prot_A-nodosum_M_contig1124.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1124.4.1
Unique Nameprot_A-nodosum_M_contig1124.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length593
Homology
BLAST of mRNA_A-nodosum_M_contig1124.4.1 vs. uniprot
Match: D7FJZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJZ1_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 2.480e-43
Identity = 191/638 (29.94%), Postives = 259/638 (40.60%), Query Frame = 0
Query:    2 ENVAYSDVAHLDVESALFAQILRAES--NTKSSESVVGRST--------EDPAIRGKR-----------------------LREIERKRRQDAKRKAKTVGAAGAHNKVRGQPASQDGQPYFTEPCKNKPCVRRNDMEEKLLARREKIKLELARKVKRFHSLQRSVIEKEKQRDATSAESKSLKDAVQIALEGMEDRQRRTQKVNEEIRQVTGELTPLEGEFRNLRKRHQEVVQQVMPLPQGLVYNNSVEWTAS--------------DGKPFTPDGLTVTFIA-VGRRXXXXXXXXXXXXXXXXXXXXXXXHHNPCLVWQPPSCFDDDPLCDEPHNARKAAWKYPSRASAGSALVR----EHPGKFGRWGTEVREQWSCCL--------------WEKEEKTNENSRRPSNGVGVAGGCEIVPPRSIPGGMTTSDDVHLVLRRP-TEITGHTGEHFGEGCAVTAGEAFETRLKTNNTGRRIERRPRESSAWSYANKQCTKAIWSPIRG--RPQTAHPKI-------GMEALTPSSKCG-DNAFYRRDR-----------------------------GDRAHNDSCRSRDFTAGYPVRLRSDSAPSKRKMSNDHLAVRRVSS-LTTLRQARAKAGWQ 532
            +++A+S VAHL V++ LFA  LRA S      ++SV+  ST        EDPA RG+R                           E      A  +   + +A  H                  PCKNK C RR  +E+KL+A+ E+IK ELA KVKR   L+RSV E+EK+RDA   E  +LK+A +    G E++++R Q    E R++  E   LE E R LR R+QE  QQ +P+P G + + +  W  +                  + PDGLTV+F    GRR                                                 R+      S  S G    +    EHPG+FGRWGTE REQWSCCL                 E+       R    VGVAGGCE VPPR  PGGMT +DDV LV            G     G      EA+ T  +  + GR + R P  +++ S        A WS IR   RPQTA+ ++       G      +S+ G  NA   R++                             G + + ++ R R  +   P         + R  +N   AV+ +SS LT LR ARA+AGWQ
Sbjct:   14 KHIAFSHVAHLGVDNVLFALRLRAGSLDPVAVNKSVLASSTSDDAEGPAEDPAARGRRNXXXXXXXXXXXXXXXXXXXXXXXXXXEDNLNTAAGLEGSAISSALGHG----------------APCKNKSCGRREALEDKLMAKWEQIKTELADKVKRAQKLRRSVEEREKKRDAAVEEITALKEAEEGEAAGAEEQKKRIQAAESEGRRILEESQRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAXXXXXXXXXXXXXYVPDGLTVSFSTNEGRR-------------------------------------------------RRTLHDEESAISGGGPTSKRPSQEHPGRFGRWGTEAREQWSCCLCGDDSGGXXXXXXXXXXEDVDGGRRGRIRGRVGVAGGCEAVPPRLGPGGMTAADDVRLVWGSGGXXXXXXCGSSGSAGAGRIRREAWGT-AQGGDDGRELWR-PMLATSVSGGGGG---AAWSLIRQHRRPQTANARLMGRKAAAGPTTAAEASRGGISNASQARNKARXXXXXXXXXXXXXXVRRECHRKCDVVYGGKHNGNNRRGRPRSCARPGSAPPAGTTTGRNHNNKQHAVKNISSSLTALRSARARAGWQ 581          
BLAST of mRNA_A-nodosum_M_contig1124.4.1 vs. uniprot
Match: A0A6H5K8Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z7_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 3.950e-33
Identity = 165/518 (31.85%), Postives = 213/518 (41.12%), Query Frame = 0
Query:   93 PCKNKPCVRRNDMEEKLLARREKIKLELARKVKRFHSLQRSV-----------IEKEKQRDATSAESKSLKDAVQIALEGMEDRQRRTQKVNEEIRQVTGELTPLEGEFRNLRKRHQEVVQQVMPLPQGLVYNNSVEWTA---------SDGK-----PFTPDGLTVTFIAVGRRXXXXXXXXXXXXXXXXXXXXXXXHHNPCLVWQPPSCFDDDPLCDEPHNARKAAWKYPSRASAGSALVREHPGKFGRWGTEVREQWSCCLWEKEEKTNENSRRPSNG--------VGVAGGCEIVPPRSIPGGMTTSDDVHLVLRRPTEITGHTGEHFGEGC-AVTAGEAFETRLKTNNTGRRIERRPRESSAWSYANKQCTKAIWSPIRG--RPQTAHPKI-GMEAL----------TPSSKCGDN-AFYRRDRGDRAHNDSC-------------RSRDFTAGYPV-------RLRSDSAPSK---------RKMSNDHLAVRRVSS-LTTLRQARAKAGWQ 532
            PC+NK C RR  +E+KL+A+ E+IK ELA KVK    L+RSV            EKEK+RDAT  E  +LK+A +    G+E                      LE E R LR R+QE  QQ +P+P G + + +  W           SD       P+ PDGLTV+F   G R                                         L DE  +A     +   R S      +EHPG+FGRWGTE RE+WSCCL                G        VGV GGCE VPPR  PGGMT +DDV LV  R  +                T  EA+    +  + GR + R P  +++ S  +     A WS IR   RPQTA+ ++ G +A           T +S+ G   A   R++  RA   +C             R RD   G          R RS + P           R  +N   AV+  SS LT LR ARA+AGWQ
Sbjct:  101 PCRNKSCGRREALEDKLMAKWEQIKTELAAKVKHAQKLRRSVSEWSRARARGGAEKEKKRDATVEEITALKEAEEGESAGVEXXXXXXXXXXXXXXXXXXXXXRLEVELRKLRVRYQEETQQKLPMPHGSIISEADAWAKAAEVAAAALSDEDEEPLPPYVPDGLTVSFSTNGGRRRRT-------------------------------------LHDE-ESAITGGGQTSKRPS------QEHPGRFGRWGTEARERWSCCLCGDXXXXXXXXXXXXXGRRGIVRGRVGVVGGCEAVPPRLGPGGMTAADDVRLVWGRGGDXXXXXXXXXXXXXXGGTRREAWGA-ARGGDDGRELWR-PMLATSVSGGSGG---AAWSLIRQHRRPQTANARLMGRKAAXXXXXXXTTATEASRGGIKYAPQARNKAQRAGGVACGGGAAASVGRECHRKRDVVYGGKHNDTNRGGRPRSSARPGSAPPAGTTPGRNHNNKQHAVKNTSSSLTALRSARARAGWQ 569          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1124.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJZ1_ECTSI2.480e-4329.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8Z7_9PHAE3.950e-3331.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1124contigA-nodosum_M_contig1124:48949..52817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1124.4.1mRNA_A-nodosum_M_contig1124.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1124 48532..53331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1124.4.1 ID=prot_A-nodosum_M_contig1124.4.1|Name=mRNA_A-nodosum_M_contig1124.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=593bp
MENVAYSDVAHLDVESALFAQILRAESNTKSSESVVGRSTEDPAIRGKRL
REIERKRRQDAKRKAKTVGAAGAHNKVRGQPASQDGQPYFTEPCKNKPCV
RRNDMEEKLLARREKIKLELARKVKRFHSLQRSVIEKEKQRDATSAESKS
LKDAVQIALEGMEDRQRRTQKVNEEIRQVTGELTPLEGEFRNLRKRHQEV
VQQVMPLPQGLVYNNSVEWTASDGKPFTPDGLTVTFIAVGRRRRQKSGKQ
EVAADSTDGGGGLSNHHNPCLVWQPPSCFDDDPLCDEPHNARKAAWKYPS
RASAGSALVREHPGKFGRWGTEVREQWSCCLWEKEEKTNENSRRPSNGVG
VAGGCEIVPPRSIPGGMTTSDDVHLVLRRPTEITGHTGEHFGEGCAVTAG
EAFETRLKTNNTGRRIERRPRESSAWSYANKQCTKAIWSPIRGRPQTAHP
KIGMEALTPSSKCGDNAFYRRDRGDRAHNDSCRSRDFTAGYPVRLRSDSA
PSKRKMSNDHLAVRRVSSLTTLRQARAKAGWQLLRIGLAPNNDYTQICAN
EKDGLVTTSAWPRQSQESLLHVGSVSVYSRAGNTGKPAGSAW*
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