mRNA_A-nodosum_M_contig113.82.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: D7G1B2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1B2_ECTSI) HSP 1 Score: 267 bits (682), Expect = 1.390e-74 Identity = 127/196 (64.80%), Postives = 151/196 (77.04%), Query Frame = 3
Query: 3 DGASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAAD-------------AAGGKAAMDGEVVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGFTTAETEMGARLERLRKTLRGKTTRPL 551
DGASY T+YN I+ EEPT+++VESM GEVFGGFA SAWSSGCQYYGTG+CFL+K+EG R ES + E+ +D A K ++G++ + WTGMN YLQYSD G+ MGGGG + +FGLF+G+DFL GSTG CDT+ NPPLCSQ QFQVSQVE+WGFTTA+TEMGARLERLRKTLRGKTTRPL
Sbjct: 477 DGASYTTLYNRIQGEEPTFLIVESMRGEVFGGFATSAWSSGCQYYGTGECFLFKMEGERVTVESEEEQTENDSDDRSADGRTGSSETVAASKTLLEGDLTAFGWTGMNMYLQYSDGKGIAMGGGGADGSFGLFIGEDFLTGSTGKCDTYGNPPLCSQEQFQVSQVEVWGFTTADTEMGARLERLRKTLRGKTTRPL 672
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A4D9DBE4_9STRA (TLDc domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBE4_9STRA) HSP 1 Score: 107 bits (266), Expect = 2.850e-21 Identity = 65/175 (37.14%), Postives = 90/175 (51.43%), Query Frame = 3
Query: 3 DGASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAWS-----SGCQYYGTGQCFLYKIEGGRTP-------CESG-----DASEESAADAAGGKAAMDGEVVTY-QWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGF 473
DG+S+ T Y +K PT +V+ S EVFGGF + W+ +G YYGTG+ FLYK+ E+G D E+ K++ +++ + WT NTY S LGMGGGG E FGLF+GD+FL GS+G +TF N PL + F++ E W
Sbjct: 105 DGSSFQTFYRQVKSVSPTILVIRSKENEVFGGFTTTPWAVHTTAAGPLYYGTGESFLYKVRPSHRSQGSSLSISENGIFNAEDEEEDLKRPGENEKSSTRRKMIQFFPWTRENTYYMLSTENSLGMGGGGGE--FGLFIGDNFLFGSSGESETFYNAPLARHKTFEILSFECWSL 277
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A7S2PL69_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PL69_9STRA) HSP 1 Score: 108 bits (270), Expect = 5.110e-21 Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 3
Query: 3 DGASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAW----SSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAGGKAAMDGEVVTYQWTGMNTYLQYSDCAG--LGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGFTTA 482
DG S TM + + T +V++S G++FG FA W S G +YG+GQ FL+ ++ ++ E +V Y+W G N YLQ D + + MGGGG +FGL V D F GSTG C+TF NP LCS +F + +E++GF TA
Sbjct: 335 DGDSMKTMLYLVSRYRYTLMVIKSTRGDIFGAFANDTWEERGSRGKTFYGSGQSFLFSVKSSLAKVDNAPICEMQPY-----APTNRDQVEIYKWKGTNVYLQMCDTSNDRIAMGGGGNSGSFGLCVEDSFRRGSTGYCETFGNPRLCSDNEFDILDMEMYGFVTA 495
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A7S4R8M2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R8M2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.680e-17 Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 3
Query: 3 DGASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAW-------SSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAG-----GKAAMDG--EVVTYQWTGMNTYLQYSDCAG--LGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQ-FQVSQVEIWGFTT 479
DG ++ + +E+ T +V+++ G+VFGG+A +AW +SG +YG+ Q L+K+ + + D + ++ADA G G+ + ++ Y+WTG N Y+Q D + GGGG E +FGL V DDF GSTG CDTF N LC + F V +E WGF T
Sbjct: 338 DGDAFDAFLRLVHKEQRTLLVIKTSKGDVFGGYAETAWEVMHRRENSG-GFYGSAQACLFKLL--KKNVSNDDCA--TSADANGYNDDIGRQQLQNSNDINVYRWTGRNRYIQLCDSTHKMIAFGGGGTEGSFGLTVEDDFRRGSTGYCDTFGNDALCHDGEDFDVIDLECWGFIT 508
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A7S3XVJ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVJ4_HETAK) HSP 1 Score: 86.7 bits (213), Expect = 4.350e-16 Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 3
Query: 273 WTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGFTTAETEMGARLERLRKTLRGK 536
WT MN++ QYS L MGGGGE AF F+GDDFL G+T + +TF N L F+V+ +E WGFT A +E AR++RL++ K
Sbjct: 13 WTAMNSHFQYSTDRSLAMGGGGEGFAF--FIGDDFLQGTTAASETFGNGALAGTPTFKVANIEAWGFTMANSETAARIQRLKQVRVAK 98
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A077WWV6_9FUNG (TLDc domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WWV6_9FUNG) HSP 1 Score: 89.7 bits (221), Expect = 1.380e-15 Identity = 51/157 (32.48%), Postives = 83/157 (52.87%), Query Frame = 3
Query: 6 GASYATMYNNIKQE-EPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAGGKAAMDGEVVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGF 473
G+S T+++N+++ P +V+++ + EVFGG+ + +YYG+G+CFL++++ +SG+ + Y+W G N YL YSD L +GGG + GL++ D L+G T C TF N PL F+ +EIWGF
Sbjct: 200 GSSLQTLFHNVQKHLGPCLLVIQTTDEEVFGGYLSEPLHMESRYYGSGECFLWRMD-----MQSGNPRP-----------------LVYRWAGKNDYLIYSDRNYLSLGGG--DGKVGLWLHGDLLHGHTEPCATFENEPLADHTTFECLALEIWGF 332
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: M2Y7X2_GALSU (TLDc domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7X2_GALSU) HSP 1 Score: 89.4 bits (220), Expect = 6.450e-15 Identity = 47/154 (30.52%), Postives = 77/154 (50.00%), Query Frame = 3
Query: 6 GASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAGGKAAMDGEVVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIW 467
G S T Y+ + ++ PT +++++ +G+ FG +A+ W YYGTG+CF++ + +P E Y+W+ N Q S L +GGG F +++ DF++GS+G CDTF +P LCS R+F +E W
Sbjct: 332 GISIHTFYSRVSEKSPTLLLIKNTDGDCFGCYASQPWKPCLHYYGTGECFVFTL----SP-----------------------EYHVYRWSSENHSFQLSSMDFLAIGGG---KHFAIWIDSDFVSGSSGECDTFHSPTLCSYREFTCHILEAW 455
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A1V9ZKV2_9STRA (Oxidation resistance protein 1 isoform X9 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKV2_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.360e-14 Identity = 53/162 (32.72%), Postives = 74/162 (45.68%), Query Frame = 3
Query: 6 GASYATMYNNIKQEEPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAGGKAAMDGEVVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGFTTAETE 491
GAS T+Y N+K + PT VVVE+ +G+VFGGFA+ W+ YYG G+CFL+ TP + W G N + +S+ + + MGGGG F V D GS+ TF N L + F V E+W + T+
Sbjct: 220 GASLGTLYRNVKGKRPTLVVVETGDGDVFGGFASMPWAPSQSYYGNGECFLFTC----TPTFE-----------------------HFAWKGNNAMIMFSNDSMMAMGGGG---GFAWAVNSDLSRGSSAHSLTFENRCLAHRSDFDVINFEVWELVSKYTD 351
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A7S0TEN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TEN3_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 1.370e-14 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 3
Query: 258 VVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGFTTA 482
+ Y+W+G N Y Q + + MGGGG AFGL+V DD GSTG DTF+N PLC+ F V +E WGFTTA
Sbjct: 39 IAKYEWSGANAYFQVGTESSIAMGGGG---AFGLYVDDDLSRGSTGPSDTFANLPLCTTPDFDVVNLECWGFTTA 110
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Match: A0A507EF51_9FUNG (TLDc domain-containing protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EF51_9FUNG) HSP 1 Score: 87.4 bits (215), Expect = 2.540e-14 Identity = 54/158 (34.18%), Postives = 76/158 (48.10%), Query Frame = 3
Query: 6 GASYATMYNNI--KQEEPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGGRTPCESGDASEESAADAAGGKAAMDGEVVTYQWTGMNTYLQYSDCAGLGMGGGGEEAAFGLFVGDDFLNGSTGSCDTFSNPPLCSQRQFQVSQVEIWGF 473
G S T+Y +Q + + + + G+VFG F + A+ YYGTG CFL+K++ SA D E+ Y TG N YL S+ + +GGG E FGL++ D NG +G C TF N L S +FQV +E+W F
Sbjct: 318 GISLNTLYQRCAAQQGDAALLAIRNAQGDVFGAFGSEAFRVQSGYYGTGTCFLWKVD--------------SATD----------EMKAYHATGKNDYLMLSEPHYIALGGG--EGHFGLWIDDQLYNGHSGPCQTFENERLSSTSEFQVVGLEVWSF 449 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.82.1 >prot_A-nodosum_M_contig113.82.1 ID=prot_A-nodosum_M_contig113.82.1|Name=mRNA_A-nodosum_M_contig113.82.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=177bp MYNNIKQEEPTYVVVESMNGEVFGGFAASAWSSGCQYYGTGQCFLYKIEGback to top mRNA from alignment at A-nodosum_M_contig113:711542..716046- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig113.82.1 ID=mRNA_A-nodosum_M_contig113.82.1|Name=mRNA_A-nodosum_M_contig113.82.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=4505bp|location=Sequence derived from alignment at A-nodosum_M_contig113:711542..716046- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig113:711542..716046- >mRNA_A-nodosum_M_contig113.82.1 ID=mRNA_A-nodosum_M_contig113.82.1|Name=mRNA_A-nodosum_M_contig113.82.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=531bp|location=Sequence derived from alignment at A-nodosum_M_contig113:711542..716046- (Ascophyllum nodosum dioecious)back to top |