXXXXXXXXXXXXXXXXXXXXXAHDPLKLLFKSVTGGCDGVGQAFRR-----HFCQQALFRRTGAGAGGEAGXXXXXRGTGPPRWVADEEQEACMLCDRVFTVILRRHHCRRCGRLSCKFCAPTENSRPILE 618          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A7S0ISR1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ISR1_9EUKA)

HSP 1 Score: 123 bits (309), Expect = 1.660e-28
Identity = 74/267 (27.72%), Postives = 116/267 (43.45%), Query Frame = 0
Query:  286 LATDAKLRFERLRKISENRRCADCGGPCA--DWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHP---STSVGEKYRHPCLRLYREYIAAVGDGEEPPSLSREALDEAVLDGGTGSGDVEGGESASPLRKLARTLSGCSDLRSAFLKCSWAKRFAQARSVPKKGMGGTGGAPNWVPDNEAKGCMLCGSRFTVMLRRHHCRRCGRVVCASCAPTNNTRPIIEWSMPHAVRHCYLC 547
            ++  A +  + +  I  N  C DC  PC+   W SI HG  +CL CA  HRALG+H++F RSL +D+  E  ++ +  GGN+RL +F++ + + +        ++  +Y+ P   LYR  + A+  G+E P+                                    S  +++R          R                    W  D +A  C LC + F++ +RRHHCR+CGR VC  CAP    +P+ E  +    R C LC
Sbjct:    8 MSPPATIERDSVLSIPGNCHCFDCDTPCSADPWVSINHGTVICLQCAGCHRALGVHISFVRSLVLDQLKEREMQSLLRGGNQRLRKFLESSENAVPRHVWLELTIELRYQTPVADLYRRRLQALVAGDELPT------------------------------------SFAANIRPPXXXXXXXTRV-------------------WTSDADADACELCRTSFSLFVRRHHCRKCGRCVCGDCAPMERAKPLPELGIMQPCRQCRLC 219          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: F2UTG8_SALR5 (Uncharacterized protein (Fragment) n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UTG8_SALR5)

HSP 1 Score: 126 bits (316), Expect = 3.440e-27
Identity = 72/243 (29.63%), Postives = 118/243 (48.56%), Query Frame = 0
Query:  295 ERLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDGEEPPSLSREALDEAVLDGGTGSGDVEGGESASPLRKLARTLSGCSDLRSAFLKCSWAKRFAQARSVPKKGMGGTGGAPNWVPDNEAKGCMLCGSRFTVMLRRHHCRRCGRVVCASCAPTNNTRPIIEWSM 537
            + LR++  N  CA CG     WAS+  G  +CL C+  HR LG++++F RS+T+D+W+ + +  M+ GGN   LE      DY S  +             +YR  + A   GE+   L+                           ++LA+            +K +++K  +Q   +  +       AP+W+PD+ +  C  C  +FT++ RRHHCR CGR+VC++CAP NNT+PI ++ +
Sbjct:    5 DELRQLPGNDACAHCGDSDPTWASVSLGLLLCLKCSGVHRGLGVNISFVRSVTLDQWSSQQIAMMKAGGNASFLETCPDR-DYFSEEA------------EMYRRTLKASVSGEQAEELTERDK-----------------------KQLAQ------------MKQNYSK--SQQHFITHQD------APSWIPDSTSPACQQCHQKFTIVRRRHHCRHCGRLVCSTCAPQNNTKPIPKFGI 191          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A1X2H801_SYNRA (Arf-GAP domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H801_SYNRA)

HSP 1 Score: 118 bits (295), Expect = 6.640e-27
Identity = 56/159 (35.22%), Postives = 92/159 (57.86%), Query Frame = 0
Query:  286 LATDAKLRFERLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDGEE--PPSLSREALDEAVLDGGTGSGDVEGGESASPLR 442
            +A + K +   +++  +NR C DCG P   WAS+ +G F+CL C+  HR+ G+H++F RS++MD+W ++ V++ME+GGN++  +F +   DY   P+ S+ EKY   C  LYRE +AA  +G    P   +  ++      G T S +       SP+R
Sbjct:    1 MAAEYKKKLYEIQRRGDNRTCFDCGAPNPQWASVSYGIFMCLECSGVHRSFGVHISFVRSISMDKWFDDQVQKMEIGGNKKAKDFFESQPDYS--PNWSMQEKYNSQCATLYREKLAAEAEGRSWTPSPSAATSVKRTATPGSTRSLNSASARLNSPMR 157          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A1U7LLV3_NEOID (Arf-GAP domain-containing protein n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LLV3_NEOID)

HSP 1 Score: 121 bits (303), Expect = 8.410e-27
Identity = 53/125 (42.40%), Postives = 82/125 (65.60%), Query Frame = 0
Query:  291 KLRFERLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDGEEPPSLSR 415
            K   ++L+KI  N +CADCG P   WASI +G F+CL C+  HR+LG H++F RS+TMD W++  V++ME+GGN ++LEF +++ +Y+S  S S+ +KY       YRE + A  +G     ++R
Sbjct:    4 KETLQQLQKIPTNGKCADCGAPAPQWASISYGIFICLECSGQHRSLGTHISFVRSVTMDTWSDAQVKKMEIGGNAKVLEFFEQSPEYLS--SMSIKDKYSSDFAEDYREKLEAEAEGRSWTKIAR 126          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A4D9D8B9_9STRA (Arf-GAP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8B9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.620e-26
Identity = 55/117 (47.01%), Postives = 82/117 (70.09%), Query Frame = 0
Query:  296 RLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDGEEPPS 412
            RLR+++ N+ CADC  P   WAS+ +G+F+CL+C+  HRALG+H++F RS+TMD WT++ +R ME GGN++++ F Q+ G   S P   + +KY+     LYRE I AV +G EPP+
Sbjct:   12 RLRELAGNKVCADCPAPNPQWASVSYGSFICLDCSGQHRALGVHLSFVRSITMDSWTDKQIRLMEKGGNDQVISFFQQRGIAKSVP---IQQKYKTAEAELYRERIKAVVEGREPPT 125          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A482UR88_9ARCH (FYVE-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UR88_9ARCH)

HSP 1 Score: 113 bits (283), Expect = 2.100e-26
Identity = 43/85 (50.59%), Postives = 62/85 (72.94%), Query Frame = 0
Query:  473 VPKKGMGGTGGAPNWVPDNEAKGCMLCGSRFTVMLRRHHCRRCGRVVCASCAPTNNTRPIIEWSMPHAVRHCYLCYRSPILEWTN 557
            +P       GG  +W+ D++A  CM C  RF+ +LRRHHCRRCG+VVC +CAP+NN+RPI+EW +  AVRHC  C++SP+++W +
Sbjct:   26 IPSSSTKEAGGGASWILDSDAPQCMRCSRRFSFLLRRHHCRRCGQVVCEACAPSNNSRPILEWGLREAVRHCRGCFKSPLIDWND 110          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A4P9Z5F0_9FUNG (Arf-GAP domain-containing protein n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9Z5F0_9FUNG)

HSP 1 Score: 109 bits (272), Expect = 1.350e-24
Identity = 52/116 (44.83%), Postives = 71/116 (61.21%), Query Frame = 0
Query:  288 TDAKLRFERLRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAA 403
            +D KL  E L++   NR C DCG P   WAS+  G F C++C+  HRALG+HV+F RS+TMD+W  + + RM++GGN +LL F +   DY   P  S+ EKY       YRE + A
Sbjct:    5 SDKKLLLE-LQRREGNRTCIDCGAPSPQWASVTLGTFFCIDCSGQHRALGVHVSFVRSITMDKWAPDQLERMKLGGNAKLLAFFEAQPDY--RPDMSIREKYTSRFADNYREKVRA 117          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A1Y2BAD4_9FUNG (ArfGap-domain-containing protein (Fragment) n=2 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2BAD4_9FUNG)

HSP 1 Score: 112 bits (281), Expect = 2.340e-24
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  297 LRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYIAAVGDG 407
            L+K   N  C DCG P   WAS+ +G F CLNC+  HR+LG+H++F RS+TMD+W++E +++ME+GGN + L+F Q   DY      S+ EKY     +LYRE + A  +G
Sbjct:    3 LQKQEGNNICIDCGAPNPQWASVTYGIFFCLNCSGIHRSLGVHISFVRSITMDKWSDEQLKKMELGGNTKALQFFQSQPDYRE--GMSIKEKYNSNFAKLYREKLQAECEG 111          
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Match: A0A075B212_ROZAC (Arf GTPase activating protein domain-containing protein n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B212_ROZAC)

HSP 1 Score: 114 bits (284), Expect = 3.660e-24
Identity = 49/105 (46.67%), Postives = 71/105 (67.62%), Query Frame = 0
Query:  297 LRKISENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDRWTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREYI 401
            L+K   NR C DCG P   WAS+  G F CL C+  HR+LG+H++F RS+TMD+WTE+ +R+M++GGN++  EF++   DY  +PS  + E+Y     RLYRE +
Sbjct:   14 LQKQEGNRLCFDCGAPNPQWASVSLGTFFCLECSGIHRSLGVHLSFVRSITMDKWTEDQIRKMQLGGNKKAKEFLEAQPDY--NPSQGIRERYNTDAARLYREKV 116          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.56.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE09_ECTSI4.100e-7347.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0ISR1_9EUKA1.660e-2827.72Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
F2UTG8_SALR53.440e-2729.63Uncharacterized protein (Fragment) n=1 Tax=Salping... [more]
A0A1X2H801_SYNRA6.640e-2735.22Arf-GAP domain-containing protein n=1 Tax=Syncepha... [more]
A0A1U7LLV3_NEOID8.410e-2742.40Arf-GAP domain-containing protein n=1 Tax=Neolecta... [more]
A0A4D9D8B9_9STRA1.620e-2647.01Arf-GAP domain-containing protein n=2 Tax=Monodops... [more]
A0A482UR88_9ARCH2.100e-2650.59FYVE-type domain-containing protein n=1 Tax=archae... [more]
A0A4P9Z5F0_9FUNG1.350e-2444.83Arf-GAP domain-containing protein n=1 Tax=Syncepha... [more]
A0A1Y2BAD4_9FUNG2.340e-2445.05ArfGap-domain-containing protein (Fragment) n=2 Ta... [more]
A0A075B212_ROZAC3.660e-2446.67Arf GTPase activating protein domain-containing pr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001164Arf GTPase activating proteinPRINTSPR00405REVINTRACTNGcoord: 343..364
score: 37.77
coord: 303..322
score: 42.59
coord: 322..339
score: 46.93
IPR001164Arf GTPase activating proteinSMARTSM00105arf_gap_3coord: 291..408
e-value: 1.2E-24
score: 97.8
IPR001164Arf GTPase activating proteinPFAMPF01412ArfGapcoord: 294..395
e-value: 7.4E-26
score: 90.5
IPR001164Arf GTPase activating proteinPROSITEPS50115ARFGAPcoord: 291..372
score: 21.357756
IPR000306FYVE zinc fingerSMARTSM00064fyve_4coord: 482..553
e-value: 1.7E-11
score: 54.2
IPR000306FYVE zinc fingerPFAMPF01363FYVEcoord: 486..549
e-value: 2.7E-17
score: 62.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 479..552
e-value: 1.3E-18
score: 68.6
IPR038508ArfGAP domain superfamilyGENE3D1.10.220.150Arf GTPase activating proteincoord: 279..412
e-value: 4.3E-31
score: 109.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..268
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52
NoneNo IPR availablePANTHERPTHR45686ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATEDcoord: 289..408
NoneNo IPR availablePANTHERPTHR45686:SF16ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN GCS1coord: 289..408
IPR017455Zinc finger, FYVE-relatedPROSITEPS50178ZF_FYVEcoord: 490..552
score: 11.822254
IPR037278ARFGAP/RecO-like zinc fingerSUPERFAMILY57863ArfGap/RecO-like zinc fingercoord: 294..378
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 485..550

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:679229..713451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.56.1mRNA_A-nodosum_M_contig8.56.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 678994..715964 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.56.1 ID=prot_A-nodosum_M_contig8.56.1|Name=mRNA_A-nodosum_M_contig8.56.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=566bp
MHKRSSSSTPPRIPAAVRREAVAAAEAATAAAAARRRPRGDGHHRKTSPR
HSGRPVRPAWSRSASSYDGSSARNTTIPSSTLRRSHSSVEPRARCSLSSP
ERHAAAAPFLPHQAGASPPPALERLVMPVAGSRRSSCPPITRRVRPAHSS
EDTQLLSLVGKQRRTSTAVIRRTHSEGEPLRVAAASAAAQTRPHSCREPF
IPAPSPKANPGDRTLLKEPEATRSTTTVVETRGVGDRGEGGNVLVKVAGS
RKNMGEEIESHRKPEVSRSNGGQDQQPAALDPSERLATDAKLRFERLRKI
SENRRCADCGGPCADWASICHGAFVCLNCADHHRALGLHVAFTRSLTMDR
WTEESVRRMEMGGNERLLEFVQRAGDYMSHPSTSVGEKYRHPCLRLYREY
IAAVGDGEEPPSLSREALDEAVLDGGTGSGDVEGGESASPLRKLARTLSG
CSDLRSAFLKCSWAKRFAQARSVPKKGMGGTGGAPNWVPDNEAKGCMLCG
SRFTVMLRRHHCRRCGRVVCASCAPTNNTRPIIEWSMPHAVRHCYLCYRS
PILEWTNVRSIAGNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001164ArfGAP_dom
IPR000306Znf_FYVE
IPR013083Znf_RING/FYVE/PHD
IPR038508ArfGAP_dom_sf
IPR017455Znf_FYVE-rel
IPR037278ARFGAP/RecO
IPR011011Znf_FYVE_PHD