mRNA_A-nodosum_M_contig1181.18.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: D7FNM0_ECTSI (Tetrahydrofolate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM0_ECTSI) HSP 1 Score: 155 bits (392), Expect = 9.540e-42 Identity = 75/125 (60.00%), Postives = 89/125 (71.20%), Query Frame = 1
Query: 10 AGC-KLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSMVGSQG--------MKVFLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWFI 357
AGC +LE+V LPT DP G Y+IGLAG+HQ VNA LALRLCA W+E +Q+Q + G Q + F SA+VH+GLS C WPGRCQVFRPP FP +T+YLDGAHTEQSM ACL WF+
Sbjct: 287 AGCGELEVVKPLPTRDPCGRAYEIGLAGDHQRVNAALALRLCAVWIEAHRQQQQQQHAGDQAPPAEKIHDTETFWASADVHRGLSCCVWPGRCQVFRPPAFPSVTIYLDGAHTEQSMRACLGWFV 411
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: A0A6H5L5N3_9PHAE (Tetrahydrofolate synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5N3_9PHAE) HSP 1 Score: 147 bits (370), Expect = 2.700e-39 Identity = 72/125 (57.60%), Postives = 85/125 (68.00%), Query Frame = 1
Query: 10 AGC-KLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSMVGSQG--------MKVFLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWFI 357
AGC +LE+V LP DP G Y+IGLAG+HQ VNA LALRLC W+E +Q+ G Q + F SAEVH+GLS C WPGRCQVFRPP FP +T++LDGAHTEQSM ACL WF+
Sbjct: 207 AGCSELEVVKPLPARDPCGRAYEIGLAGDHQRVNAALALRLCDVWIEAHRQQXXXXXAGDQAPPPEKIRETEAFWASAEVHRGLSCCVWPGRCQVFRPPAFPSVTIHLDGAHTEQSMRACLGWFV 331
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: A0A8C6TD94_9GOBI (Folylpolyglutamate synthase n=6 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6TD94_9GOBI) HSP 1 Score: 91.3 bits (225), Expect = 4.720e-19 Identity = 50/119 (42.02%), Postives = 73/119 (61.34%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSM-VGSQGMKVFLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
++E GC L++ +L +D +P +GLAG+HQL NA LAL+L AW++ + +S+ V MK+F+ GL++ WPGR Q + D +T YLDGAHT +SM AC+QWF
Sbjct: 242 AKEIGCSLQVCPSLVDYDSDCVPVTLGLAGQHQLPNASLALQLSHAWLKRKCLLGEKSVNVVQLSMKLFI-CVCCDLGLADTEWPGRNQTLKHGD---ITYYLDGAHTMRSMLACVQWF 356
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: H3BC11_LATCH (Folylpolyglutamate synthase n=3 Tax=Latimeria chalumnae TaxID=7897 RepID=H3BC11_LATCH) HSP 1 Score: 89.0 bits (219), Expect = 3.190e-18 Identity = 47/130 (36.15%), Postives = 70/130 (53.85%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQ-----SRSMVGSQGMKV-------FLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
++E GC L + L ++ G+ + +GLAGEHQ VNA LAL+LC W+ ++ + S + G+ + F + KGL + WPGR Q+ + PLT YLDGAHT S++ C +WF
Sbjct: 272 AREIGCPLYVCPGLEEYERDGVKFQLGLAGEHQRVNAALALQLCRTWLHRQRYPELDAETDSSPADTLGLSIHPPTALPFRLCSPTVKGLRDAEWPGRTQILK---HGPLTYYLDGAHTIGSVNVCTRWF 398
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: UPI001CFC1D65 (folylpolyglutamate synthase, mitochondrial isoform X1 n=3 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFC1D65) HSP 1 Score: 86.7 bits (213), Expect = 2.070e-17 Identity = 46/132 (34.85%), Postives = 68/132 (51.52%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSMVGSQGMKV--------------FLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
++E GC L + L + G+ +++G G+HQ +NA LAL+LC W+++RQ + V + V F S + +GL WPGR V PLT Y+DGAHT+ SM AC++WF
Sbjct: 278 AREIGCSLHLCPDLDDFELEGVKFELGPEGDHQRLNAALALQLCRTWLQQRQYQDF--FVAQDAVHVPELSTSGRPPLTSTFRPSLAMLEGLRNTEWPGRTHVL---SHGPLTYYIDGAHTKSSMQACIKWF 404
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: UPI001176D850 (folylpolyglutamate synthase, mitochondrial-like n=1 Tax=Salarias fasciatus TaxID=181472 RepID=UPI001176D850) HSP 1 Score: 86.3 bits (212), Expect = 2.760e-17 Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQ-QRQSRSMVGSQGMKV-FLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
++E C L + L ++ A P +GLAG HQ +NA LAL+L ++W++ + QR + ++ G F S + +GL E WPGR Q P+T YLDGAHT +SM AC+ WF
Sbjct: 280 AEEIQCPLVVSPELHQYEAAVGPVRLGLAGSHQRLNASLALQLSSSWLQRHKAQRAAHTLNGLNSQNASFQPSMAMLRGLQETEWPGRSQTL---SCGPVTYYLDGAHTAESMQACVSWF 396
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: UPI0003F05E01 (uncharacterized protein LOC102800632 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F05E01) HSP 1 Score: 85.9 bits (211), Expect = 3.870e-17 Identity = 48/130 (36.92%), Postives = 65/130 (50.00%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSMVGS------------QGMKVFLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
+ E +++V L +D G P +GLAGEHQ +NA LA++LC W+EE S G Q F A GL +C PGR Q+ + + +T YLDGAHT SM AC++WF
Sbjct: 200 ANEIHAPIQIVPDLDDYDWQGKPMKLGLAGEHQRINASLAIQLCRTWIEEHNLHHSDKRAGFGHTNTYSMDGNIQTASAFKLPATFISGLRDCCLPGRTQIIKHDN---VTYYLDGAHTPMSMKACVKWF 326
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: UPI001B887F3B (folylpolyglutamate synthase, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B887F3B) HSP 1 Score: 85.5 bits (210), Expect = 5.210e-17 Identity = 51/128 (39.84%), Postives = 68/128 (53.12%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSR--------SMVGSQGMKVFLRSAEVHKGLSECSWPGRCQ-VFRPPDFPPLTVYLDGAHTEQSMHACLQWFI 357
SQE G L V L AG +G+ G Q VNAGLAL+LC ++ + S+ + V+ S E KGL+ CSWPGR Q ++RP LT YLDGAHT++SM C++WF+
Sbjct: 238 SQEIGASLYRVPTLHEFCAAGQQIRLGIEGNIQFVNAGLALQLCRVFLHRTNKENQYVYDVLSVPSVKDIPMLPVYQLSPEETKGLALCSWPGRAQTIYRP----RLTYYLDGAHTKESMQQCVEWFL 361
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: UPI0001CBB6FF (folylpolyglutamate synthase, mitochondrial-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0001CBB6FF) HSP 1 Score: 85.1 bits (209), Expect = 7.150e-17 Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 1
Query: 1 SQEAGCKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQ-----QRQSRSMVGSQGMKVFLRSAE--------VHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWF 354
+ E +++V L T+D G P +G+AGEHQ +NA LA++LCA WMEE Q+ + + ++ + + +A +H GL C WPGR Q + + +T YLD AHT++S+ AC++WF
Sbjct: 307 ANEKHTPIQLVPNLDTYDWQGKPIKLGIAGEHQHMNASLAIQLCATWMEENNESIGDQKTNFESIYNENLNGSIPTAPAFTLPDTFIH-GLQNCYWPGRTQTIKREN---VTYYLDSAHTKKSIVACVKWF 433
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Match: A0A2T7NKS8_POMCA (Tetrahydrofolate synthase n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NKS8_POMCA) HSP 1 Score: 85.1 bits (209), Expect = 7.220e-17 Identity = 46/126 (36.51%), Postives = 63/126 (50.00%), Query Frame = 1
Query: 16 CKLEMVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQ------------QRQSRSMVGSQGMKVFLRSAEVHKGLSECSWPGRCQVFRPPDFPPLTVYLDGAHTEQSMHACLQWFI 357
C L + + L D +G+AG+ Q+ NAGLA+ LC W+ R Q Q S+ + + E+ GLS+CSWPGR Q R P +T YLDGAHT SM C++WF+
Sbjct: 336 CPLYVAEPLTAEDLMAYKLTLGIAGDRQVYNAGLAVHLCQVWLNSRNPGLGGQIYHLKNQPQVTSISSIPRLNKHQLTREMITGLSQCSWPGRNQTVRKPG---VTYYLDGAHTTDSMQQCVRWFL 458 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1181.18.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1181.18.1 >prot_A-nodosum_M_contig1181.18.1 ID=prot_A-nodosum_M_contig1181.18.1|Name=mRNA_A-nodosum_M_contig1181.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=110bp MVDALPTHDPAGIPYDIGLAGEHQLVNAGLALRLCAAWMEERQQRQSRSMback to top mRNA from alignment at A-nodosum_M_contig1181:186738..187537- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1181.18.1 ID=mRNA_A-nodosum_M_contig1181.18.1|Name=mRNA_A-nodosum_M_contig1181.18.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=800bp|location=Sequence derived from alignment at A-nodosum_M_contig1181:186738..187537- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1181:186738..187537- >mRNA_A-nodosum_M_contig1181.18.1 ID=mRNA_A-nodosum_M_contig1181.18.1|Name=mRNA_A-nodosum_M_contig1181.18.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=330bp|location=Sequence derived from alignment at A-nodosum_M_contig1181:186738..187537- (Ascophyllum nodosum dioecious)back to top |