mRNA_A-nodosum_M_contig112.33.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig112.33.1
Unique NamemRNA_A-nodosum_M_contig112.33.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 4.950e-64
Identity = 129/314 (41.08%), Postives = 193/314 (61.46%), Query Frame = 1
Query:   19 DTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIG-DKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPG--LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPPK---IIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            DTGA+ HM  +S+G   ++ C++ +RVA G T PI G  +V V   S   +  L L  VA+VP+L Y+L+SL+   + G +    +K+ L +    G+ +  P   N+Y+  G+R  +  E ACA IAPG    P+T VDIN +H    H+H  LLR TA+QQG  L    +L  C+GCS AKGLS  +   T  R+ KK+ RVFVD SG+  V S GG+ Y++I ++D T  + +YF++ KS++ +A +++LA+ R  G P    ++R+D+  +   G+F  +CRK  IK+EFTPA++P+ NGVAER L LI+
Sbjct:  372 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT--EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTL--VGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIK 681          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 4.990e-64
Identity = 129/314 (41.08%), Postives = 193/314 (61.46%), Query Frame = 1
Query:   19 DTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIG-DKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPG--LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPPK---IIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            DTGA+ HM  +S+G   ++ C++ +RVA G T PI G  +V V   S   +  L L  VA+VP+L Y+L+SL+   + G +    +K+ L +    G+ +  P   N+Y+  G+R  +  E ACA IAPG    P+T VDIN +H    H+H  LLR TA+QQG  L    +L  C+GCS AKGLS  +   T  R+ KK+ RVFVD SG+  V S GG+ Y++I ++D T  + +YF++ KS++ +A +++LA+ R  G P    ++R+D+  +   G+F  +CRK  IK+EFTPA++P+ NGVAER L LI+
Sbjct:  385 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT--EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTL--VGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIK 694          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 5.030e-64
Identity = 129/314 (41.08%), Postives = 193/314 (61.46%), Query Frame = 1
Query:   19 DTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIG-DKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPG--LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPPK---IIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            DTGA+ HM  +S+G   ++ C++ +RVA G T PI G  +V V   S   +  L L  VA+VP+L Y+L+SL+   + G +    +K+ L +    G+ +  P   N+Y+  G+R  +  E ACA IAPG    P+T VDIN +H    H+H  LLR TA+QQG  L    +L  C+GCS AKGLS  +   T  R+ KK+ RVFVD SG+  V S GG+ Y++I ++D T  + +YF++ KS++ +A +++LA+ R  G P    ++R+D+  +   G+F  +CRK  IK+EFTPA++P+ NGVAER L LI+
Sbjct:  528 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHT--EHACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTL--VGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIK 837          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 2.350e-63
Identity = 127/312 (40.71%), Postives = 189/312 (60.58%), Query Frame = 1
Query:   19 DTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIGDKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACA-VIAPG-LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPP---KIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLI 939
            D+GA+  M  S++G  N+Q CN+ ++   G  + I G  +V V  QS  + V + +   A+VP +  +L+SL+   E+GH Y G   GL +  K+GK++  P +  +   +GY+ E +V+ ACA +I PG     T  D+N +H +  H H RLLR TA+QQGV+L     LL C GCS AKG    + + T+ R+ KK+ RVF+D  G     S GGR Y++I R DAT  + ++F+++KSE+ DAL+QF+AD R  G P    ++R+D+  Q   G+F + CRK  IK+E TP +TP+ NGVAER L +I
Sbjct:  562 DSGATCSMFRSADGFKNYQECNRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGEAKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGP-LLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDNEFQ---GQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGII 869          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.370e-57
Identity = 119/320 (37.19%), Postives = 181/320 (56.56%), Query Frame = 1
Query:    1 MEGWCFDTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVE-QGHKYIGDKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESD-VEQACAVIAPGLLP-TTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPP---KIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            +E W  DTG + HM+     M + +PC+K+++   GVT  IE    + + + +      ++L  V Y P L Y+L S S   + +   Y+G  +G  +M      +   N+  M ++  YR E++ V    A + P      + +D+N +H   AH+H  LLR TA++ G++L  K  +  C GCS +K     +   T+CRSDKK+GRVFVD  G K VAS GG+ Y +I ++D T  +W+YF++ KS++  A   FLA  R  G P   +I+R+D+  +   G+F  +C +L IK+EFTPA +PQ NGVAERGL LIE
Sbjct:  428 VEDWYADTGTAFHMTDRLSCMKDLKPCHKNVKGIGGVTCEIEFSGTLELVFVTADSQFPVELENVLYSPNLGYNLFSPSAEFDGESWNYLGGPDG--VMTAFNGHVTFQNLDGMLISPAYRLENNCVGSVLAALTPSNPKHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGK--MHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIE 743          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 9.880e-57
Identity = 120/314 (38.22%), Postives = 187/314 (59.55%), Query Frame = 1
Query:   19 DTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIG-DKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPGLLPTTG--VDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPPK---IIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            DTGA+ HM  +S+G   ++ C++ +RVA G T PI G  +V V   S   +  L L  VA+VP+L Y+L+SL+   + G +    +K+ L +    G+ + +P   N+Y+  G R  +  E A   IAPG    +   V+IN +H    H+H  LLR TA+QQG  L    +L  C+GCS AKGLS  +   T  R+ K++ RVF+D SG+  V S  G+ Y++I ++  T  + +YF++ KS++ +A +++LA+ R  G P    ++R+D+  +   G+F  +CRK  IK+EFTPA++P+ NGVAER L LI+
Sbjct:  398 DTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHT--EHAYTAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTL--VGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIK 707          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5KUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV5_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.620e-55
Identity = 119/307 (38.76%), Postives = 182/307 (59.28%), Query Frame = 1
Query:   40 MSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIG-DKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPG--LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPPK---IIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIE 942
            M  +S+G   ++ C++ +RVA G T PI G  +V V   S   +  L L  VA+VP+L Y+L+SL+   + G +     K+ L +    G+ +  P   N+Y+  G R  +  E A   IAPG    P+T VDIN +H    H+H  LLR TA+QQG  L    +LL C+GCS AKGLS  +   T  R+ K + RVFVD SG+    S GG+ Y++I ++D T  + +YF++ KS++ +A +++LA+ R  G P    ++R+D+  +   G+F  +CRK  IK+EF+PA++P+ NGVA+R L LI+
Sbjct:    1 MFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFETKTLKKHDLELERVGGESVHFPRCGNLYVRNGSRTHN--EHASPTIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTML--VGELLECLGCSTAKGLSTPIPNKTSTRAAK-LQRVFVDLSGKTRAQSLGGKWYTLIVKDDFTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMVVRSDNGGEFFYGEFGRVCRKYCIKQEFSPAHSPEYNGVADRALDLIK 302          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.420e-54
Identity = 123/316 (38.92%), Postives = 181/316 (57.28%), Query Frame = 1
Query:   13 CFDTGASGHMSPSSEGM-TNFQP-CNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIGDKNGLTIMLKSGKQLLAPNVRNMYLTYGYRPESDVEQACA-VIAPG-LLPTTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPP---KIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLI 939
            CF  G  GH S   E   +++ P C   L   +      + KC       + + SV + L  + +VP +  +L+SL+   E+GH Y G   GL +  K+GK++  P +  +   +GY+ E +V+ ACA +I PG     T  D+N +H +  H H RLLR TA+QQGV+L     LL C GCS AKG    + + T+ R+ KK+ RVF+D  G     S GGR Y++I R DAT  + ++F+++KSE+ DAL+QF+AD R  G P    ++R+D+  Q   G+F + CRK  IK+E TP +TP+ NGVAER L +I
Sbjct:   83 CFTCGLKGHKSFQCETKESDYNPQCEHCLGWGHK-----KEKCPTEAAVLAEVASVVVPL--IXHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGEAKAATPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGP-LLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLKRKSEAADALEQFIADYRSEGTPCEVYVVRSDNEFQ---GQFSKTCRKWGIKQEKTPPHTPKYNGVAERWLGII 387          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.980e-54
Identity = 119/321 (37.07%), Postives = 178/321 (55.45%), Query Frame = 1
Query:    1 MEGWCFDTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVE-QGHKYIGDKNGLTIMLKSGKQLLAPNVRNMYLTYGYR-PESDVEQACAVIAPGLLP-TTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPP---KIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIEK 945
            +E W  DTG + HM+ S   M + +PC+KS+    GV+  I     + + + +      ++L  V Y P L Y+L S S   + +    +G  +G+    K   Q+   N   M +   YR  E+ V    A + P      T +D+N +H   AH+H  LLR TA++ G +L    ++  C GCS AK +   + + T+ RSDKK+GRVFVD  G K VAS GG+ Y +I ++D T  +W+YF++ KS++  A   FLA  R  G P   +I+R+D+  +   G+F  +C +L IK+EFTPA +PQ NGVAERGL LIE+
Sbjct:  522 VEDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSMELKNVLYSPNLGYNLFSPSAEFDGESWNGLGGPDGVMTAFKG--QVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTEL--VGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEE 838          
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 201 bits (510), Expect = 2.740e-54
Identity = 119/321 (37.07%), Postives = 178/321 (55.45%), Query Frame = 1
Query:    1 MEGWCFDTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVEYQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVE-QGHKYIGDKNGLTIMLKSGKQLLAPNVRNMYLTYGYR-PESDVEQACAVIAPGLLP-TTGVDINHYHRTTAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRSDKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPDALDQFLADTREYGPP---KIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTPQLNGVAERGLTLIEK 945
            +E W  DTG + HM+ S   M + +PC+KS+    GV+  I     + + + +      ++L  V Y P L Y+L S S   + +    +G  +G+    K   Q+   N   M +   YR  E+ V    A + P      T +D+N +H   AH+H  LLR TA++ G +L    ++  C GCS AK +   + + T+ RSDKK+GRVFVD  G K VAS GG+ Y +I ++D T  +W+YF++ KS++  A   FLA  R  G P   +I+R+D+  +   G+F  +C +L IK+EFTPA +PQ NGVAERGL LIE+
Sbjct:  229 VEDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFSPSAEFDGESWNGLGGPDGVMTAFKG--QVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTEL--VGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEE 545          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig112.33.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE4.950e-6441.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE4.990e-6441.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.030e-6441.08Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5L175_9PHAE2.350e-6340.71Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE1.370e-5737.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF7_9PHAE9.880e-5738.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KUV5_9PHAE2.620e-5538.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE1.420e-5438.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE1.980e-5437.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE2.740e-5437.07Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig112contigA-nodosum_M_contig112:258917..259864 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog7260.FBpp0244144
PFAMsDUF4219,MBD,RVT_2,Retrotran_gag_2,gag_pre-integrs,rve,zf-CCHC
Model size948
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.66e-23
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,38DPC@33154|Opisthokonta,3BI7U@33208|Metazoa,3CTS1@33213|Bilateria,41WYJ@6656|Arthropoda,3SH01@50557|Insecta,457GT@7147|Diptera,45YIF@7214|Drosophilidae
DescriptionPfam:UBN2_2
Cds size948
COG categoryL
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866519.3853498-CDS-A-nodosum_M_contig112:258916..2598641680866519.3853498-CDS-A-nodosum_M_contig112:258916..259864Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig112 258917..259864 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig112.33.1prot_A-nodosum_M_contig112.33.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig112 258917..259864 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig112.33.1

>prot_A-nodosum_M_contig112.33.1 ID=prot_A-nodosum_M_contig112.33.1|Name=mRNA_A-nodosum_M_contig112.33.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=316bp
MEGWCFDTGASGHMSPSSEGMTNFQPCNKSLRVANGVTIPIEGKCNVVVE
YQSGLESVRLQLHEVAYVPKLRYHLLSLSKAVEQGHKYIGDKNGLTIMLK
SGKQLLAPNVRNMYLTYGYRPESDVEQACAVIAPGLLPTTGVDINHYHRT
TAHTHSRLLRATAEQQGVKLDPKTKLLPCVGCSAAKGLSARLNKTTECRS
DKKMGRVFVDESGEKPVASKGGRKYSIIFREDATTMSWIYFMRKKSESPD
ALDQFLADTREYGPPKIIRTDDAPQLKAGKFEEICRKLHIKREFTPANTP
QLNGVAERGLTLIEKV
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mRNA from alignment at A-nodosum_M_contig112:258917..259864-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig112.33.1 ID=mRNA_A-nodosum_M_contig112.33.1|Name=mRNA_A-nodosum_M_contig112.33.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=948bp|location=Sequence derived from alignment at A-nodosum_M_contig112:258917..259864- (Ascophyllum nodosum dioecious)
ATGGAAGGCTGGTGCTTCGATACCGGGGCCTCTGGCCATATGTCACCTAG CTCAGAAGGAATGACAAACTTCCAGCCATGCAACAAATCATTGCGAGTTG CGAATGGCGTCACCATTCCGATTGAAGGCAAATGCAATGTAGTTGTCGAG TATCAATCTGGCCTGGAATCTGTACGCTTGCAACTACATGAAGTAGCATA CGTGCCGAAACTAAGGTACCACTTACTATCGCTCTCAAAGGCCGTTGAGC AAGGCCACAAATACATCGGTGACAAGAACGGGCTCACCATAATGTTGAAA TCTGGCAAGCAATTGCTAGCACCAAACGTAAGGAATATGTACCTCACCTA TGGTTACAGACCCGAGAGTGATGTAGAACAAGCCTGCGCCGTGATTGCCC CCGGGCTTCTGCCTACTACCGGTGTGGATATTAATCACTACCATCGTACA ACCGCCCACACACACTCTCGTTTACTGAGGGCGACCGCGGAGCAGCAGGG AGTAAAGCTGGATCCGAAGACCAAGCTACTCCCATGCGTTGGGTGTTCCG CGGCAAAGGGGCTTAGTGCTCGCTTGAACAAGACCACCGAATGCCGATCA GATAAGAAGATGGGCAGGGTTTTTGTAGACGAAAGTGGCGAGAAGCCAGT AGCGTCTAAAGGTGGCAGAAAATACTCGATTATTTTTCGAGAAGATGCGA CGACAATGTCGTGGATATACTTCATGAGAAAGAAGTCTGAATCTCCGGAT GCGCTGGACCAATTCTTGGCTGACACTAGAGAATACGGACCTCCCAAAAT CATTCGCACTGATGACGCGCCCCAGTTGAAGGCAGGCAAATTTGAGGAGA TCTGTAGGAAGCTACACATCAAAAGAGAATTTACTCCCGCGAATACGCCG CAGCTGAACGGAGTAGCAGAACGTGGTCTAACGCTCATCGAGAAAGTA
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Coding sequence (CDS) from alignment at A-nodosum_M_contig112:258917..259864-

>mRNA_A-nodosum_M_contig112.33.1 ID=mRNA_A-nodosum_M_contig112.33.1|Name=mRNA_A-nodosum_M_contig112.33.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=948bp|location=Sequence derived from alignment at A-nodosum_M_contig112:258917..259864- (Ascophyllum nodosum dioecious)
ATGGAAGGCTGGTGCTTCGATACCGGGGCCTCTGGCCATATGTCACCTAG
CTCAGAAGGAATGACAAACTTCCAGCCATGCAACAAATCATTGCGAGTTG
CGAATGGCGTCACCATTCCGATTGAAGGCAAATGCAATGTAGTTGTCGAG
TATCAATCTGGCCTGGAATCTGTACGCTTGCAACTACATGAAGTAGCATA
CGTGCCGAAACTAAGGTACCACTTACTATCGCTCTCAAAGGCCGTTGAGC
AAGGCCACAAATACATCGGTGACAAGAACGGGCTCACCATAATGTTGAAA
TCTGGCAAGCAATTGCTAGCACCAAACGTAAGGAATATGTACCTCACCTA
TGGTTACAGACCCGAGAGTGATGTAGAACAAGCCTGCGCCGTGATTGCCC
CCGGGCTTCTGCCTACTACCGGTGTGGATATTAATCACTACCATCGTACA
ACCGCCCACACACACTCTCGTTTACTGAGGGCGACCGCGGAGCAGCAGGG
AGTAAAGCTGGATCCGAAGACCAAGCTACTCCCATGCGTTGGGTGTTCCG
CGGCAAAGGGGCTTAGTGCTCGCTTGAACAAGACCACCGAATGCCGATCA
GATAAGAAGATGGGCAGGGTTTTTGTAGACGAAAGTGGCGAGAAGCCAGT
AGCGTCTAAAGGTGGCAGAAAATACTCGATTATTTTTCGAGAAGATGCGA
CGACAATGTCGTGGATATACTTCATGAGAAAGAAGTCTGAATCTCCGGAT
GCGCTGGACCAATTCTTGGCTGACACTAGAGAATACGGACCTCCCAAAAT
CATTCGCACTGATGACGCGCCCCAGTTGAAGGCAGGCAAATTTGAGGAGA
TCTGTAGGAAGCTACACATCAAAAGAGAATTTACTCCCGCGAATACGCCG
CAGCTGAACGGAGTAGCAGAACGTGGTCTAACGCTCATCGAGAAAGTA
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