mRNA_A-nodosum_M_contig1150.5.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5JN07_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN07_9PHAE) HSP 1 Score: 1420 bits (3675), Expect = 0.000e+0 Identity = 810/1489 (54.40%), Postives = 946/1489 (63.53%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPE-------TTVK----GNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKRSSPATTTEDNASASLARQANAEAAAAVGRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF------------------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHIIPKNRKLGRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAMPAMLRQRIAADEERAKNVHQAFMLTTDRDVDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEITGSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXP---SARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNL------PVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYA 4784
FTFY+QN YA+G+ LPACATDVAG+FTCAL GSK PEQLR FGARRSM AQTS++N RTYAEDG IPK IQ++L PVT++ N++ANARSTHA GNREPE T+ K GN + ++ A FIIETN V+P+G DMAN YR TRLR L+SMMK+S+P+ TT AS+ QANA++AAA RAPP L NAMVVTHTGN+VSDFYD GLFV AYFNLF HG+GGHLDVRRRP+S KEWAQ LR+RD RF KD+TF FCVCAL FRREA NNARWKI G+P A+ L S++PED+ AAAKE+EQGTG+ SF MQMGQP +WM + +DTNSPIVL++AG I+VTSRLK+D+PDY ERLRLVA +HV SAFFYHSV +AVLTC LRFGA DGDGGVLGRVK +GMTEEQRRLMLHCHLLVWVYGYNDFS FR L+DK+P+KYNKLARFLEQVIFNQVATL D NL GHEY ++ +S D+ S PDP V AKERIA+PPPTACFPR G+DRC VHD AF+RL+YLDLAE+TP +LHKCQ C+K+NH+DSCRF +A++RRL HINPYNP IQF+IRSNMDLKVLL D DAKGI FYILNYATKT NESQGE +EM VRLVRSCLCKQL SL+ GGPAAASKVFDL DAKIS TSPCPMG L+A+ GKLT QR+HL YRNRC+ D +HPLH +SYVVWHR VRVERY S+ + D +D++D+++ E P H P+ R GRA + Y CVG+ K W++V+R+ VMVNIMRDIPR DTQ+ HC LLLCMFLPFF+L +LK+SDESW AM + + D++RA + A M + D + E+++FL +YG D D+ SVIP+TA L TKI VDTA P+ SGRST+D+E DLT+IT SG+S AQQE E M+ S+ LA+STS XXXX S D VLDPYL+ LRS S A EFGLN+KQRLAF++F+NGMLAKK SP SD+LRLYIGGGA +GKSHVLK MKAFIECPALVGQIED RMLAVAF G+QA AVGG TIHS CQ G+LS NHDDQSP+ D QAIHWKGV MLA+EEVSMVGCELLVALNKAACSMFPM+KDKPFGNL P+V CG FNQLS + ++K + + SL+KYG DLFRMVNACV+LDQGSNRFSPTYA
Sbjct: 325 FTFYMQNLYAVGKHLPACATDVAGAFTCALFGSKQKPEQLRPLFGARRSM------------------------AQTSDENPRTYAEDGFIPKEIQDALVPVTEKNNTVANARSTHAQGNREPEEPGGDSSTSAKYGNNGNTDSSTDEGAPASFIIETNVVLPTGEDMANSREYRSTRLRALQSMMKKSAPSRTTNVATGASMREQANAKSAAAARRAPPFLPPNAMVVTHTGNMVSDFYDEGLFVVAYFNLFSHGIGGHLDVRRRPVSCKEWAQIFLRRRDGRFSKDKTFWFCVCALTFRREATNNARWKIKGGMPSDAAETLASISPEDIPAAAKELEQGTGSCD-------------------------------------SFIMQMGQPLWWMTFSPADTNSPIVLQLAGVTIDVTSRLKSDFPDYVERLRLVACDHVTSAFFYHSVTKAVLTCWLRFGATDGDGGVLGRVKACVGMTEEQRRLMLHCHLLVWVYGYNDFSIFRELMDKSPEKYNKLARFLEQVIFNQVATLTDTNLAFDGHEYEHMSRASEDTGTSEAGPDPQHVAAKERIARPPPTACFPRDGVDRCRVHDEAFSRLVYLDLAEITPAVSLHKCQLACNKFNHRDSCRFGYGKDGKAFEQETAVLRGPCTFHTNGNMTINGVVYPPGDPSTSSGIAAAAAFQAAFDASISELDDGDNCNSNPKADRFTAVLRRLGAHINPYNPFIQFVIRSNMDLKVLLEDIDAKGIMFYILNYATKTA------------------NESQGETSKEMVVRLVRSCLCKQLASLSFGGPAAASKVFDLSDAKISLYTSPCPMGSLIAFG----------------------------------------GKLTAKQRSHLRYRNRCDRTDTEHPLHCVSYVVWHRPVRVERYTP-GASNCVNRSDTDNDSSDDDMDE--PQHT-PQRR--GRASSDPYDCVGKYRKKWIQVVRRKAVMVNIMRDIPRADTQQEDHCRLLLCMFLPFFDLSNLKNSDESWESAMQRV-EDSDSWDKQRANKENDAPMSHSLDDAGHGAENDIFLIEYG---DDDNDSASVIPETAIGLRTKIVVDTAL--------------PVRSWHPRSGRSTEDVETDLTKITSWSGSSDPTYMAQQEKCLEAMTESEVASLAESTSXXXXXXXTTDSHEYDPKVLDPYLLELRSASQA------------------------------------------EFGLNRKQRLAFFVFSNGMLAKKVSPGSDSLRLYIGGGAKSGKSHVLKAMKAFIECPALVGQIEDSRMLAVAFRGQQAAAVGGTTIHSVCQVGRKTFRGSLSRNHDDQSPMKDTQAIHWKGVNMLAVEEVSMVGCELLVALNKAACSMFPMHKDKPFGNLQPFGNLPLVLCGGFNQLS----NFTCYWSWQLEKEKNMSSLVKYGADLFRMVNACVVLDQGSNRFSPTYA 1624
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5KIB1_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIB1_9PHAE) HSP 1 Score: 1259 bits (3259), Expect = 0.000e+0 Identity = 761/1651 (46.09%), Postives = 966/1651 (58.51%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPET---TVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKRSSPATTTEDNASASLARQANAEAAAAV--GRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCR------------------------------------------------------------------------------------------FSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYG-----------TGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALP-----KSSKIRGGDYSD--DNADNNLSEE--DPDHIIPKNR-------KLGRAPCNRYGCVGENSKNWVE------------------------VLRQAPVMVNIMRDIPRVDTQEVAH---------CL------------------------------------LLLCMFLPFFNLDDLKSSDESWPHAM--------------------PAMLRQRIAADEERAKNVHQAFMLTTDRD-VDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEITGSSGASSKKETA---QQEHAFETM------------------------------------------SSSQATYLADS---TSTSXXXXPSARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYA 4784
FTFY+Q++Y + LPAC D+AGS T LVG+ TP QLRR GARRSM+ L F LD+ + L G H LAR AQ S +NL T++ +G +PKAI +S+ V D+ S ANARSTHAH NREPE T + G+ + TAP ++E NAVM +G D A + RLR L S M P SLA+QA AEAAAAV GR P+ T+ AMV+TH+G LVSDF + GLF+ A+++LFPHG+GG LD RRR ++FK WA+ LL++RD RFRK RTFLFCVCALIFRREAI NAR+K+ + +A L VTP DL AA E+E G+ +S+LN+ IR LI MESV++GASWT + K+ TRM IS+ +QMGQP W+ ++ +D NSPIV+++AG I+VTS+LK+D+PDY E+LRLVA + VASA FYH+ I+ VLTCLLRFGA+DGDGGVLGRVKGY+GMTEEQ+RLMLH HLLVW+YGYNDF SFRAL+DKTP++Y +LAR+L+ ++FNQ+ATLAD+N + G + + + +++P DPL+ +AKE + PP + FP G A+ARLMYLDLA +TPGANLHKCQ TCHKYNHKDS R FS +RL THIN +NP+I F +RSNMD+KVLL+ SDAKG+ +YILNYATKTEQTLDVLLPLL+PVVERIR +S P +EMAVRLVRSCLCKQL+SL IGGPAAASKV L D K+SHS PCPM PLL WAS RD+P D NS G D +G+I++ +GKLTV QR HLLYR+RC PDD +HPLH SY W R VR+E+ L K RG D D D D + +E D D + P R + GR RY VGE W + ++R+ P + NI++D+P DTQ VAH CL LL+CMF+PFF LDDLK +DE+WP A+ ML Q++AA EE AK + +L+ D + ++ ++ LD YG D G SVIP T R+LT +FVD A+ TFV AGF+GD SSP + LSGRS +D +D++ + G G + TA +QE+ E + SSS A+ LA S T+T+ ++PY+I LR S GLSP A A ++RRDRTNAEVA TD+G AA QH +F IAQEFGLN+KQR AFYIFANG+LA+ ALRLYIGGGAG GK+HVL+ ++AF++ P + + R+L VAF GKQA AVGG T+HS C ++ S+G LSG H+ QS L +A HWKG +LAIEE+SM+ C LLV L+ ACSMFP++K +PFGN VV GDFNQL P+KA SLA G + ++R + +YG DLFRM NACV+L + SNRFSP+YA
Sbjct: 339 FTFYMQDAYGVQLKLPACDADIAGSITIVLVGANATPAQLRRLLGARRSMIEDLNTFLLDKDNALVGEHTLARQAQQSPENLATFSVNGDVPKAILDSIVAVQDKTGSYANARSTHAHENREPEVPANTDRAGGILRDDTLPTAPMVVEINAVMDTGEDRAVAESSKPARLRGLGSSMCSGDP----------SLAQQAAAEAAAAVRAGRPSPLGTDKAMVLTHSGKLVSDFSEPGLFIAAFYDLFPHGVGGPLDKRRRSLTFKRWARILLKRRDPRFRKHRTFLFCVCALIFRREAIENARFKLRGNISTRIASLLAKVTPADLSQAAAEME-GSFDFSSLNE--GIRSLIRMMESVSSGASWTIHNKRCTRMIAISYMIQMGQPLIWLTISPADHNSPIVMKLAGVDIDVTSKLKSDFPDYTEKLRLVASDPVASAQFYHNTIQGVLTCLLRFGASDGDGGVLGRVKGYVGMTEEQKRLMLHAHLLVWIYGYNDFVSFRALMDKTPRRYTELARYLDNIVFNQIATLADINRVMRGVDPAHLPPEVGNHDSAQPALDPLLRDAKECMPVPPARSTFPPQGEPPDEDLRDAYARLMYLDLACVTPGANLHKCQATCHKYNHKDSTRXXXXXXXXXXXCRFGFGDDGRPLAQETVVQRGRCVFDTSGNMTIDGVVYSHSSADDAAAAAANAAFQEAFDNAVADVRQELARSDPVSGRFSVEHKRLHTHINSFNPVIAFAVRSNMDIKVLLKGSDAKGLLYYILNYATKTEQTLDVLLPLLIPVVERIRADSGDAPEKEMAVRLVRSCLCKQLSSLPIGGPAAASKVLGLSDEKLSHSPVPCPMTPLLTWASKRDKPA-----------DADNSP--GDDXXXXXXXXXXXDDSGVIITPFQGKLTVAQRTHLLYRSRCRPDDTEHPLHQKSYFAWCREVRIEKCPTLHGRPRGKQPSARGNDDDDVDDVDDGHPGDECLDDDPVSPSGRTASTRAPRRGRPRATRYELVGEYQNKWEQGALHPYVRTRLYPLCTCLTFARTHIVREKPAISNIIKDVPTSDTQPVAHGFSSFPLFPCLSSARRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLLICMFVPFFTLDDLKRADETWPDALRRADDDNRWDPGTYPFRLNIEGMLAQKLAAAEETAKRRAERQLLSEKPDTLGDNVAGDVLLDSYGGE---DEPGESVIPATVRRMLTDLFVDDAFRTFVAAGFNGDGSSPDGSSPLLSGRSMEDACRDISFVCG--GTDLEAATAFISRQENELENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSSSSASALAGSDSHTTTAGSSNSIGVPKEDPIEPYIIELRKASQDGLSPEACRARDERRDRTNAEVADTDIGAVAALQHVAAFSIAQEFGLNRKQRQAFYIFANGLLAQCRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTD-DSDGCLSGAHEGQSTLPASKAAHWKGDVVLAIEEISMISCNLLVRLHNTACSMFPLHKGQPFGNRVVVMLGDFNQLRPIKARSLAHGTALQERRLGMTVTERYGSDLFRMANACVMLHE-SNRFSPSYA 1956
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: D7G3U9_ECTSI (ATP-dependent DNA helicase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U9_ECTSI) HSP 1 Score: 1245 bits (3222), Expect = 0.000e+0 Identity = 727/1479 (49.15%), Postives = 908/1479 (61.39%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPETTVKGNGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKRSSPATTTEDNASASLARQANAEAAAAVGRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF-----------------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSK--IRGGDYSDDNAD-NNLSEEDPDHIIPKNRKL----GRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAMPAMLRQRIAADEERAKNVHQ--AFMLTTDRDVDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEIT-GSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXPSARCDRSV-LDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYA 4784
FTFY+Q++Y + LPAC TD+AGSFTCALVG KP QLRR GARR MV+ LLDFQLD+ +RL G H LAR+AQ + +NL Y+ DGSIPKA+ +++ P+ D A + +NARSTHAHGNRE + T G G+++ +D TAPF+IETNAV+ +G D+A + RLR L M+ +S S SLA EAI NARWK+T + + ++ L +VTPEDL AA +E G G S L+DR I LI +MESV+AGASWT + K+STRM IS+ MQMGQP WM + +D NSPIV++M G I+V+S+LKA++PDY ++LRLVA + VASA F+H+ I+ VL+CLLRFGA+DGDGG+LGRVKGY+GMTEEQ+RL+LHCHLLVWV+GYNDF+SFR L+D+TP +Y +LA++L+ +IFNQVATLAD+ +HG T D+ + DP +AKE + PPT CFPR G DRC VHD +ARLMYLDLA +TPGANLHKC TC KYNH +SCRF SA IRRL +HIN +NP+IQF IRSNMDLKVLLRDSDAKGI FYILNY+TKTEQTLDVLLPLL+PVVERIR+E+ +E+AVRLVRSCLCKQL+SLNIGGPAAASKV D+PD KISH PCPM PLL WA SRD P +++ D +I++ +GKLTV QRA+LLYRNRC+PDD H LH MSYV WH+LVRV RY L + D SD ++D + + DP + P R+ GR RY VGE W +VLR+ P MVNIMRDIPR DTQ VAHC LLLCM++PFF LDDLK++ ML Q++AA EE AK Q +F + D+ DN ++E+ L DYG+ D G SVIP +A RL T+ FV+ A +F+ AGFSGDDS P + LSGR+ + +D + IT G+ A+S A+QE + + S+S A +AD S D + PYLI LR+ S GLS A + RR TNA VA+TDVG+ + QH V+ IAQEFGLN++QRLAF+IFANG+LA+ +ALR+YIGGGAG GKSHVLK +KAFIECPA+ ++ GR+L VA+ GKQA +VGG T+HS C S+ GNLSG+HDDQS L D +A+HWKGV +LAIEEVSMVGC LLV L+KAACSMFP++K KPFGN VV GDF+QLSPVKA SLA GA +RR + +YG DLFR NACV+LD+ SNRF+P YA
Sbjct: 374 FTFYMQDAYGVQLRLPACDTDIAGSFTCALVGCKPNLAQLRRLLGARRQMVQDLLDFQLDKDNRLVGQHTLAREAQLAPENLHGYSNDGSIPKAVLDAILPIKDSAKAYSNARSTHAHGNREDDPTPDG-GIESTDDGPTAPFVIETNAVVDTGDDLAVAGACKPNRLRDLGRAMQTAS--------GSPSLA--------------------------------------------------------------------------------------------------EAIENARWKLTGRISPADSRTLSAVTPEDLADAAAAMENGRGNGSVLSDRAGIAALIKTMESVHAGASWTPHNKRSTRMIAISYIMQMGQPLIWMTINPADVNSPIVVKMCGVDIDVSSKLKANFPDYVDKLRLVANDPVASADFFHNTIDGVLSCLLRFGASDGDGGILGRVKGYVGMTEEQKRLVLHCHLLVWVFGYNDFASFRDLMDRTPARYTELAQYLDNIIFNQVATLADITRVMHGGVEGISTLPVGDTCQT----DPNHRHAKECLPTAPPTNCFPRDGEDRCPVHDQDYARLMYLDLAGITPGANLHKCNATCTKYNHLNSCRFGYGEEGKPLVAETVVKRGRCVFDTKGNMIIDGVVYSVHSTDDAAAAASTPAFQTAFDESIATLIGDDGLPDPLSDRFSADIRRLHSHINSFNPVIQFAIRSNMDLKVLLRDSDAKGILFYILNYSTKTEQTLDVLLPLLVPVVERIRDEADRVDDKELAVRLVRSCLCKQLSSLNIGGPAAASKVLDMPDHKISHHPVPCPMSPLLTWACSRDGPLDGDTSR----PDDXXXXXXXXXXXXDVIITPFKGKLTVAQRAYLLYRNRCHPDDTGHVLHGMSYVFWHKLVRVIRYDPLDNRQPDLAQSSDASDTDSDCDTVQPGDP--VSPSGRRASARTGRPRACRYDFVGEYKHKWQQVLREKPAMVNIMRDIPRKDTQPVAHCRLLLCMYIPFFTLDDLKTT---------GMLAQKLAAAEETAKREAQNASFTASPDKQQDNSDKAEVHLCDYGD----DEPGRSVIPTSARRLQTEFFVNDALRSFLAAGFSGDDSLPESAFPLLSGRTRQQTMEDASHITLGTDVAASTLFVARQESSLQQKSTSCAASMADDAQPVSSPSYSTGTDGGPPVQPYLIRLRAASQEGLSDQARGERDARRVATNAAVAQTDVGRTSNLQHSVAVSIAQEFGLNRRQRLAFFIFANGLLAQSRPNPPEALRIYIGGGAGTGKSHVLKAIKAFIECPAIAAEVPRGRLLTVAYQGKQAASVGGTTVHSVC-STGSRDGGNLSGDHDDQSSLPDAKAMHWKGVSVLAIEEVSMVGCNLLVQLHKAACSMFPIHKAKPFGNRVVVMLGDFHQLSPVKAKSLACGAGVSTRRRDMTVTERYGADLFRSANACVMLDE-SNRFTPIYA 1720
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5L0L4_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L4_9PHAE) HSP 1 Score: 1245 bits (3222), Expect = 0.000e+0 Identity = 706/1370 (51.53%), Postives = 880/1370 (64.23%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPETTVKGNGMDTIED------STTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKR---SSPATTTEDNASASLARQANAEAAAAVGRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF-----------------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHI------------IPKNRK--LGRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAMP--------------------AMLRQRIAADEERAKNVHQAFMLTTDRD-VDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLS-GRSTKDIEQDLTEITGSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXPSARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAV 4355
FTFY+Q++Y + LPAC TD+AGSFTCALVG+KP+ QLR+ FGARR MV LL FQLD+ ++L GVH+LA++AQ S +NL TY +DGSIPKAI ++L PV D N+ ANARSTHAHGNREP+ G D T PFIIETNA+MPSG D+A +H + RLRTL ++ P+ T + ASL + A A+A AA G+ PP T+NA+V+TH+G +VSDF++ GLFVGAYF+LFPHG+GGHLD R RP+ K WAQ LLR+RDARFRK RTFL+CVCALIFRREAI+NARWK+ VP+ VA ++ VT +DL A A E+E G+ +S L DR IR+LI +MESV+AGASWT Y K+STRM ISF MQMGQP FW+ + +D NSPIV+ +AG +++VTSRLKAD+P Y ++LR VA + VASA F+H+ I+AVLTCLLRFGA DGDGGVLGRVKGY+GMTEEQ+RL LHCHLLVWVYGYNDF+SFR L+DKTP +Y +LA +L++VIFNQ+ATL+D+N + G + + ++ A P PD L+ AKER+A PPP++CFPR G R +VHD +A LMYLDLA LT GANLHKCQ TC K+NH DSCRF +A +RRL +HIN +NP+IQF IRSNMDLK+LLRDSDAKG+ FYILNY+TKTEQTLDVLLPLL PV ERIR +S G P +E+AVRLVRSCLCKQL+SL+IGGPAAASKVFDLPD +ISH T PC M PLL WA+SRD P + ++R + SD +I++ +GKLTV QR +LLY RC+P+D +P+H MSYVVWH+LVR+ER LP + D SDD+++++ ++ P +P R+ GR NR VG+ W +V+R+ MVNIMRDIPR DTQ VAH LLLCMF+PFFNLDDLK + ESW AM ML QR+AADEE AK + L RD T+ E+ +DDYG+ +D SV+P + RL T +FV A +F + P +A+L+ R +EQ + ++ + + TA ST+TS P L PYL+ LR + AGLS A + N +RD TNA VA TDVG A SQHPV+ IAQEFGLN+KQRLAFYIFANG+LA+ +ALRLYIGGGAG GKSHVLK MKAFI+CP L GQI GR+L VAF GK A AV
Sbjct: 258 FTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIARVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMESVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ----PSPEVETDAPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQTLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPL--DGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLER--CLPGRNHPAPTDRSDDDSESS-GDDXPXXXXXIGXXXXXXXDVPATRRPARGRPRANRLRFVGDFKNKWHQVMREKTAMVNIMRDIPRADTQPVAHARLLLCMFVPFFNLDDLKLNGESWTQAMARIDASNSWDPFSKPLRLNIKGMLAQRLAADEETAKRKAEQAALAEPRDRTGTDTDGELLVDDYGS---LDVDETSVMPVSIQRLKTDLFVKDALRSF--------GAGPDAASATLAMARQESALEQKMGHLSSLVDSVVEPSTA-------------------STATSTNAVP--------LAPYLMKLRDAAHAGLSVEARIQRNAKRDGTNAAVANTDVGAIATSQHPVAVSIAQEFGLNRKQRLAFYIFANGLLAQNRPDPPEALRLYIGGGAGTGKSHVLKAMKAFIDCPTLAGQIPPGRLLTVAFQGKMASAV 1579
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5K882_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K882_9PHAE) HSP 1 Score: 988 bits (2553), Expect = 0.000e+0 Identity = 577/1205 (47.88%), Postives = 705/1205 (58.51%), Query Frame = 3
Query: 1293 FYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF---------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQP-ELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHIIPKNRKLGRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAMP--------------------AMLRQRIAADEERA-KNVHQAFMLTTD---RDVDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEITGSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXPSARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKR 4679
FYD GLFV A+F+LFPHG+GGHLD RRR +SF+EWA+ LLRQRD RFRK ++FLFCV ALIFRREAI NARWK+T + + A+ L ++TPEDL AAAKE+EQG+ WS L +R A+R L+T+MESV+AG+SWT Y K+STRM IS MQ+GQP +WM + +DT SPI RLRLVA + VASA YHSV +AVLTCLLRF A DGDGGVL RVKGY+GMT+EQRRLMLH H+LVWVYG+NDFSSFR L+DK P+KYNKLARFLE+VIFNQV + A+VNL +HGH++ A+S P P E ++ P FP ++RC VHD ++ R MYLDLAEL PGA LH+CQPTCHK+N++D CRF +A +R LSTHINPYNPII FLIRSNMDL V+LRDSDA+G+ +Y+L+Y+TK+EQTLDVLLPLLLPVV+RIR+ ++GEP +E AVRLVRSCLCKQLTSLNIGGPAAASKVF LPDAKISH+T PCPMGPLLAWASSRD P E + + +G+ SD G++VS V G+LTVNQ AH+LY +RC+P+D +H LH MSYV W RLVR ERY K+ Y C V+RQ PVMVNIMRDIPR DT+ AHC LLLC+F+ F L+DLK +SW AM MLRQRIAADEERA + +AF+ + ++ + E E+ L+D G D D SV T +L + FV A+D FV AG G+DS T R V+ ++ P + N RRDR N EVARTD+G AA SQHPV+F IAQEFGLN++QRLAFYIFANG+ AKK SP S IE+G MLAVAF GKQA +VGG TIHS C +G+ +HDDQ LT+ QA+ W+G +LA++E SMVGCE+ +AL+KAAC +FPM+KDKPFGN+ VFCGDFNQL + + S S R
Sbjct: 230 FYDEGLFVAAFFDLFPHGIGGHLDERRRYMSFQEWAKILLRQRDPRFRKHKSFLFCVWALIFRREAIKNARWKLTGRMSRRTAETLATITPEDLAAAAKEMEQGSSVWSALANRNAVRTLLTTMESVHAGSSWTIYNKRSTRMIAISLIMQIGQPLWWMTIGPADTKSPI------------------------RLRLVASDPVASALLYHSVTDAVLTCLLRFDARDGDGGVLERVKGYLGMTKEQRRLMLHFHVLVWVYGFNDFSSFRDLMDKRPEKYNKLARFLERVIFNQVVSFANVNLAMHGHDHTP-------RASSEPEP--------ENVSDP--LHAFP---VERCFVHDDSYPRFMYLDLAELVPGAQLHRCQPTCHKFNNRDKCRFGYGDKGKSFEQETTVVRGPCTFHTNGSMTINGVDAFNECVSASSEPESDRFTATLRLLSTHINPYNPIIHFLIRSNMDLNVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLLPVVQRIRDHNEGEPAKETAVRLVRSCLCKQLTSLNIGGPAAASKVFGLPDAKISHTTVPCPMGPLLAWASSRDTPDEEPDDGDSTSGDXXXXXXXXXSDDQHGVVVSVVGGRLTVNQWAHVLYLHRCSPEDTEHALHGMSYVSWTRLVRTERYTPFKKA---------------------------------------YNC-------RQRVMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCIFVALFELEDLKRVGDSWTTAMANVEQHDRWDKRTKPFRLNIAGMLRQRIAADEERAYREEEEAFVSGSSGQGMEMGSDGEDEIILNDLGGDDDDDQ---SVFLVTKQGILMQAFVHDAHDAFVSAGLRGNDSQAAT-------------------------------------------------------------------RDVMCWFV------------PVECKSINARRDRNNQEVARTDIGAAAPSQHPVAFRIAQEFGLNREQRLAFYIFANGIFAKKRSPHSP---------------------------------IEEGGMLAVAFQGKQAASVGGTTIHSVCN--VPGRKGSGGKDHDDQKGLTEDQALSWEGKSVLAVKEASMVGCEMELALDKAACKVFPMHKDKPFGNMVAVFCGDFNQLRFLHSRSTYSDVIKFNTR 1227
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5K8N9_9PHAE (Helitron_like_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8N9_9PHAE) HSP 1 Score: 985 bits (2546), Expect = 0.000e+0 Identity = 532/1000 (53.20%), Postives = 669/1000 (66.90%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPETTVKGNGMDTIED------STTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKR---SSPATTTEDNASASLARQANAEAAAAVGRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF-----------------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQPELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHI------------IPKNRK--LGRAPCNRYGCVGENSKNWVEVLR 3311
FTFY+Q++Y + LPAC TD+AGSFTCALVG+KP+ QLR+ FGARR MV LL FQLD+ ++L GVH+LA++AQ S +NL TY +DGSIPKAI ++L PV D N+ ANARSTHAHGNREP+ G D T PFIIETNA+MPSG D+A +H + RLRTL ++ P+ T + ASL + A A+A AA G+ PP T+NA+V+TH+G +VSDF++ GLFVGAYF+LFPHG+GGHLD R RP+ K WAQ LLR+RDARFRK RTFL+CVCALIFRREAI+NARWK+ VP+ VA ++ VT +DL A A E+E G+ +S L DR IR+LI +ME V+AGASWT Y K+STRM ISF MQMGQP FW+ + +D NSPIV+ +AG +++VTSRLKAD+P Y ++LR VA + VASA F+H+ I+AVLTCLLRFGA DGDGGVLGRVKGY+GMTEEQ+RL LHCHLLVWVYGYNDF+SFR L+DKTP +Y +LA +L++VIFNQ+ATL+D+N + G + + ++ P PD L+ AKER+A PPP++CFPR G R +VHD +A LMYLDLA LT GANLHKCQ TC K+NH DSCRF +A +RRL +HIN +NP+IQF IRSNMDLK+LLRDSDAKG+ FYILNY+TKTEQ LDVLLPLL PV ERIR +S G P +E+AVRLVRSCLCKQL+SL+IGGPAAASKVFDLPD +ISH T PC M PLL WA+SRD P + ++R + SD +I++ +GKLTV QR +LLY RC+P+D +P+H MSYVVWH+LVR+ER LP + D SDD+++++ ++ P +P R+ GR NR VG+ W +V R
Sbjct: 178 FTFYMQDAYGVQLRLPACDTDIAGSFTCALVGAKPSVGQLRKLFGARRKMVEDLLAFQLDKDNQLVGVHQLAQEAQLSAENLDTYKDDGSIPKAIFDALLPVNDSTNAYANARSTHAHGNREPDDHEDGPAPPAAADHADDGAGATPPFIIETNAIMPSGDDLAVSSHAKPGRLRTLGVVLNSRHGGRPSAATAASGDASLPQMAAAQARAAAGQ-PPDGTQNALVLTHSGQMVSDFHNPGLFVGAYFDLFPHGVGGHLDKRTRPLDLKRWAQILLRRRDARFRKSRTFLYCVCALIFRREAISNARWKLRGRVPRDVASRIAGVTAQDLRAVAAEMETGSSGFSALADRPGIRDLIKNMEFVHAGASWTIYNKRSTRMIAISFIMQMGQPLFWLTINPADVNSPIVMVLAGVELDVTSRLKADFPAYADKLRFVANDPVASADFFHATIDAVLTCLLRFGACDGDGGVLGRVKGYVGMTEEQKRLTLHCHLLVWVYGYNDFASFRELMDKTPTRYFELAEYLDKVIFNQIATLSDINHVMRGVQ----PSPEVETDVPAPPPDQLMRPAKERMAVPPPSSCFPRDGQPRNNVHDDKYAHLMYLDLAGLTGGANLHKCQATCRKFNHGDSCRFGFGDKGKPLVQKTVVQRGRCVFDTDGNMTINGIVYSWSSAKDAAAAASNEAFRAAFDASIAHLVNDNGLPDPLSDRFTAELRRLHSHINSFNPVIQFAIRSNMDLKILLRDSDAKGLLFYILNYSTKTEQNLDVLLPLLAPVAERIREQSDGAPEKELAVRLVRSCLCKQLSSLSIGGPAAASKVFDLPDHRISHPTVPCSMSPLLTWATSRDGPL--DGEVDRVDDSSDXXXXNDSDVEESIIITPFKGKLTVAQRVYLLYLKRCDPNDTTNPVHGMSYVVWHKLVRLER--CLPGRNHPAPTDRSDDDSESS-GDDXPXXXXXIGXXXXXXXDVPATRRPARGRPRANRLRFVGDFKNKWHQVPR 1167
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5J5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5A5_9PHAE) HSP 1 Score: 769 bits (1985), Expect = 2.830e-250 Identity = 517/1240 (41.69%), Postives = 635/1240 (51.21%), Query Frame = 3
Query: 843 SEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPETTVKG---------------------NGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKRSSPATTTEDNASASLARQANAEAAAAVGRAPPVLTENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF-----------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQP-ELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHIIPKNRKLGRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAMPAMLRQRIAADEERAKNVHQAFMLTTDRDVDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEITGSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXPSARCDRS---VLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFI 4274
SE NL+ Y EDGS P+AIQ++L VTDR N++A ARSTHAHGNREPE V G NG D +D P + ET AVMPSG D+A + YR TRLR L++ + S + ASLA+ K ++FLF VC LIFRREAI NARWK+T V + A+ L ++TPEDL AA KE+EQG+ AWS L +R A+R L+T+MESV+AG+SWT Y KS R VASA +YHSV +AVLT LLR A DGDGGVLGRVKGY+GMTEEQRR+MLH H++VWVYG+N+FSSFR L+DK P+KY KLARFLE+VIFNQVA+ ADVNL +HGH++ +S + DPLV AKER+AQPP ACFPR G+ RC VHD ++ARLMYLDLAEL PGA LH+CQPTCHK+N+++ CRF +A +RRLSTHINPYNPII FLIRSNMD KV+LRDSDA+G+ +Y+L+Y+TK+EQTLDVLLPLL VV+R R E +GEP +E AVRLVRSCLCKQLTSLNI GPAAASKVF LPDAKISH+T+PC M P LAWA SRD P E + + +G+ SD G++VS V G+LTVNQRAH+LY +RC L+++ PC V+RQ PVMVNIMRDIPR DT+ AHC LLLC F+ FF DDLK +SW AM A + Q D+ +A ML I+ + A+R + FV + G G + D+E IT + S++ A+QE +M +SQA L T+T+ P + S ++PYL+ L T AGLS S+++ASN RR+R N EVARTD+G A SQHPV+F IAQEFGLN++QR AFYIFAN M AKK S S AL LYIGGGAGA KS VLK +K FI
Sbjct: 217 SEANLQGYPEDGSTPQAIQDALISVTDRRNTVAAARSTHAHGNREPEQPVGGTSGSDGQRDGEDSDRQGSGDVNGDDD-DDGVLPPCVNETKAVMPSGSDLAKSSQYRPTRLRALQAELSLS------DSTGPASLAQ---------------------------------------------------------------------------------KHKSFLFFVCVLIFRREAIKNARWKLTGRVSRRTAETLATITPEDLAAAGKEMEQGSSAWSALANRNAVRTLLTTMESVHAGSSWTIY-NKSERS------------------------------------------------------------VASALYYHSVTDAVLTWLLRVDARDGDGGVLGRVKGYLGMTEEQRRVMLHSHVVVWVYGFNEFSSFRDLMDKRPEKY-KLARFLERVIFNQVASFADVNLAMHGHDHTPRASSELEPEN---VSDPLVRPAKERMAQPPSPACFPRQGVKRCPVHDDSYARLMYLDLAELVPGAQLHRCQPTCHKFNNRNKCRFRYGDKAKSLEQETTLFRGPCTFHTNGGMTISGVVYPPGDPSTAESMVAAQAFQNAFNECVSVASEPESDRFTATVRRLSTHINPYNPIIHFLIRSNMDSKVMLRDSDARGLLYYVLHYSTKSEQTLDVLLPLLFLVVQRKRCEKEGEPAKETAVRLVRSCLCKQLTSLNIDGPAAASKVFGLPDAKISHTTAPCSMRPSLAWAPSRDAPDEEPDDGDSTSGDXXXXXXXXASDDQHGVVVSVVGGRLTVNQRAHVLYLHRC-------------------LLKIRSM-----------------------------------------PCT--------------VMRQGPVMVNIMRDIPRSDTKPEAHCRLLLCTFVTFFEQDDLKLVGDSWTTAM-ANVEQHDRWDKHKAIPTKHTGMLRL--------------------------RIAADEEWANRKEEEAFVSGNRGQEIEMGSDG---------------GSGDVEC----ITTLTATSAEAALARQESTLTSMKNSQAASLGGRTATTPNADPHPPTNHSDPVAIEPYLVQLHETLCAGLSQSSVIASNARRNRNNQEVARTDMGAAELSQHPVAFRIAQEFGLNREQRFAFYIFANCMFAKKRS-HSPALILYIGGGAGAEKSWVLKAIKTFI 1182
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE) HSP 1 Score: 701 bits (1810), Expect = 8.810e-210 Identity = 401/945 (42.43%), Postives = 539/945 (57.04%), Query Frame = 3
Query: 612 FTFYLQNSYAIGQDLPACATDVAGSFTCALVGSKPTPEQLRRFFGARRSMVRALLDFQLDRSDRLAGVHKLARDAQTSEDNLRTYAEDGSIPKAIQESLFPVTDRANSIANARSTHAHGNREPETTVKG--NGMDTIEDSTTAPFIIETNAVMPSGGDMANVTHYRGTRLRTLRSMMKRSSPATTTEDNASASLARQANAEAAAAVGRAPPVL----------------------TENAMVVTHTGNLVSDFYDNGLFVGAYFNLFPHGLGGHLDVRRRPISFKEWAQSLLRQRDARFRKDRTFLFCVCALIFRREAINNARWKITRGVPKSVAQQLVSVTPEDLGAAAKEIEQGTGAWSTLNDRLAIRELITSMESVNAGASWTTYIKKSTRMKGISFTMQMGQPFFWMAVAQSDTNSPIVLEMAGFKINVTSRLKADYPDYPERLRLVAGNHVASAFFYHSVIEAVLTCLLRFGAADGDGGVLGRVKGYIGMTEEQRRLMLHCHLLVWVYGYNDFSSFRALLDKTPKKYNKLARFLEQVIFNQVATLADVNLTLHGHEYNDVTASSRDSAASRPTPDPLVVNAKERIAQPPPTACFPRGGIDRCHVHDIAFARLMYLDLAELTPGANLHKCQPTCHKYNHKDSCRF----------------------------------------------------------------------------------SAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQ--PELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVE 3122
FTF+ QN+Y + + LP C TD+AGS TCALVG++PT QLR+ GARRS ++ L+DFQ D ++LAG H L + AQTS +NL T+ +DGS+P I +SL P D + A S++ NR+PET V +D FII+ AV+PSG + A + R RLRTL++ + S+ +A A + A A G P T+N +V+ HTG +V DF + G+ + AYF+LFPHG+GGHLD R+RP++F +WA+ LLR+RD RFRK+RTF+FC+ A+IFRREAI+NA WK+T V + VAQ+L +TP+DL A A+EIE GT L +R A R+LI +M+SVN ASWT + K++ RMK IS +Q+GQP FWM + +D+NSP+V+++AG ++V+SRLK D P Y +RL+L+A + VASA F+H +I+AV+ LLRFGA DGDGGVLGRVK Y+GMTEEQRRL LHCHLLVWVY +LA FL + IF+QVA+ DV + G +++ + P+ DPL A E IA PPP+ACFP G++R D + + +LAE+T AN+H+C TCHK+ H +SCRF +A RR +N YN II F RSNMD+K LLRDSDA+G FYILNY+TKTE T+D LL +L PVVERI++E++G P A +LVR+C CK + + +G PAAASKV + DAK + CPM PLLA AS+ P SN N + DY +G I++ GK+ ++ H LY RC P+D +HP H M Y VW RLVR+E
Sbjct: 2376 FTFFFQNAYGVEKVLPTCDTDIAGSMTCALVGARPTEAQLRKLLGARRSRIQELMDFQRDEQNQLAGEHVLFKRAQTSVENLDTFPQDGSVPPRILDSLIPAVDASRLREKASSSYVRDNRQPETPVDDADEAVDGQNADDNPAFIIDNCAVIPSGREQAVSSESRPERLRTLQTDLINSA-------GTAAPTAMDVEEDDAQAAGSTPSXXXXXXXXXXXXXXXXXXXXXXEQTKNMLVLPHTGKMVEDFNEPGVMIAAYFDLFPHGVGGHLDKRQRPLNFTKWARCLLRRRDPRFRKNRTFVFCLAAIIFRREAISNAHWKLTGRVSRGVAQELDGITPDDLLAVAREIEGGTSTAKALANRPAARQLIRTMQSVNGDASWTMFNKRTLRMKAISMIIQLGQPLFWMTINPADSNSPVVMKLAGVDLDVSSRLKTDLPQYVKRLQLIAADPVASAEFFHVMIDAVMKTLLRFGAKDGDGGVLGRVKAYVGMTEEQRRLTLHCHLLVWVY-------------------QELASFLSRTIFSQVASDEDVQHAMTG---GIEPSNAPEDGTPPPSRDPLKRPATETIAMPPPSACFPPPGVERDVAADEQYLGPLRAELAEITKAANMHQCTYTCHKHGHANSCRFGFGKDGKPLESRTCVQRGFRQIYPNGDSVVGGVLYSASQSRDAIAAADAAAAKEEEEIQKFADESDDVSRGKLDFATVAERFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLEYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIE 3291
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5JT57_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT57_9PHAE) HSP 1 Score: 474 bits (1220), Expect = 7.540e-140 Identity = 318/800 (39.75%), Postives = 432/800 (54.00%), Query Frame = 3
Query: 2478 RFSAIIRRLSTHINPYNPIIQFLIRSNMDLKVLLRDSDAKGIFFYILNYATKTEQTLDVLLPLLLPVVERIRNESQGEPVREMAVRLVRSCLCKQLTSLNIGGPAAASKVFDLPDAKISHSTSPCPMGPLLAWASSRDQ--PELNNSNINRNGEDGSNSDEEGSDYGTGMIVSAVEGKLTVNQRAHLLYRNRCNPDDDDHPLHDMSYVVWHRLVRVERYIALPKSSKIRGGDYSDDNADNNLSEEDPDHIIPK----NRKLGRAPCNRYGCVGENSKNWVEVLRQAPVMVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDE-SWPHAM--------------------PAMLRQRIAADEE-RAKNVHQAFMLTTDRDVDNHTESEMFLDDYG-NSHDMDSGGISVIP--QTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDLTEITGSSGASSKKETAQQEHAFETMSSSQATYLADSTSTSXXXXPSARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNKDKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYA 4784
RF+A RR +N YN II F RSNMD+K LLRDSDA+G FYILNY+TKTE T+D LL +L PVVERI++E++G P A +LVR+C CK + + +G PAAASKV DAK + CPM PLLA AS+ P SN N + DY +G I++ GK+ ++ H LY RC P+D +HP H M Y VW RLVR+E P+ K D++ ++ RK GR R+ VG + + +V R+ P+++NIMRD+P+ DTQ H LLLC++ PFF + DL+ DE SW A+ MLRQR AADEE RA +V Q+ L R + +++ D +G + D D G +V+P + AHR+ +V+ A D + AGFS D+ + A LSGRS+ I D A ++ +T + AT + D P + L PYL LRS S AGLS A + RR TN VA+TDVG+++ QH IA EFGLN+KQRLAF+IF +A+ P +ALRL++ GGAG+GKS+VL+ + A I+CPAL G ++ G +L VAF GK A VGG T+HS ++G + N Q+ L++ +A W LAIEEVSMV C L +L+KAA S+ P + PF + V GD NQL+PV A S+ GA+ + K+ + G F NA V+LD+ +NRFS TYA
Sbjct: 203 RFTAKHRREHRKVNSYNLIIAFCTRSNMDIKALLRDSDARGALFYILNYSTKTETTMDALLNVLAPVVERIKDEAEGAPAAVTAAQLVRACSCKTVAHMPVGAPAAASKVLGYTDAKSAPDARTCPMKPLLALASASFDALPPAEGSNENADXXXXXXXXXXXXDYHSGAILNTSGGKIRISISLHELYLRRCLPNDTEHPYHGMCYAVWARLVRIEN---TPRKQKPARRPNDDNDRESGXXXXXXXXXXXXXXAARRKRGRPLAKRHDFVGLPTVHKQQVTREEPILINIMRDVPKQDTQPENHAQLLLCLYKPFFKIHDLRLPDEASWAVALRRTEESGLWDQRSTSMRINIKGMLRQRHAADEENRASSVLQS--LRRRRPLGACGGADIDGDIFGADVDDTDPAGPNVMPPARNAHRV--SAYVNNAVDRCLDAGFSRTDNDRLPQAALLSGRSSHQIAAD----------------ASKDALLKTRETEAATAVPDDAPDVAATKP---YNADALSPYLRDLRSKSEAGLSKDAKDRMDRRRKETNEAVAKTDVGRSSPQQHDAVRRIADEFGLNRKQRLAFFIFGAAWIARDGVPTPNALRLHVSGGAGSGKSYVLRAIVALIDCPALKGVVQPGGLLTVAFQGKAAANVGGNTVHSVADVPRKNNDGAMD-NTIGQTGLSEAKAARWTHAAALAIEEVSMVSCLQLGSLHKAAVSVRPSSASLPFAGMIYVTFGDLNQLAPVSAKSVVFGATDSSELHKMTHTERIGHSNFWAANAAVVLDETNNRFSATYA 975
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Match: A0A6H5KXW4_9PHAE (ATP-dependent DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW4_9PHAE) HSP 1 Score: 386 bits (992), Expect = 1.310e-112 Identity = 240/521 (46.07%), Postives = 315/521 (60.46%), Query Frame = 3
Query: 3324 MVNIMRDIPRVDTQEVAHCLLLLCMFLPFFNLDDLKSSDESWPHAM--------------------PAMLRQRIAADEERAKNVHQAFMLTTDRD--VDNHTESEMFLDDYGNSHDMDSGGISVIPQTAHRLLTKIFVDTAYDTFVHAGFSGDDSSPITPNASLSGRSTKDIEQDL------TEITGSSGASSKKETAQQEHAFETM-----SSSQATYLADSTSTSXXXXPSARCDRSVLDPYLIHLRSTSSAGLSPSALLASNDRRDRTNAEVARTDVGQAAASQHPVSFLIAQEFGLNQKQRLAFYIFANGMLAKKTSPRSDALRLYIGGGAGAGKSHVLKPMKAFIECPALVGQIEDGRMLAVAFPGKQAVAVGGVTIHSTCQSSAVASEGNLSGNHDDQSPLTDKQAIHWKGVGMLAIEEVSMVGCELLVALNKAACSMFPMNK-DKPFGNLPVVFCGDFNQLSPVKATSLASGASSMKKRRKLPSLIKYGVDLFRMVNACVILDQGSNRFSPTYA 4784
M NIM+D+PR DTQ VAH LL+C+F+PFF LDDLK +DE+WP A+ ML Q++AA EE AK H L +++ + ++ ++ LD YG D G SVIP T R+LT +FV+ A+ TFV AGF+GD S+ + LSGRS +D D+ T++ ++ + S++E S S T A S+S + L P ++ LR S GLSP A A ++RRDRTNAEVA TD+G AA QH +F IAQEFGLN+KQR AFYIFANG+L++ ALRLYIGGGAG GK+HVL+ ++AF++ P + + R+L VAF GKQA AVGG T+HS C ++ S G LSG H+ QS L +A HW+ +LAIEE SM+ C LLV L+ ACSMFP++K +PFGN VV GDFNQL P+KA SLA + ++R + +YG DLFRM NACV+LD+ SNRFSPTYA
Sbjct: 1 MANIMKDVPRSDTQPVAHARLLICLFVPFFTLDDLKRADETWPDALRRADDKNRWDPGTYPFRLNIQGMLAQKLAAAEETAKR-HAERQLLSEKTHALGDNMAGDVLLDSYGGE---DEPGESVIPATVRRMLTDLFVNDAFRTFVAAGFNGDGSTRDASSPLLSGRSMEDTCLDISFVRGGTDLEAATASMSRQENXXXXXXXXXXXXXXGSDSNRTPAASSSSFGVP-------NEDPLGPCIMELRKASQDGLSPEACRARDERRDRTNAEVAGTDIGAVAALQHVAAFTIAQEFGLNRKQRQAFYIFANGLLSQFRPDPPPALRLYIGGGAGTGKTHVLRAIRAFVDSPPVKRLLPRARLLCVAFQGKQAAAVGGTTVHSVCPNTG-DSYGCLSGAHEGQSTLPASEAAHWQRDVILAIEESSMISCNLLVRLHNTACSMFPLHKGQQPFGNRVVVMLGDFNQLRPIKARSLAHLTALQERRLGMTVTERYGSDLFRMANACVMLDE-SNRFSPTYA 508 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1150.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1150.5.1 >prot_A-nodosum_M_contig1150.5.1 ID=prot_A-nodosum_M_contig1150.5.1|Name=mRNA_A-nodosum_M_contig1150.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=327bp MDDVLHPSVLHKCASDFVAHVVGASHSVSCAVCDLLYTKRDCMWVTAENLback to top mRNA from alignment at A-nodosum_M_contig1150:192148..198641- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1150.5.1 ID=mRNA_A-nodosum_M_contig1150.5.1|Name=mRNA_A-nodosum_M_contig1150.5.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=6494bp|location=Sequence derived from alignment at A-nodosum_M_contig1150:192148..198641- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1150:192148..198641- >mRNA_A-nodosum_M_contig1150.5.1 ID=mRNA_A-nodosum_M_contig1150.5.1|Name=mRNA_A-nodosum_M_contig1150.5.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=981bp|location=Sequence derived from alignment at A-nodosum_M_contig1150:192148..198641- (Ascophyllum nodosum dioecious)back to top |