mRNA_A-nodosum_M_contig1101.8.2 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 281 bits (720), Expect = 1.310e-76 Identity = 235/703 (33.43%), Postives = 341/703 (48.51%), Query Frame = 1
Query: 97 GFGDVPDARHVLGLVTRLDRHRLSLGNNPWERPPAPVVNKGIGPIKKYY---DELEKAGSVL--VDSLKVVFIGHSGAGKTSLIKSIKAGEGRLAHGE--ELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFL---DQHKVLSENLNDWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDE----ELQLMSGIQLVSSSPTLRYSDSGLPDLREKL-QSCGTGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLP-PLQSAGKC-----TWIARNELSRHWKTVQDCSFLPAYLKADDP-------EFALKSVLDLRESGGSLLQHP--EVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEKP-------DEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPS-ADVE--EKFLVLMRLPLEASPETMSRFEAFSELQKDWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHRQLPHYLAGVKDIQGRSPGDPILP 2085
G G+ DA L LV RL L L NPW PP VV G+ +K+Y E +KAG+ + + LKVV +G + AGKTSL+ SI AG G G + +VG+ + Q + T V+ +D AGQVDY G+HQ FLT RALY+LV D +K+ D K + +++ WL L+LRAP STV+L D ++K F E + ++ V++ W E R G R R + +L L+ G+ VS SGLP L + + T I +P +W LALEV+ A+R +P+ AR + GLP PL + G +I+++ELSR W++V D L+ D P E AL+ L + + G L+ + +FLDV + L+PIL+HK + + E +W L R+ L GIL FA +W + E + F VL+KLG+ LP+ G R + + S P + +DV LV+MRL + + F+ + V +KWEFD P+GL+ERL+ASCH +G V CWR GA F S++ G L T ++ + FG +S VW A+R+V S+ L KE+PG+ W W++C H Y+A ++ R GDP+LP
Sbjct: 8 GLGETEDA---LRLVERLG-DSLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQD-----TKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDDLDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCD-----GSIDK----------FAETAERIQRRVRELVAVWHEAR--GLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIH--VPPAWDLALEVIGALRASCNPIAAARDKL---GLPNPLPADGVADVHAFAFISKDELSRKWRSVVD------NLRDDVPAAMISNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQP-----------FENRW-LWMRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPM-----GRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRDRVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVE-GRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMAS--SVEARV-GDPLLP 652
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 282 bits (722), Expect = 6.870e-75 Identity = 235/695 (33.81%), Postives = 332/695 (47.77%), Query Frame = 1
Query: 100 FGDVPDARHVLGLVTRLDR----HRLSLGNNPWERPPAPVVNKGIGPIKKYYD---ELEKAGSVL--VDSLKVVFIGHSGAGKTSLIKSI--KAGEGRLAHGEELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFL-----DQHKVLSENLNDWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVSSSPTLRYSDSGLPDLREKLQSCG-TGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTWIARNELSRHW----KTVQDCSFLPAYLKA-DDPEFALKSVLDLRESGGSLLQ--HPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWE-----KPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRF-EAFSELQKDWG---VVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGG-TLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHRQLPHYLAGVKDIQGRSPGDPIL 2082
F + A L V RL + L L +NPW PP +VN+G+ ++KY E E+AG+ + ++ LKVV IG GAGKTSL+ SI + G + EE+ +VG+ + H GR V+ YD AGQVDYYG+HQ FLT RALY+LV D S+ D KV+SE++ WL LHLR P S VLL D L F VE S +++ QEW+ NR+ + L ++ LVS GL ++ ++ + G T I +P SW LAL LDA+RD DP RRF++ + + +A +++ + L + W K+V PA A D A++ L + E G +L+ H +V+FLDV + +L PIL+HK + +H F +L A ++ LV+ G+L FA++LW+ P E + + VL LG+ LPL R+E R S + + LV+MRLP E +L + G V +KW FD HGLVER++ASCH +G+V CWR GA F S ++ GG L + E +G L V FG +W ALR+V SS +PG+ WE C H + Y I+ R GDPIL
Sbjct: 315 FSALGQAEQALQFVARLGQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRI----VEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSLQ---------------EFVGTAGAVESSARRQLQEWQGNRKSPGVTK---LTILQQPSLVSCD-----DGGGLSEVIARVDAQGATSIV--VPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLE------SHFFPRSELT-----AMKDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREE---RHTASAIDPAAAHGQIGRQDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARA--DDGGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFK--TPIEARI-GDPIL 961
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 277 bits (708), Expect = 5.770e-74 Identity = 243/808 (30.07%), Postives = 358/808 (44.31%), Query Frame = 1
Query: 13 NKLSGSIPSELGKLSALQSLDLGYNQLSGFGD---------------------------------------------VPDARHVLGLVTRLDRHRLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSV-----LVDSLKVVFIGHSGAGKTSLIKSIKAGEGRLAHGE--ELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLV-----CDASKFLDQHKVLSENLNDWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVSSSPTLRYSDSGLPDLREKLQSCGTGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPL---QSAGKCTWIARNELSRHWKTVQDCSFLPAYLKAD-------DPEFALKSVLDLRESGGSLLQ--HPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEV-LPNQTFD----VLVKLGILLPLPRDE--PGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQK--DWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPY-HRQLPHYLAGVKDIQGRSPGDPILPPHFR--VHYGC-------SRARDVASRLGKVLRARKGP 2172
N ++G IP LG+L AL+ L+L YN+ V +A H L +TR + LG NPW PP VV KG+ ++ Y ++ KA + LKVV +G S AGKTSL+ SI G G G E+ +VG+ + H + T V+ YD AGQVDYYG+HQ FLT RALY+LV C D +V+ +++ WL LHLRAP STV+L D + F VEE V +EW++ R D ++ ++ LVS GL ++ +++ + + +P +W LAL LDA+RD DP + R ++ P + + G+ ++ N L WK V + L++D DP+ A++ L + E G +L+ + + VFLDV + +L PIL+HK K +F Q R LV+ GIL +FA+ LW E+ +P + D V+V LG+ LPL PG+ + G ++ + LV+MRLP E + ++++ D V + W FDS P+GLVER++ASCH++G V CWR GA F S + + +S V + L +R FG + VW ALR+V SS + K++PG+ WE W +C HR ++ K S GD +L GC + R V RLGKV+ + P
Sbjct: 84 NNVTGGIPRGLGRLGALEVLNLSYNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGEAEHALRWLTRRSECLIVLGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQG-----TAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSIE---------------DFTGTAAVVEERVAVLRKEWRKARGFSSTRMDMDMTVLERSSLVSC-----LDGVGLQEMIDRI-AAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREPGR-SFFTENSLVEQWKGV--VQNVEGELRSDAEKMAVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHK------VF------PQHFAGMRNELVHNGILRIAFAEHLWSDVMEITVPEEVLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNIS-----RQDMLVIMRLPETCGAEHELQELISDQMRRHSDREVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSDRLYTFVVRYDSAVGNER-RILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDK----ASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQAPP 840
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 206 bits (525), Expect = 3.030e-50 Identity = 207/698 (29.66%), Postives = 295/698 (42.26%), Query Frame = 1
Query: 121 RHVLGLVTRLDRHRLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDS--LKVVFIGHSGAGKTSLIKSIKAGEGRLAHGEELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKF--------------LDQHKVLSENLNDWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVSSSPTLRYSDSGL---------------------------PDLREKLQ--SCGT--GIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPP---------LQSAGKCTWIARNELSRHWKTVQDCSFLPAYLKADD-----PEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFG--GRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQKDWGVV--VKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHRQ 2019
+ + L+ L R + NPW+ PP VV+KGI +++Y+ +L G V +KVV +G GAGKTSL +S++ G G E +V + VE Q + +++YD AGQV Y GL Q+FL+ RA+ +LVCD F D K+ + DWL +L R P S V++ T D L AG+ D ++ EW E+ N + + G+ L S P D G P L ++ S G G +P SW +ALEVLDA+ +PVE+A++ V G P Q + R +LS W V A L+ D P+ AL+ L +RE GSL++H VFLDV A L P+LNH+ + RG G G L+E +A L G+L S A+ LW PD L N L LG+ PL D+P E +VL+RL E PE + + + ++D V VKW+ G P G +E+++ C +G + T WR G V A TFAL + + E + ++ +G + A W AL F IS + EFPGL W A ++CP H Q
Sbjct: 229 KQLEALLATLSRLGFLVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVE--QMDVNGVT---LRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCD----------LAAGMGT---------DAAGRIEGAIGEWLESWSGAGMNA---VHVEDGVSLTSCFPPTPNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVV------AALEGDGVSVVKPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLW--PDG-LSNYVLPALDSLGLTYPLD-DDPA-------------------EGLVVLLRLD-EKRPEDVGK--ELDDFRRDHTAVLSVKWKVFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGIAARTFALVVEYSHDKCE------VDMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQ 857
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 204 bits (520), Expect = 1.110e-49 Identity = 205/686 (29.88%), Postives = 298/686 (43.44%), Query Frame = 1
Query: 121 RHVLGLVTRLDRHRLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDS--LKVVFIGHSGAGKTSLIKSIKAGEGRLAHGEELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKF------LDQHKVLSENLN--------DWLATLHLRAPLSTVLLCGTHKDKC--LPVNLVEKLLAG----LKQCPSFEEILKDVEESVKKKHQEWKENRREG-----FRNRDEELQLM----SGIQLVSSSPTL----RYSDSGLPDLREKLQSCGTGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPP---------LQSAGKCTWIARNELSRHWKTVQDCSFLPAYLKAD-----DPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFG--GRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQKDWGVV--VKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHRQ 2019
+ + L+ L + L + NPW+ PP VV+KGI +++Y+ +L G V +KV+ +G GAGKTSL +S++ G G E +V + VE Q + +++YD AGQV Y GL Q+FL+ RA+ +LVCD F L L ++LN DWL +L R P S V++ T D + + ++ G ++ + VE+ V +G R EE S V S P+L Y++ G +LR G +P SW + L VLDA+ DPVE+A++ V G P Q + R +LS W V A L+ D +P+ AL+ L +RE GSL++H VFLDV A L P+LNH+ + RG G G L+E +A L G+L A LW PD L N L LG+ PL D+P E +VL+RL E PE + + + ++D V VKW+ G P G +E+++ C +G + T WR G V A TFAL + + T E + + +G + A W AL + IS + EFPGL W A ++CP H Q
Sbjct: 193 KQLEALLATLSQLGLHVHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVE--QMDVNGVT---LRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGMAADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSCFASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKG--ELR--------GASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVV------AALEEDGVSIVNPDHALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLW--PDG-LSNYVLPTLDSLGLTYPLD-DDPA-------------------EGLVVLLRLD-EKRPEDVGK--ELDDFRRDHTAVLSVKWKIFLG-VPPGAIEKMLTRCCRLGTL--RTFWRFGV-LVQGSLGGGMAAKTFALLIEYSHDTCE------VDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQ 821
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 191 bits (485), Expect = 8.070e-46 Identity = 215/757 (28.40%), Postives = 315/757 (41.61%), Query Frame = 1
Query: 13 NKLSGSIPSELGKLSALQSLDLGYNQLSGFGD----VPDARHVLG---------------LVTRLDR------HRLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDSL-KVVFIGHSGAGKTSLIKSIKAGEGR-LAHGEELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFLDQHKVLSEN-------------LNDWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVS----------SSPTLRYSDSG--------------LPDLREKL--QSCGTGIRWW---IPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTWIARNELSRHWK-TVQDCSFL---------PAYLKADDPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQK--------DGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEK--PDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQKDWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIK-SAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYH 2013
N + G+IP ELG+L AL+ LDL +N+LS D D H G L+ LD L LG NPW PP P+V KG ++ Y+++L + S+ KVV +G GAGKTSL +S+KA E +E +V VE + E + V++YD AGQV Y GL Q+FLT RA+ VLVC+A KF Q + S + + DWL ++ R P + V+L T D LAG + +I +E + ++ W RN + ++L + L S S T + G P L +L + G G+R +P SW +AL VL+A+ DPVE R P G T AR E + + TV+D S + + + + AL+ L +RE GSL+++ + +FLDV A L P+LNHK Q+ D A I L++ +A L +QG+L A +W + VLP F LG+ PL D+P + +VL+RL + + F L + W+ G P G +E+++ C +G V T WR G + G FA+ L + T L + FG + A W L +V+S+ + +FPGL W + CP H
Sbjct: 78 NNVIGAIPRELGRLGALEKLDLAHNKLSALWDHTQNAEDIGHDEGTQRMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEG-----SSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCD-----------LAG----GNAGKIGARMEHACRRWLSSW-------VRNGLQPVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVVLR------KSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERSGVTVTNAKNALEGALLIREFDGSLIRYEKFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARIT----LDDPSDIASWGRLKSQGVLEPRLAYAIWPNGLSEYVLPALAF-----LGLTFPL-EDDPA-------------------KGLVVLLRLKPDRPESVGHAIDTFC-LDHTPALSASWKIFLG-VPPGAIEKVLTRCCGLGGV--RTFWRYGVLVHGGLGEVHVGRRGIFAVVLEY------SSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQH 762
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 183 bits (464), Expect = 5.750e-43 Identity = 193/673 (28.68%), Postives = 282/673 (41.90%), Query Frame = 1
Query: 76 LGYNQLSGFGDVPDARHVLGLVTRLDRH----RLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDS-LKVVFIGHSGAGKTSLIKSIKAGEGRLAHGEELES-VGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFLDQHKVLSENLN--DWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVS--------SSPTLRYS-----DSGLPDLREKL----QSCGTGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTWIARNELSRHWKTVQDCSFLPAYLKADDPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQK-DWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHR 2016
LG +Q P V L LDR L L NPWE PP +V G+ ++ YYD + K G+ V LKVV IG GKTSL +SI G + +ES V V VE+H+ + ++++D AGQV YYGL QLFLT RA+Y+LV DA+K + + E+L WL L R P + V+L G D+ + + DVE ++ + W E ++ L L G+ LVS S+P D P L ++ + +P S+RLALE+L+ + ++RR ++ + I R +L W + A PE A+ + +R+ G L+++ VFLDVE FA L P+ +H+ +D G GG ++ LA L N+ + A+ LW E+ P+ L G+ PLP D G ++L+R+ PE + E + + D + V F G P G VERL+A C +G WR GA V N + G F+L++ + E L + FG E W AL V+S ++ EFPGL E CP H+
Sbjct: 469 LGQDQTGSMAARPGTLPV-DLARLLDRFDGLVTLDLSRNPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGT---------------VADDVECESRRWLKSWMEK---AHGHQPHGLSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR----------KAEQRTRGITRADLEEKWH-AKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHR---RDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWT--PELAPHLLL-ALKSAGLTFPLPNDPNGG--------------------LVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPP-GFVERLLARCCHMGYPFP--FWRYGALIVGNG----AEKGLFSLSVEYSEEDK------ILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHK 1058
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 182 bits (462), Expect = 8.530e-43 Identity = 186/640 (29.06%), Postives = 273/640 (42.66%), Query Frame = 1
Query: 163 LSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDS-LKVVFIGHSGAGKTSLIKSIKAGEGRLAHGEELES-VGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFLDQHKVLSENLN--DWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVS--------SSPTLRYS-----DSGLPDLREKL----QSCGTGIRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTWIARNELSRHWKTVQDCSFLPAYLKADDPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQK-DWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHR 2016
L L NPWE PP +V G+ ++ YY+ + K G+ V LKVV IG GKTSL +SI G + +ES V V VE+H+ + ++++D AGQV YYGL QLFLT RA+Y+LV DA+K + + E+L WL L R P + V+L G D+ + + DVE ++ + W E ++ L L G+ LVS S+P D P L ++ + +P S+RLALE+L+ + ++RR ++ + I R +L W + A PE A+ + +R+ G L+++ VFLDVE FA L P+ +H+ +D G GG ++ LA L N+ + A+ LW E+ P+ L G+ PLP D G ++L+R+ PE R E ++ +K D + V F G P G VERL+A C +G WR GA V N + G F+L+L + E L V G E W AL V+S ++ EFPGL E CP H+
Sbjct: 408 LDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGH-----PIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMDGLNLEDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGT---------------VADDVECESRRWLKSWMEK---AHGHQPHGLSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEEL------ASSSRR----------KAEQRTRGITRADLEEKWH-AKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHR---RDSYGDIDLGGIRVTN---LASLRRLDNEHVFEPQLAEELWT--PELAPHLLL-ALKSAGLTFPLPNDPNGG--------------------LVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPP-GFVERLLARCCHLGYPYP--FWRYGALIVGNG----AEKGLFSLSLDYSEHD------NMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHK 965
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FUD0_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD0_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.330e-40 Identity = 190/690 (27.54%), Postives = 289/690 (41.88%), Query Frame = 1
Query: 121 RHVLGLVTRLDRHR----LSLGNNPWERPPAPVVNKGIGPIKKYYDEL-EKAGSVLVDSLKVVFIGHSGAGKTSLIKSIKAGEGR-LAHGEELESVGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFLDQH--------------KVLSENLNDWLATLHLRAPLSTVLLCGTHKDKC--------LPVNLVEKL-LAG----------------LKQCPSFEEILKDVEESVKKKHQE--WKENRREGFRNRDEELQLMSGIQLVSSSPTLRYSDSGLPDLREKLQSCGTGIR---WWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTW-----IARNELSRHWKTVQDCSFLPAYLKADDPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHI--FGGRK--LEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQKDWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYH 2013
R + L+ LDR L+L +NPW PP +V KG I+ Y+++L + V S+K++ +G GAGKTSL KS+KA E +E +V VE + E + +++YD AGQV Y GL Q+FLT RA+ V+VC+A F Q K+ + DWL ++ R P + V+L T D + L ++ LA L C + + +D E S + + E W + R+G +D+ + SP+L + PD G G+R IP SW +AL VL+A+ DPVE + C I +L W+ + + + AL+ L +RE GSL++H VFLDV A L P+LNHK ++ ++ G + LE+ +A L N+G+L A+ LW L + LG+ PL D G +VL+RL + PE + + L + + W+ G P G +E+++ C S+G V T WR G V + G FA+ L + S E L + FG + A W AL +V+S+ + +FPGL ++CP H
Sbjct: 278 RQLCRLLDVLDRAEREVDLNLDDNPWAEPPESIVAKGAKNIRGYFEDLYAEPCRVQRSSVKIILVGQEGAGKTSLRKSMKAKEATPTGEWKEESTVFADVERMELEG-----SSIRVYDCAGQVAYTGLLQMFLTPRAVCVIVCNAESFGQQRGTCETGGQVKEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDSVGGNAGEIGKRIELASRMWLASWVRSGMQPVRLEPGVCLTSCCTTN-VCEDGERSTRNQAMEGGWTCDWRDG---KDD-----------NPSPSLLHRLVNKPD--------GGGLRGAQMVIPRSWDIALTVLEALERGRDPVEMVVEDLGDADGGDATGTAACKTGLYHGITAEDLRTKWQEAA-VGLAGRDITVTNADNALEGALAIREFDGSLVRHETFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPSDIASWGRLKNEGVLEPRLARKLWPNG---LSEYVIPTIASLGLTFPLENDPAGG--------------------LVVLLRLEHDR-PELVGKVIDTFCLDQTPALRASWKIFLG-VPAGAIEKVLTRCCSLGGV--QTFWRSGV-LVHGGVGEQDRSGIFAVVLEYSPSDNE------LTAQIFGDISTPAPWVALSYVVSAVSLMLLDFPGLRSRGSLKCPQH 904
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 171 bits (433), Expect = 2.150e-39 Identity = 187/650 (28.77%), Postives = 282/650 (43.38%), Query Frame = 1
Query: 136 LVTRLDR-HRLSLGNNPWERPPAPVVNKGIGPIKKYYDELEKAGSVLVDS-LKVVFIGHSGAGKTSLIKSIKAGEGRLAHGEELES-VGVSVENHQFETGRAARTDVKLYDLAGQVDYYGLHQLFLTERALYVLVCDASKFLDQHKVLSENLN--DWLATLHLRAPLSTVLLCGTHKDKCLPVNLVEKLLAGLKQCPSFEEILKDVEESVKKKHQEWKENRREGFRNRDEELQLMSGIQLVSSS--------PTL-RYS----DSGLPDLREKLQSCGTG----IRWWIPLSWRLALEVLDAVRDKIDPVETARRFVNPEGLPPLQSAGKCTWIARNELSRHWKTVQDCSFLPAYLKADDPEFALKSVLDLRESGGSLLQHPEVVFLDVEDFALSLAPILNHKTQQKDGRGAHIFGGRKLEEQWQLAGRELLVNQGILLASFAQFLWEKPDEVLPNQTFDVLVKLGILLPLPRDEPGARDVYSVGGESVPPSADVEEKFLVLMRLPLEASPETMSRFEAFSELQK-DWGVVVKWEFDSGSTPHGLVERLVASCHSIGNVVQDTCWRRGACFVSNEKSIKSAGGTFALALHFLESTVERQTGGTLVVRAFGHRESRAVWGALRFVISSAWRLFKEFPGLGWEAWVECPYHR 2016
L+ L+R +RLS+ NPWE PP +V GI ++ Y++ + G+ V LKVV +G GKTSL +SIK G+ + G ES V V VE+H + ++++D AGQV YYGL QLFLT RA+Y+LV DA+K + + E+L WL L R P ++V+L G D+ + + DVE ++ + W E R G + R + L G+ LVS + P+ R S D P L ++ T + +P S+RLALE+L+ + + R + Q+ G I R L W+ + A P+ A+ + +R+ G L+++ VFLDVE FA L P+ HK +D G GG ++ + L + L + +L A+ LW VL L G+ PL D G ++L+R+ + P+ + + + K D +VV+ F G P G VERL+A C +G + WR GA V + F+L+L + E+ L V G W AL V+S ++ EFPGL CP H+
Sbjct: 326 LLDSLERIYRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGH-----PIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLNLEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRTRRTA--------------VAVDVEHESRQWLESWIEIAR-GHQPRG--ISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELA-------SCSRSKTEQ-----QTRG----ITRAILEEKWQ-AKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHK---RDSYGKIDLGGIRVMDVDSL---DRLDEEHVLEPQLAEDLW---GPVLAPHLLLALKSAGLTFPLSNDSNGG--------------------LVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPP-GFVERLLARCCHLG--LPYPFWRYGALIVGKGAEERM----FSLSLEYSEARK------ILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHK 894 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1101.8.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1101.8.2 >prot_A-nodosum_M_contig1101.8.2 ID=prot_A-nodosum_M_contig1101.8.2|Name=mRNA_A-nodosum_M_contig1101.8.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=603bp MSGIQLVSSSPTLRYSDSGLPDLREKLQSCGTGIRWWIPLSWRLALEVLDback to top mRNA from alignment at A-nodosum_M_contig1101:107325..116578+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1101.8.2 ID=mRNA_A-nodosum_M_contig1101.8.2|Name=mRNA_A-nodosum_M_contig1101.8.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9254bp|location=Sequence derived from alignment at A-nodosum_M_contig1101:107325..116578+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1101:107325..116578+ >mRNA_A-nodosum_M_contig1101.8.2 ID=mRNA_A-nodosum_M_contig1101.8.2|Name=mRNA_A-nodosum_M_contig1101.8.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1809bp|location=Sequence derived from alignment at A-nodosum_M_contig1101:107325..116578+ (Ascophyllum nodosum dioecious)back to top |