mRNA_A-nodosum_M_contig1222.12.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1222.12.1
Unique NamemRNA_A-nodosum_M_contig1222.12.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: D7G5J3_ECTSI (PPIase cyclophilin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5J3_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 3.690e-116
Identity = 191/259 (73.75%), Postives = 212/259 (81.85%), Query Frame = 2 
Query:  326 GAQLLKGGGSSKPEINDGRDLSPEDDEAEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA-KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDSAALETEGESQGN----DGFRAEAMRGVREDLRQEKLAVRRVVAAALASS 1087
            GAQLLKG GSSK         SP DD+ EEPA PQA VTDKVFFDVEI+G PAGRVIMGLYG +VP+TA NFV LCKGDP  +RQPFGYKGS FHR IPGFMVQGGDFTRG+GTGG SI+G KF DEDMS+LKHVGPGVLSMANSGP++NGSQFFITTAPCGWLDG+HVVFGQVLQGMDVV+R+E LGSRSG++SG A IAG G+VKR+SAA+ETEG   G     + FRA AMRGVR D+R+EK AV R V  A  SS
Sbjct:  151 GAQLLKGSGSSKGSTP----ASPTDDD-EEPAIPQAAVTDKVFFDVEIDGLPAGRVIMGLYGAVVPRTAKNFVGLCKGDPKQRRQPFGYKGSIFHRAIPGFMVQGGDFTRGNGTGGVSIFGAKFDDEDMSQLKHVGPGVLSMANSGPNSNGSQFFITTAPCGWLDGKHVVFGQVLQGMDVVFRIEDLGSRSGKLSGKAVIAGCGLVKRNSAAMETEGAGWGGADSGNSFRANAMRGVRADVREEKAAVSRAVGNAFKSS 404
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A2V0P3P9_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P3P9_9CHLO)

HSP 1 Score: 235 bits (600), Expect = 8.850e-72
Identity = 119/185 (64.32%), Postives = 141/185 (76.22%), Query Frame = 2 
Query:  407 AEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA---KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDS 952
            AE   + +A +T KVFFD+EI+G+P GR++MGLYGE+VPKT  NF ALC G+       +P  YKGS FHRVIP FM+QGGDFTR DGTGG SIYG KF DE+  +LKH GPG LSMAN+GPDTNGSQFFITT   GWLDGRHVVFG+VL+GMDVV ++E+LGS SG+ S    IA SG +K  S
Sbjct:   22 AEAKEKKKAQITHKVFFDIEIDGKPEGRILMGLYGEVVPKTVENFRALCTGEKGVGKSGKPLHYKGSIFHRVIPQFMLQGGDFTRSDGTGGESIYGEKFADENF-KLKHKGPGYLSMANAGPDTNGSQFFITTIKTGWLDGRHVVFGKVLEGMDVVMKVEALGSGSGKPSKKVVIADSGEIKETS 205
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A7R9VAD6_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VAD6_9CHLO)

HSP 1 Score: 233 bits (595), Expect = 3.550e-71
Identity = 112/172 (65.12%), Postives = 135/172 (78.49%), Query Frame = 2 
Query:  437 VTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA---KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVK 943
            +TDKV+FD+EI GEPAGR++MGL+G  VPKTA NF ALC G+       +P  YKGS FHRVIP FM+QGGDFTRGDGTGG SIYG +F DE+  +LKH  PG LSMAN+GPDTNGSQFFITT    WLDGRHVVFG+V++GMDVVY++E +GS SG+ +    IA SGV++
Sbjct:   25 ITDKVYFDIEIGGEPAGRIVMGLFGNTVPKTAGNFKALCTGERGTGTSGKPLHYKGSAFHRVIPQFMIQGGDFTRGDGTGGESIYGSRFPDENF-KLKHTAPGYLSMANAGPDTNGSQFFITTVVTSWLDGRHVVFGKVIEGMDVVYKVEGVGSGSGKPAKKVVIADSGVLE 195
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A087SNB6_AUXPR (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SNB6_AUXPR)

HSP 1 Score: 232 bits (591), Expect = 2.310e-70
Identity = 114/174 (65.52%), Postives = 138/174 (79.31%), Query Frame = 2 
Query:  437 VTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA---KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRD 949
            +T KVFFD+EI+G PAGR++MGLYG+ VPKTA NF AL  G+      ++P  ++GS FHR+IP FM+QGGDFTRGDGTGG SIYG KF DE+  +LKH GPGVLSMANSG D+NGSQFFITT    WLDGRHVVFG+V++GMDVVY++E+LGS+SG+ S   TIA SG V  D
Sbjct:   28 ITSKVFFDIEIDGAPAGRIVMGLYGKTVPKTAENFRALATGEKGIGQSKKPLTFQGSHFHRIIPQFMLQGGDFTRGDGTGGESIYGPKFADENF-KLKHTGPGVLSMANSGRDSNGSQFFITTVKTSWLDGRHVVFGRVIEGMDVVYKIEALGSQSGQPSKKVTIAKSGEVTGD 200
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A2S8GAG5_9BACT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8GAG5_9BACT)

HSP 1 Score: 230 bits (586), Expect = 8.960e-70
Identity = 115/174 (66.09%), Postives = 136/174 (78.16%), Query Frame = 2 
Query:  428 QAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPAKRQ---PFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 940
            Q  VTDKVFFD+ ING+PAGR+++GL+G+ VPKTAANF ALC G+  K +   P  YKGS FHRVIP FM+QGGDFT G+GTGG SIYG KF DE+  +  H G GVLSMANSGP+TNGSQFFITT    WLDGRHVVFG+VL+GMDVV ++ESLGS+SG+     TIA  GV+
Sbjct:   25 QGKVTDKVFFDIAINGQPAGRIVIGLFGDDVPKTAANFRALCTGEKGKGRAGVPLSYKGSSFHRVIPQFMLQGGDFTNGNGTGGESIYGAKFADENF-KYTHDGSGVLSMANSGPNTNGSQFFITTVKTDWLDGRHVVFGRVLEGMDVVKKVESLGSQSGKPRATVTIADCGVL 197
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A7J7C1K8_TRIWF (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C1K8_TRIWF)

HSP 1 Score: 230 bits (587), Expect = 1.440e-69
Identity = 118/199 (59.30%), Postives = 149/199 (74.87%), Query Frame = 2 
Query:  353 SSKPEINDGRDLSPEDDEAEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA---KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 940
            S++P++NDG+ L+ E+ ++EE  R    VT KV+FD+EI G+P GRVIMGL+G+ VP+T  NF ALC G+       +P  YKGS+FHR+IP FM+QGGDFTRGDG GG SIYGGKF DE+   LKH GPG+LSMAN GPDTNGSQFFITT    WLDG HVVFG+V+ GMDV+Y++E+ GS+SG      TI+ SG +
Sbjct:   31 SAEPKVNDGK-LN-EEKKSEEALRE---VTHKVYFDIEIGGKPMGRVIMGLFGKTVPRTVENFRALCTGEKGIGMNGKPLHYKGSKFHRIIPSFMIQGGDFTRGDGRGGESIYGGKFADENFI-LKHTGPGLLSMANGGPDTNGSQFFITTVITSWLDGHHVVFGKVISGMDVIYKIEAEGSKSGMPKSQVTISDSGEI 223
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A7S0VMG7_9CHLO (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Polytomella TaxID=3049 RepID=A0A7S0VMG7_9CHLO)

HSP 1 Score: 229 bits (585), Expect = 1.490e-69
Identity = 114/181 (62.98%), Postives = 136/181 (75.14%), Query Frame = 2 
Query:  407 AEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPA---KRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVV 940
            A +P +    +T+KVFFDVEI+G+ AGR++MGLYG +VPKT  NF ALC G+       +P  YKGS FHR+IP FM+QGGDFTRGDGTGG SIYG KF DE+  +LKH GPG LSMANSG DTNGSQFFITT    WL+GRHVVFG VL+GMDVVY++ES+G+ SGR      IA SG +
Sbjct:   23 AAKPKKVDDSITNKVFFDVEIDGKAAGRIVMGLYGNVVPKTVENFRALCTGEKGIGKSGKPLHYKGSIFHRIIPQFMLQGGDFTRGDGTGGESIYGNKFADENF-KLKHKGPGFLSMANSGADTNGSQFFITTVATSWLNGRHVVFGTVLEGMDVVYKVESMGTSSGRPKSKVVIADSGEI 202
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A0D2MNZ0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MNZ0_9CHLO)

HSP 1 Score: 229 bits (583), Expect = 2.960e-69
Identity = 114/178 (64.04%), Postives = 138/178 (77.53%), Query Frame = 2 
Query:  428 QAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALC---KGDPAKRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDS 952
            +A VT KVFFD+EI+G+PAGR++MGL+G+IVPKT  NF ALC   KG     +P  +KGS FHR+IP FM+QGGDFTRGDGTGG SIYG KF DE+  +LKH  PG LSMAN+GP+TNGSQFFITT    WLDGRHVVFG+V++GMDVV ++E++GS SG  S   TIA SG +K  S
Sbjct:   28 KAEVTHKVFFDIEIDGKPAGRIVMGLFGDIVPKTVENFRALCTGEKGTGKSGKPLHFKGSVFHRIIPQFMIQGGDFTRGDGTGGESIYGEKFADENF-KLKHKAPGYLSMANAGPNTNGSQFFITTVKTAWLDGRHVVFGKVIEGMDVVLKVEAIGSGSGTPSKKVTIADSGEIKEAS 204
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A5M6DP28_9BACT (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Roseiconus nitratireducens TaxID=2605748 RepID=A0A5M6DP28_9BACT)

HSP 1 Score: 228 bits (582), Expect = 4.040e-69
Identity = 116/186 (62.37%), Postives = 139/186 (74.73%), Query Frame = 2 
Query:  401 DEAEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALCKGDPAKRQ---PFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRD 949
            D+A   +   A VTDKV+FD+EINGEPAGR++MGL+G+ VPKT  NF AL  G+  K Q   P  YKGS FHRVIP FM+QGGDFTRGDGTGG SIYG KF DE  +  KH  PG+LSMAN+GP+TNGSQFFITT P  WLDG+HV+FG+V++GMDVV R+E LG+ SGR      IA SG +K +
Sbjct:   19 DDASAQSAENAPVTDKVYFDIEINGEPAGRIVMGLFGKDVPKTVENFRALATGEKGKGQSGKPLHYKGSAFHRVIPDFMLQGGDFTRGDGTGGESIYGAKFADEKFA-YKHDVPGLLSMANAGPNTNGSQFFITTVPTPWLDGKHVIFGRVIEGMDVVKRIEQLGTSSGRTRLPIVIADSGELKEE 203
[Close]
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Match: A0A7J7Q6Q0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q6Q0_9CHLO)

HSP 1 Score: 228 bits (580), Expect = 8.300e-69
Identity = 112/174 (64.37%), Postives = 136/174 (78.16%), Query Frame = 2 
Query:  431 AGVTDKVFFDVEINGEPAGRVIMGLYGEIVPKTAANFVALC---KGDPAKRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGGSSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDGRHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVK 943
            A VT+KVFFD+EI+G+PAGR++MGL+G++VPKT  NF ALC   KG     +P  +KGS FHRVIP FM+QGGDFTR DGTGG SIYG KF DE+  +LKH GPG LSMAN+GP+TNGSQFFITT    WLDGRHVVFG+V++GMDVVY++E++GS  G  S    IA SG +K
Sbjct:   29 AAVTNKVFFDIEIDGQPAGRIVMGLFGDVVPKTVENFRALCTGEKGTGKSGKPLHFKGSVFHRVIPQFMLQGGDFTRSDGTGGESIYGEKFADENF-KLKHKGPGYLSMANAGPNTNGSQFFITTVKTTWLDGRHVVFGKVIEGMDVVYKVEAVGSGGGATSKKVVIADSGELK 201
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1222.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5J3_ECTSI3.690e-11673.75PPIase cyclophilin-type domain-containing protein ... [more]
A0A2V0P3P9_9CHLO8.850e-7264.32Peptidyl-prolyl cis-trans isomerase n=1 Tax=Raphid... [more]
A0A7R9VAD6_9CHLO3.550e-7165.12Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamy... [more]
A0A087SNB6_AUXPR2.310e-7065.52Peptidyl-prolyl cis-trans isomerase n=2 Tax=Auxeno... [more]
A0A2S8GAG5_9BACT8.960e-7066.09Peptidyl-prolyl cis-trans isomerase n=1 Tax=Blasto... [more]
A0A7J7C1K8_TRIWF1.440e-6959.30Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tripte... [more]
A0A7S0VMG7_9CHLO1.490e-6962.98Peptidyl-prolyl cis-trans isomerase n=2 Tax=Polyto... [more]
A0A0D2MNZ0_9CHLO2.960e-6964.04Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monora... [more]
A0A5M6DP28_9BACT4.040e-6962.37Peptidyl-prolyl cis-trans isomerase n=2 Tax=Roseic... [more]
A0A7J7Q6Q0_9CHLO8.300e-6964.37Peptidyl-prolyl cis-trans isomerase n=1 Tax=Scened... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1222contigA-nodosum_M_contig1222:194261..202508 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G5J3
Model size1465
Max annot lvl2880.D7G5J3|-
Hectar predicted targeting categorymitochondrion
Exons8
Evalue3.42e-119
EggNOG OGsCOG0652@1|root,KOG0880@2759|Eukaryota
Ec32 ortholog descriptionCyclophilin-like domain
Ec32 orthologEc-22_000860.1
Descriptionpeptidyl-prolyl cis-trans isomerase activity
Cds size1047
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1222.12.1prot_A-nodosum_M_contig1222.12.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1222 194609..202438 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866653.4416754-UTR-A-nodosum_M_contig1222:194260..1946081680866653.4416754-UTR-A-nodosum_M_contig1222:194260..194608Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1222 194261..194608 -
1680866653.6434093-UTR-A-nodosum_M_contig1222:202438..2025081680866653.6434093-UTR-A-nodosum_M_contig1222:202438..202508Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1222 202439..202508 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866653.5082521-CDS-A-nodosum_M_contig1222:194608..1948121680866653.5082521-CDS-A-nodosum_M_contig1222:194608..194812Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 194609..194812 -
1680866653.516461-CDS-A-nodosum_M_contig1222:195867..1959101680866653.516461-CDS-A-nodosum_M_contig1222:195867..195910Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 195868..195910 -
1680866653.5271306-CDS-A-nodosum_M_contig1222:196626..1967601680866653.5271306-CDS-A-nodosum_M_contig1222:196626..196760Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 196627..196760 -
1680866653.5372984-CDS-A-nodosum_M_contig1222:198166..1982681680866653.5372984-CDS-A-nodosum_M_contig1222:198166..198268Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 198167..198268 -
1680866653.5482976-CDS-A-nodosum_M_contig1222:198701..1987701680866653.5482976-CDS-A-nodosum_M_contig1222:198701..198770Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 198702..198770 -
1680866653.5572045-CDS-A-nodosum_M_contig1222:199935..2000701680866653.5572045-CDS-A-nodosum_M_contig1222:199935..200070Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 199936..200070 -
1680866653.567418-CDS-A-nodosum_M_contig1222:200534..2005791680866653.567418-CDS-A-nodosum_M_contig1222:200534..200579Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 200535..200579 -
1680866653.6311352-CDS-A-nodosum_M_contig1222:202123..2024381680866653.6311352-CDS-A-nodosum_M_contig1222:202123..202438Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1222 202124..202438 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1222.12.1

>prot_A-nodosum_M_contig1222.12.1 ID=prot_A-nodosum_M_contig1222.12.1|Name=mRNA_A-nodosum_M_contig1222.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=349bp
MPMPRGSLWLASSPMHGRWATTSVTRAWFGSASGGGFDAANAARGGVASG
PGGGTPQPPPPPRPGRSSTALTLVGGILLFAGGYIGAQLLKGGGSSKPEI
NDGRDLSPEDDEAEEPARPQAGVTDKVFFDVEINGEPAGRVIMGLYGEIV
PKTAANFVALCKGDPAKRQPFGYKGSRFHRVIPGFMVQGGDFTRGDGTGG
SSIYGGKFKDEDMSRLKHVGPGVLSMANSGPDTNGSQFFITTAPCGWLDG
RHVVFGQVLQGMDVVYRMESLGSRSGRVSGNATIAGSGVVKRDSAALETE
GESQGNDGFRAEAMRGVREDLRQEKLAVRRVVAAALASSGTKKKRDEE*
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mRNA from alignment at A-nodosum_M_contig1222:194261..202508-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1222.12.1 ID=mRNA_A-nodosum_M_contig1222.12.1|Name=mRNA_A-nodosum_M_contig1222.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=8248bp|location=Sequence derived from alignment at A-nodosum_M_contig1222:194261..202508- (Ascophyllum nodosum dioecious)
TGCAACGATCGTTCGAGCAGCAAATAGAACCATCACCGTCAGCGCCGTCT
GCCATACCCACGCCCTGCCCATGCCCATGCCACGGGGTTCGCTGTGGCTC
GCTTCGTCGCCAATGCATGGGCGTTGGGCAACAACTTCGGTGACCCGTGC
TTGGTTTGGGAGCGCTTCGGGCGGTGGCTTCGACGCTGCTAACGCGGCTC
GGGGTGGTGTAGCAAGTGGGCCGGGCGGCGGGACACCACAGCCGCCCCCT
CCACCTCGACCTGGACGAAGCAGCACGGCGCTGACCTTGGTGGGGGGGAT
CCTCCTGTTTGCCGGAGGATACATCGGAGCGCAGCTGCTAAAAGGGGGAG
GGTCTTCGAAGCCGGAGATAAATGATGGGCGCGATGTGAGTAGGTAGGTT
AGGACTGGTTGTGCGAATGCGTCATGTGGCATGTGAAGGGACATACTGTA
TGTCTGTATGGTCATCACATATACCTGTACAAGAAAGGGTAAGGATCAAC
CGGGTAAGGTTGCCAATCCTGCTCATGGTCAGCTGAACAAGGAAAATGAA
CATTTCCCCGTCCCCATTCGTGACTGAGACTTTGGTCTCGCGAGACGGAT
TTGGCAGTCCCGTCCCGCGTCAGCCTACTCATCTCCATACTCAGGCTGAA
TATGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCAGCGGCGTCCATT
TATTCATTTAAACCGCCATACTCCATAGGGTCAGTCCCGAGTTCATCGGG
TCACGCAATTGCGTACCGATGGCGTTCACTGCCGAAAGTCCGCCTGCACA
GGGCCAGTAGACCTCATGGTAGTTCCAAACGGGTGCTGCCTTGGCAGGTC
ACCATGGACCAATTAATATGCGCCTCTCTTTCCCACACCCACTATGATAT
GAACGGGGCATGTTGAAAGTACCTATACATGTTATGATGATTGGTCCTAC
CGTCGACGCCAATTTTAGAATGACTCGATTGATCTGCACAGGAAAACTCA
CGCGTAGTAGATCGTTGATGTCTCCTTGCTGTAAGGCTGTGAAGGACAAT
TTTCGTAAGCACACGGTGAACCTTCTCTTATTGCTGCTTCCCAGGAGGAT
GCCGAACGAACTCTGAACAAGGCGGGAATACCGTCGGTTCCTAAAATCCT
AAAAGGGGAGTTGTACGGAAACTTTCTAGCTTTCGCTAAAGGGTACCAAT
TTTCCTCTAAAATATGTCAACGGTTATGAAACTGTCATCCAATCATCATA
ACATACATCAGTGATGATAGTAGTTGCTGTACCGTGGTAGCTCTAGACGA
AAAGCTCGATATTTGGAGGACGTGCCCGGAGAGCTGTACGCGTATCCAAC
GTACAAGCGTTAGCTGACTGGATCATCGAGGAACAGGGCATGCCGCGACT
TCAACCGTTCTTATCCGCGAGGCTTGCTGCGTCTTGCGAGGCGTCAAAAG
TTTCGTGGTTGTGAATGAAGCCTCTGACTGCCCCAGATCAGGTTGACCAA
TCTTCCAAACGTGATGACTCGCACGCGTCGAACCTATGCGGTTCATGAGG
GTTTCAGCCCGGCGAGATGTTTGGAATCCTTTGAGCCACGCTGCCAATTC
AACAACATCGGGCTGCAATCTGCGCTGTTGAAGTATAGCGCCGACCGCCC
CCCCCCTCCCTAAATATTGGAACCCGCATTTACGGTGGTTTGACGCTTTA
ACCGTCAGAGAGCGTTATTCCTAGATAACGGGGGGAATGAACTGTACTGC
TGTTAGCCGGTTGGGTCGCAAGGACTCCCCGTTGTACTGATGTATGTATA
GAACGCTTTTATTCGTGCGAGTCGTGTCCAACCGTCTCATGCGACCGCCC
GGGCTCCCGCTTCTCCTTCGCACCGCCGCCGCCGCCGCCGCGTGTCCCCA
CTGACTGACGTCGTTGCAACCTCCAGCAGTTATCCCCAGAAGACGATGAG
GCGGAGGAGCCAGCTCGCCCACAGGTGGTTTGCGACAGGGTTTTCTCCAT
TTTTGGATATTTGAGATCTTGTGTTTTTGCGGTCGGTATTGCGGTCGGTA
CTACACGCAGAGAAGTGCTCTACAATTTGTGGACTCGATTTTCCGGTGCC
GACCGCCGCGCGGCCAAAAAGCAGCTCGAAAGTCGTTCTTAAAAAAGAGG
GTGGTTGTATGAGAGAAATCCGCTCGTTGGGTAGAACGTGGTAGAGTAAC
TTTGAGCTTCCTCAGGACTTGGATGAAGAACTACGTTAGGTCTTATAATG
GGTCTTAATATTAAGTCTACCCTACAACTATGGAGGATGAAGACTGCTGT
ACAACTGGGGCCTGAATAAAAACGCCATGGCTCTATGGTCCCCACCAAAA
TCCTCTCTCGAACATTGTCAAGAACCAAACTCCCGTTGAGAGCTTCAACC
GTCGCCTTCGGTCCCTGTCGTTTCTCGTTTCTCCCAAGGCGGGAGTGACG
GACAAAGTCTTTTTCGACGTGGAGATCAACGGAGAGCCGGCGGGCAGAGT
AATCATGGGGCTTTACGGGGAGATCGTGCCCAAAACGGCGGCGAACTTTG
TCGCCCTTTGCAAGGGGGATCCGGTGAGCTGATGTGCTGCCGGGGCTTAT
TTTTATCGCTTAAGCCGCCTATTATTAATAGCTGAAAGGAGTTGGTTTAC
AACAAACAAGCTTTGGGATATTCCGTTTGAAATCCGAATGGGTCTAAACC
GAATCAAAAGGTTACGATGTTCCTTCCGGGGGTGGATTGAATATATCCCC
CCCCCCCCCTACTGTGTGTGACTCCACTCAGAGCATTATAGCAAGAAGAT
TATTGCAAGAGCAGACCCTGCGGAATTGGGATGATGTGGCCAAAATATTT
CCAAAGCTGCGCGGCTTACGCCATCTGTGCTACGAATGGTGTGGAGGCGT
TTTTTTGGGGGGGGGGGAGACGGGAGAGAGGGGGGGGGTGCAGATTTACC
AACCTCGTTGTGTGTGTAATGCACCTTCGCGCTAACTGTACCTTTTCCGT
AGGAAATCCTGCTTCCGTCCAAAAGTACTTTTTAACCCTCATTTGTTTTA
GACGAAGCTGCTAAAAGTGTGGCGTCAGCTTTCCATATTCGAAAACGCCT
TGGTCGACGACCCGCTCACGCGTTGCCTCTATCCATTATTAAATTCTCAC
CCGTTCATGTTTACTTACTCTTAAACTGGAGTATAACTATGATAGCCTAA
TACTTTATAACATATTAAAAGCATTTCCGACCCCTTTCCATCACTTTCGG
TTTACAGTTACCGTTACCGTTACATTGCTGAAGTACTCGAGTCCAACGAA
CGTACTGAAATTAGTACCCCGGTGGGTAGGAAATGACTACGAAATCCAAC
CGTTTTCGACTCATCCCAGTTCACTGTTGTTAGCTGTAAACTGTGTTCAA
GCGTTCAAGCGTACGGCTCTGTGCGAAATGTGCTCATGCGTGGAATTTCC
CACCGTTTCCTAGCGTGCACTGAATGAAGCACTCGCTAAAGTACGTGATT
GTTGCAGTAGGCGATTATGTGTGTGCAAATTTAACGCCGTTTCAGAGGTT
CGAGTCATGTTCGCGCCGAGACAAGGCATCTACCACCACGCCGCCGCCTC
TATTAATACATACATATATATATACATATATATATACATAAATACACCTC
TAGTCTAGGTGACAACTAATGTATAATTGTCAGCCCTCGTGTTTTCCATC
CGCCGTTGCGCTGATTGATAACTTCTTCTCGCTAGCAGGCTAAGAGGCAG
CCTTTCGGATACAAGGGATCGCGGTTTCATCGCGTCATACCGGGATTTAT
GGTACAGGTGTGGGAAACATATCATTCTTATGTACGTACCAGGTAGGTAC
CAACTGCTACTACGGCTGTTGGAGGTATCGAATAAGTGGGTGTACTCGAT
CAATACGCCTCTAAGCTAAGTACCTTTCTTCCAACCTCGAACTGCCATGC
ATGTCAATGTACTCAAGTGATAGGCGCTGGAGCACTTACTAAATACTGTT
GTTCCAAGGGTCGTTTTACTCCAACTGTTGCGAAGCGTCATGATATTTTA
CTTATTTCAATAGAGCGCTAGAACCCTTTTTTTACTTTTTATTGTCTCCC
GAATATTGATGCAGTTATTTAGTACGAGCAGTTTCAGCCCTTTAGTACCG
AGGACTCGTTATTTTGCAACATAGCCAGCCTCCCCCTTCTATATATGACG
TACTTGAAGGATGTAACGGATACTTGAATGGATCAAACAGGGGGGAGACT
TCACCCGAGGGGATGGAACTGGCGGGAGTTCAATCTACGGTGGCAAGTTT
AAGGACGAAGACATGTCTCGCTTGAAGCACGTCGGGCCTGGGGTGAGAGA
AAAAAAAACACGCGCGTGTTCGTATACCAAAATGATTTATTCCGCTCGCC
ATATGGCCGGCTGAGACAGGCAGAAGAATCACTTTGTTGACCCCGAATTA
TAGTTAAAATACACAAAAAACACTATGAAAACTTTATTTTGTGTTTAGTG
TTGGAGAGGGGGTGTTGGTGGGGGAGGGGGTGTTGAGTCTCAAATCTTTT
GGTTTCGATAAATGTTGGCGTTTGTATACAGTTCAAGCCATTGCAGCGTT
GTACTGTTATCGAAGTAATGATGTTGTACTGTTATTATATTATGACCGTA
TAGGTGTGTAGTCTATATTGTATCATGGCCGTATAGGTGTGTAGTCTATA
TTATATTATGGCCCTATACAAGTCTAGTCTATATTTTGTTATCACCCTAT
AGAGCTAGGTGTGTAGGTCTGTATAATACTATGGCCCCATGAGACAGGTG
TGTAGTCTGTACCAAGGGTCATTTTATTACCCTATAAATGTGTAGTCTGT
ACGGTTTTAGGCCTATACTCTTATGGCCTTGTTTACGCGCGGTCTTTTCT
TTTTTATTAAGAAACCTGCACCCGAATCCTTAAAGACTAGAGCAGAGTTT
TCAGTTTTCAGCCATCGCTTGACGCAGCGTACGAATCTGCTGAAGAAAAA
ATGCTACAAAAAAAAGCTGGTACTTTCAACATGCCCACTTCATACCAAAA
GTGGGTGTGGGTAAGAGAGGCGCATATTAATTGGTCCATGGTGACCTGCC
AAGGCAGCACCCGTTTGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGG
CGGACTCTCGGCAGTGAACGCCATCGGTACGCAATTGCGTGACCCGATAA
ATTCGGGACTGACCCGATGACGTATGGCGGTTTAAATAAATAAATAAATG
GACGCCGCAACTCGGGAGGAATCCCGTAAGTGAACACCAGATTCATCCTA
AGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAACTCGTTTG
GCGAGATCAAATTCTCAGGCGCGAACGGGGACAGGGCAATGTTCATTTTC
CCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGATTGATCTT
TACTCTTGCTATATGTGTGACTATACATATACTTCGTATATATATTATAT
AAAGAGAGAGAGATGGGTGAGATCCTCCACGAATACGAGCGACATTGGAT
ACTAAGGCTTTAACGCTTCCTACAGTCGTCGGTGAGATTGACTATTGACA
ACTTACGGCATTAAACAACGAAAAATGACCCACACAACAGTAGTCTTATC
AATGTATCGAAAGATATATTCTCACGCAAACAGTATAAGGGTGTTGATGA
TGATGATGATGATGATAGCCCCCCGCAATCTATTTAACATCGCCTAAGGT
TCTGAGCATGGCCAATTCGGGGCCGGACACGAACGGCAGCCAGTTCTTCA
TCACCACAGCCCCCTGTGGGTGGCTTGACGGGAGGCATGTGGTGTTTGGC
CAAGTGCTCCAGGGCATGGACGTAGTCTACAGGTAAAACGTTCGACACGC
GTACGCTGCTTCTCGCAGTTGTTCACTTTTTTTCTTGATATTCGGAGGGG
CTCAGCTCATCCTCTGGGTGGGTGGCTAAATAAACTGCAATTTTTTTTGT
GTTCTTTGAAAACCTTTACGTTTTGCCCGCGCCTCCAAGAGAAAAACCAG
TGCCTCTTCCTTTAATACTGTGAAAATGGTAATATAGTGCTATAGTATTA
TAGAATACAGACATTTTTTAATAAAGTATTATGTTGTATACGGAGGTCTC
CTCGGCTTTTTCTCACTGCATTCGATATTTTCGACATTTTCCCTTCCAAA
GCTTGCCAATACATTCATAAAGTATTATGTTGTATACGGAGGAGGTCGCT
TCGGCTTTTTCTCACTGCATTCTATATTTTCGATATTTTCCCTTCCAAAG
CTTGCCAATACGTAAATGCATATACCGTACAATGTACCACTTTTGTCCAA
GATTTGACGACCCATCTCGCTACGTGGTTCGAGTTTTGTACGGGGTTACT
ATTTATATTATCACAAACCTGGTTACTACCGAGTTATGTCTTCGGAAATA
TTGTATCCCGAATTCGGGGATACAAATATACCAGGTATACAATACCGTGG
TATATATTTTAGAAAATAAATATGCGTTCTTCGTCACGTTGGCATGAAAT
TCACCCCGCACCCCTCCCTCACCCCGCCTCCCTTTTCTCTTTTCTCAGGA
TGGAAAGCCTGGGCTCTAGGAGCGGACGGGTCAGCGGAAACGTGAGATTT
TGACTTCGACGTCGGCCTAATCAAACTGGCTTTAATATAGGACGTTTGAT
CGTGATGTGGTGGGGGTAGCTGAGTTCTACAGTATGTGAATAACGTGTAC
AATAAGTATACCATGTGGTGTGTAGTTTAGCGTTAAAAATATTGTATTTT
ATTTTATAGTATTGTATTGTATTGTGTATACGGGTATAATGTTCCTACGT
TTACGAGCATAATATATTGTGCAGTTGTATGTATGTATGGTAAAGTTCGT
CTTGTGTGTGTGTATGTATGGTCACAAAAATAGCAAGAGTATTTATCAGC
CGGATAAGGTTGCCAATCCTGATCGGGGTCAACTGAACAGGGAAAATGAA
TTCTTCCTTGTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGATACGGGT
GCGGCAGTCCCGCCCGGCGTCAGCCTGCTCATCTCCATATTCAGGCCGAA
TCCGGTGCTTACTTACGGGATTCTTCCCGAGTTACAGCACAAAATATAGT
ACATCGTAGTATTAAACTGCGAGTTACAGCACAAAATTGTACAGTTACAT
ACTCTACTATAGTGTACATGAAAACTACTGCTGTGCTTCGTAGTTATAGA
TTGCTTATAGAGCGTGGTGTGTCGTGTAGCTAATACATTGTGTGTTTATA
GTCTGTACGAAGTATTTAGTATCCTTTGTACATTGGACTGCATATAGGGT
AATATCTACACCTGTTATGACAGTGACAGTGTGTAGCATCGAGCCATGTA
GTTTAAGTCCGGGGATAGAAATCTCCACATCCCCTGCTTCGAAGAGCTGG
AGCTAGAGCTGTGTGCAGAAGAGCTAGAGCTAGAGCGAGGTCCTTAGCTC
GATAAACTCTTGTTCAAATCTAAGGACCTCGGTAAACTGCTGCGGTCGCA
TCTCGCTGCTACTTGTTGCTACCGCGGGGACATCCGCCTATCAACCCCTT
GCGCTCTACTGCCATGTCTCTTTTTATAATCTTTATATTTGTAATGCCGC
GCTCTTCCCGATCATCGATGCCTGTACTGGGATTGTAATAACGTAGGCGA
CCATTGCCGGATCTGGCGTCGTCAAACGCGACAGCGCCGCACTGGAAACC
GAAGGGGAGAGCCAAGGCAACGATGGTTTCAGGGCGGAGGCGATGCGCGG
GGTTCGGGAGGACCTTCGACAGGAGAAGCTCGCCGTCAGACGCGTGGTCG
CGGCCGCGTTGGCGTCGTCGGGCACAAAAAAAAAAAGAGACGAGGAATAA
TACATTGGAATATAATATATTAGCTTAAAGGGTCCATCGAAAACTGCTGC
GCAGAGTTTTGGTTTTAATTTTTATTCCATACATGATCAGGGCAAGAAAA
AGAAACTCGTTTGGCACCTCATGAGCTATTTATTATGTTTATGTAGGAGT
CTTGAGAGTGCTACTAATTCAACCCCACGTGCAAGTGCATGTTGATAGGG
TGTAATTCGCAATTTTGATCAGGGGACACGTCCCCGGGGTTTCCAGTACA
TAATGGCATATAAATAGCGGGAAATAGAAGCCGTGTTTTTTTTCTTTCCC
CAGAAGGAAACGGTACTGTATGAAACTAATTATTTTTTTCCCCAGAAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1222:194261..202508-

>mRNA_A-nodosum_M_contig1222.12.1 ID=mRNA_A-nodosum_M_contig1222.12.1|Name=mRNA_A-nodosum_M_contig1222.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1047bp|location=Sequence derived from alignment at A-nodosum_M_contig1222:194261..202508- (Ascophyllum nodosum dioecious)
ATGCCCATGCCACGGGGTTCGCTGTGGCTCGCTTCGTCGCCAATGCATGG
GCGTTGGGCAACAACTTCGGTGACCCGTGCTTGGTTTGGGAGCGCTTCGG
GCGGTGGCTTCGACGCTGCTAACGCGGCTCGGGGTGGTGTAGCAAGTGGG
CCGGGCGGCGGGACACCACAGCCGCCCCCTCCACCTCGACCTGGACGAAG
CAGCACGGCGCTGACCTTGGTGGGGGGGATCCTCCTGTTTGCCGGAGGAT
ACATCGGAGCGCAGCTGCTAAAAGGGGGAGGGTCTTCGAAGCCGGAGATA
AATGATGGGCGCGATTTATCCCCAGAAGACGATGAGGCGGAGGAGCCAGC
TCGCCCACAGGCGGGAGTGACGGACAAAGTCTTTTTCGACGTGGAGATCA
ACGGAGAGCCGGCGGGCAGAGTAATCATGGGGCTTTACGGGGAGATCGTG
CCCAAAACGGCGGCGAACTTTGTCGCCCTTTGCAAGGGGGATCCGGCTAA
GAGGCAGCCTTTCGGATACAAGGGATCGCGGTTTCATCGCGTCATACCGG
GATTTATGGTACAGGGGGGAGACTTCACCCGAGGGGATGGAACTGGCGGG
AGTTCAATCTACGGTGGCAAGTTTAAGGACGAAGACATGTCTCGCTTGAA
GCACGTCGGGCCTGGGGTTCTGAGCATGGCCAATTCGGGGCCGGACACGA
ACGGCAGCCAGTTCTTCATCACCACAGCCCCCTGTGGGTGGCTTGACGGG
AGGCATGTGGTGTTTGGCCAAGTGCTCCAGGGCATGGACGTAGTCTACAG
GATGGAAAGCCTGGGCTCTAGGAGCGGACGGGTCAGCGGAAACGCGACCA
TTGCCGGATCTGGCGTCGTCAAACGCGACAGCGCCGCACTGGAAACCGAA
GGGGAGAGCCAAGGCAACGATGGTTTCAGGGCGGAGGCGATGCGCGGGGT
TCGGGAGGACCTTCGACAGGAGAAGCTCGCCGTCAGACGCGTGGTCGCGG
CCGCGTTGGCGTCGTCGGGCACAAAAAAAAAAAGAGACGAGGAATAA
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