mRNA_A-nodosum_M_contig113.8.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: D7FLH2_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH2_ECTSI) HSP 1 Score: 423 bits (1088), Expect = 7.270e-130 Identity = 250/435 (57.47%), Postives = 283/435 (65.06%), Query Frame = 1
Query: 1414 GGAKSFRRARESILLRADGMRVPEEVVSTLDEAEIE-------------VAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFT----------RVVGSASISGVGC-HSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQER---VVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIERNRRRKARRHNQGLHQARLQTLGAQKAQQQRRRWDRGERQDGVRGADSMAPEXXXXXXXXXXXXXXXXXXXXXXXXSDVAAAQRRVVPAFWQAEAYRTTYDSYMGSLLEHARQNWSR 2637
GG RRARES L G R+P +VV +L EAE+E VAADLV CD LDVTFEDIAGME +K SLQEIISEPLD P DLYPARLIKPCTG+LIYGPPGCGKTL+ARAVAKQSGAAF+SVKASTLMR R S G G HSS+MVRAVFSLA+K+QPC++F DEADGLC+KREEG+ R ++TELMQLWD LS SGQ+R VVVLAATNRPWDLDPA+QRRFSRSFQVGLPDR+MRKAVLMKALEDV+VEEGFDWRE+AV TEGYSCGDVVELCRE G L ++ E A L R++ L SDV +AQ RVVP FWQAEA+R TY+ YM SL++HAR+ WS+
Sbjct: 330 GGRSRSRRARESAL--PSGTRIPPDVVPSLSEAELETSDAGYVLQGIDKVAADLVDCDRLDVTFEDIAGMEAMKRSLQEIISEPLDLPTDLYPARLIKPCTGILIYGPPGCGKTLIARAVAKQSGAAFLSVKASTLMRTSAXXXXXXXXXXDRRSNDSPGCGGGGVGHSSVMVRAVFSLARKVQPCIVFLDEADGLCYKREEGDRAVNRGMMTELMQLWDELSCSGQDRQDRVVVLAATNRPWDLDPAVQRRFSRSFQVGLPDRKMRKAVLMKALEDVEVEEGFDWRELAVKTEGYSCGDVVELCRERDVG-LADSEEAAVAAAAPAEAAALPPVRMRPL----------------------------------------------------RMSDVTSAQARVVPVFWQAEAFRNTYEGYMCSLMDHARKKWSQ 709
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: A0A6T6CI72_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CI72_9RHOD) HSP 1 Score: 218 bits (555), Expect = 5.110e-58 Identity = 124/290 (42.76%), Postives = 171/290 (58.97%), Query Frame = 1
Query: 1414 GGAKSFRRARESILLRADGMRVPEEVVSTLDEAEIEVAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAI 2283
G K R+ E+ R + VP + L E+ V ++V +E+ V FEDI G++D+K +L+E++ P P L+ P GVL+YGPPG GKT+LA+AVAK+ A F+++ STL+ K VG S +VRAVFS A+++QPC+IF DE + L R E G ER + E +QLWDGL +S +V+L ATNRPWD+D AIQRR R+F VGLP+ Q R ++L K L+ ++ G D VA T GYS D+ ELCR A P+REA+
Sbjct: 105 GERKKTRKILEAYQERLEESGVPPMQLQGLSRFEMTVLTEVVFPEEISVGFEDIGGLDDVKEALKEVVIYPFSRPDIFMRGSLLSPPKGVLLYGPPGTGKTMLAKAVAKECNARFLTLSPSTLLSK-------------WVG-DSENLVRAVFSFAERVQPCIIFIDEVEALFQDRGEASHGVERGMKAEFLQLWDGLLTSESNSIVILGATNRPWDIDSAIQRRMPRAFLVGLPEEQQRLSILTKVLKGTPLDRGMDLAAVAQATAGYSGSDLKELCRTAALQPVREAM 380
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: UPI0005D455C9 (ATPase family AAA domain-containing protein 1-A n=1 Tax=Amborella trichopoda TaxID=13333 RepID=UPI0005D455C9) HSP 1 Score: 213 bits (541), Expect = 4.570e-57 Identity = 117/268 (43.66%), Postives = 169/268 (63.06%), Query Frame = 1
Query: 1492 VSTLDEAEIEVAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIERNR 2295
+ +++ E VA D+++ DE+ VTFE + G+E +K L E+I PL P +L+ P GVL+YGPPG GKTLLA+A+A++SG+ FI+V+ S LM K G A +V AVF+LA K+QP +IF DE D L +R E + + TE M LWDGL++ R++VLAATNRPWDLD AI RRFSR+F+VGLP+ R ++ L +V + D+ ++A++TEG+S D+ ELCR+A P+RE +E+ +
Sbjct: 59 IPSMNSYEDMVACDVINPDEIKVTFEAVGGLEKVKEDLHELIILPLQRPLLFLRGKLLAPQKGVLLYGPPGTGKTLLAKAIARESGSVFINVRVSNLMSK-----WFGDAQ---------KLVTAVFTLAYKLQPAIIFIDEVDSLLGQRRNTEQETLTNMKTEFMTLWDGLTTDRNARIMVLAATNRPWDLDEAILRRFSRAFEVGLPNASERATIMRVILNGENVADDIDYTKIALLTEGFSGSDLKELCRQAAYIPIRELLEQEK 312
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: A0A388JPE2_CHABU (AAA domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JPE2_CHABU) HSP 1 Score: 211 bits (537), Expect = 7.310e-55 Identity = 114/258 (44.19%), Postives = 163/258 (63.18%), Query Frame = 1
Query: 1522 VAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIERNR 2295
+A D+V+ D++ VTF+ I G++ +K +L E++ PL P RL++P GVL+YGPPG GKTLLA+A+AK+S A FI+V+ +TLM K G A +V AVF+LA K+QP +IF DE D +R+ E + + TE M LWDG +++ RV+VLAATNRPW+LD AI RR RSF++G+PD R ++L L+ DVE+ D +A +TEGYS D+ ELC++A P+R+ +E R
Sbjct: 148 IACDVVNPDDITVTFDSIGGLDSVKRALYELVILPLKRPELFARGRLLRPQKGVLLYGPPGTGKTLLAKAIAKESSACFINVRIATLMSK-----WFGDAQ---------KLVTAVFTLAYKLQPSIIFIDEVDSFLGQRKTSEHEAMTNMKTEFMSLWDGFTTNDSARVMVLAATNRPWELDEAILRRLPRSFEIGMPDMLQRASILKVILKGEDVEDDVDVMRLAALTEGYSGSDLQELCKQAAYAPIRDLLEEER 391
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: D8SU46_SELML (AAA domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SU46_SELML) HSP 1 Score: 204 bits (520), Expect = 3.000e-54 Identity = 114/258 (44.19%), Postives = 163/258 (63.18%), Query Frame = 1
Query: 1522 VAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIERNR 2295
+A D+++ +++DVTF+ I G+ED+K SL E++ PL P +L+ P GVL+YGPPG GKTLLA+A+AK+S A FI+V+ +TLM K G A +V AVFSLA K+QP +IF DE D +R E S + TE M LWDG ++ RV+VLAATNRPW+LD AI RR R+F+VG+PD + R ++L L+D VE+ + +A +TE YS D+ ELC++A P+R+ +E+ +
Sbjct: 68 IACDVINPEDIDVTFDSIGGLEDVKSSLFELVILPLQRPELFAHGKLLGPQKGVLLYGPPGTGKTLLAKAIAKESRAVFINVRIATLMSK-----WFGDAQ---------KLVTAVFSLAYKLQPSIIFIDEVDSFLGQRRATEHESMTHMKTEFMALWDGFTTDQSARVMVLAATNRPWELDEAILRRLPRAFEVGMPDARQRASILRVILKDEAVEDEVNIDYLASLTENYSGSDLTELCKQAAYLPIRDLLEKEK 311
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: A0A6U0DMZ0_9CHLO (Hypothetical protein n=2 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A6U0DMZ0_9CHLO) HSP 1 Score: 205 bits (521), Expect = 4.230e-54 Identity = 116/267 (43.45%), Postives = 165/267 (61.80%), Query Frame = 1
Query: 1522 VAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFD--------WREVAVMTEGYSCGDVVELCREAVRGPLREAIERNRR 2298
+AAD+ + D +DVTF I G++D K SL E++ PL P +L++P GVL+YGPPG GKTLLA+A+AK+SGA FI+V++STL K G A +V AVF+LA K+QP +IF DE D R+ E + + TE M LWDG ++ RV+VL ATNRPWD+D AI RR R+F++GLP+R+ R VL L+ ++E+GF W+ +A TEG+S D+ +LC++A GP+R+ +E R+
Sbjct: 71 IAADVANPDHIDVTFNSIGGLQDTKRSLYELVILPLVRPELFARGKLLQPAKGVLLYGPPGTGKTLLAKALAKESGACFINVRSSTLQSK-----WFGDAQ---------KLVSAVFTLAWKLQPSIIFIDEIDSFLGTRKSSEHEATSSMKTEFMTLWDGFNTDDNARVMVLGATNRPWDVDEAILRRLPRAFEIGLPNREQRAQVLAVTLKGENLEDGFSAPKEDAPLWK-IAGETEGFSGSDLRDLCKQAAYGPVRDFLENERK 322
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: UPI001929F89A (ATPase family AAA domain-containing protein 1-B-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929F89A) HSP 1 Score: 201 bits (510), Expect = 1.090e-53 Identity = 114/255 (44.71%), Postives = 158/255 (61.96%), Query Frame = 1
Query: 1522 VAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIE 2286
+A +V+ ELDV E I G+ IK L E I PL P + P GVL+YGPPG GKT+LA+A+AK+S A FI+V+ ST+M K F+ + +V A+FSLA K+QP +IF DE D +R G++G + TE M LWDG ++S RV+VLAATNRP +LD AI RRF+++F+VGLPD+ R A+L L+ VE+G D+ +A +T GYS D++ELCREA P+R+ ++
Sbjct: 2 IADGVVNVKELDVNLESIGGLGHIKKKLHETIILPLQRPEIFNDEHFLGPQKGVLLYGPPGTGKTMLAKALAKESSAVFINVRMSTVMSK-WFS-------------EAQKLVSAIFSLANKLQPAIIFIDEVDSFLGQR-AGDSGYCNSMKTEFMSLWDGFTTSKNARVLVLAATNRPTELDEAILRRFTQTFEVGLPDQNGRAAILKSILKKARVEDGIDYNHIASLTTGYSGSDLLELCREAAYYPIRDLLD 241
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: K8FEW0_9CHLO (AAA domain-containing protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8FEW0_9CHLO) HSP 1 Score: 204 bits (518), Expect = 1.330e-53 Identity = 119/275 (43.27%), Postives = 168/275 (61.09%), Query Frame = 1
Query: 1480 PEEVVSTLDEAEIEVAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWRE-------VAVMTEGYSCGDVVELCREAVRGPLREAI 2283
P+ V + ++A +AAD+ + D ++VTF I G+ED K +LQE++ PL P + L+KP GVL+YGPPG GKTLLA+A+AK+S A FI+V+ STL K G A +V AVF+LA K+QP +IF DE D R+ E + ++ TE M LWDG ++ RV+VLAATNRPWD+D AI RR RSF+VGLP+++ R +L L+ +E+GF E +A T+GYS D+ ELC++A GP+R+ +
Sbjct: 63 PKLVTNVYEDA---IAADVANPDHINVTFNSIGGLEDTKEALQELVILPLVRPELFSKSNLLKPAKGVLLYGPPGTGKTLLAKALAKESQACFINVRTSTLQSK-----WFGDAQ---------KLVTAVFTLAWKLQPSIIFIDEIDSFLGTRKNSEHEAVTQMKTEFMTLWDGFNTDSNARVMVLAATNRPWDVDEAILRRLPRSFEVGLPNKEQRAKILGVTLQHEKLEKGFFLNEMNAPIWQIAERTKGYSGSDLQELCKQAAYGPVRDLL 320
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: A0A1D1XNV5_9ARAE (ATPase family AAA domain-containing protein 1-A n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XNV5_9ARAE) HSP 1 Score: 213 bits (542), Expect = 1.600e-53 Identity = 120/275 (43.64%), Postives = 173/275 (62.91%), Query Frame = 1
Query: 1504 DEAEIEVAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPARLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREE-GEAGSEREVLTELMQLWDGLSSSGQERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAIERNRRRKARRHNQG 2325
+E E + +++ +E+ VTFEDI +EDIK SLQE++ PL P DL+ L+KPC G+L++GPPG GKT+LA+A+AK++GA+FI+V ST+ K G VRA+F+LA K+ P ++F DE D + +R GE + R++ E M WDGL + ER++VLAATNRP+DLD AI RRF R VGLP Q R+++L L VEE D++E+A+MTEGYS D+ LC A P+RE +++ R+++ R +G
Sbjct: 501 NEFEKRIRPEVIPANEIGVTFEDIGALEDIKESLQELVMLPLRRP-DLFKGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSK-------------WFG-EDEKNVRALFTLAAKVSPTIVFVDEVDSMLGQRSRAGEHEAMRKIKNEFMTHWDGLLTKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVQSRESILRTLLSKEKVEEELDYKELAMMTEGYSGSDLKNLCTTAAYRPVRELLQKERQKELERKKKG 760
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Match: A0A2V3J3F7_9FLOR (Protein MSP1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3F7_9FLOR) HSP 1 Score: 203 bits (516), Expect = 1.680e-53 Identity = 120/288 (41.67%), Postives = 179/288 (62.15%), Query Frame = 1
Query: 1432 RRARESILLRADGMRVPEEVVSTLDEAEIEVAADLVHCDELDVTFEDIAGMEDIKHSLQEIISEPLDFPPDLYPA---RLIKPCTGVLIYGPPGCGKTLLARAVAKQSGAAFISVKASTLMRKPGFTRVVGSASISGVGCHSSLMVRAVFSLAKKIQPCVIFFDEADGLCFKREEGEAGSEREVLTELMQLWDGLSSSGQ-ERVVVLAATNRPWDLDPAIQRRFSRSFQVGLPDRQMRKAVLMKALEDVDVEEGFDWREVAVMTEGYSCGDVVELCREAVRGPLREAI 2283
R+ RE++L R VP E + + AE + DLV +++ TF + G+ K +L+E+I PL +P D+Y + L++P G+L+YGPPG GKT+LA+A+AK+SGA F+++ S+L+ K +G + + RAVFSLA+++QP +IF DE DGL +R E + + + E MQLWDGL++ + +VVVL ATNRP+D+DPAI RR R F+V LP+ R +L K L V +E+ FD+ VA +T+GYS D+ ELCR A+ P+RE +
Sbjct: 57 RQRREAVLTRLLRTGVPNEALRYMSPAEELLLHDLVFPEDISATFGSVGGLNYTKETLKELIVYPLLYP-DVYQSGQSSLLQPPKGILLYGPPGTGKTMLAKALAKESGANFLALSPSSLLSK-------------WLG-DTEQLARAVFSLARRVQPTIIFIDEIDGLFRERSSNEHEAHKNLKAEFMQLWDGLTTDDRLNQVVVLGATNRPYDVDPAILRRMPRPFEVALPNEGERVEILSKVLNGVALEDDFDFHCVARVTDGYSGSDLKELCRAAMMHPIREGV 329 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig113.8.1 >prot_A-nodosum_M_contig113.8.1 ID=prot_A-nodosum_M_contig113.8.1|Name=mRNA_A-nodosum_M_contig113.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=828bp MSSTRGRQAWSTSKKLSAQNEASVSATPAPVLTAATAWRSCMRKRTTVLCback to top mRNA from alignment at A-nodosum_M_contig113:28830..36055- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig113.8.1 ID=mRNA_A-nodosum_M_contig113.8.1|Name=mRNA_A-nodosum_M_contig113.8.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=7226bp|location=Sequence derived from alignment at A-nodosum_M_contig113:28830..36055- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig113:28830..36055- >mRNA_A-nodosum_M_contig113.8.1 ID=mRNA_A-nodosum_M_contig113.8.1|Name=mRNA_A-nodosum_M_contig113.8.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=2484bp|location=Sequence derived from alignment at A-nodosum_M_contig113:28830..36055- (Ascophyllum nodosum dioecious)back to top |