prot_A-nodosum_M_contig11.126.6 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.126.6
Unique Nameprot_A-nodosum_M_contig11.126.6
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1347
Homology
BLAST of mRNA_A-nodosum_M_contig11.126.6 vs. uniprot
Match: A0A6H5KTW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW3_9PHAE)

HSP 1 Score: 514 bits (1324), Expect = 7.570e-150
Identity = 555/1787 (31.06%), Postives = 717/1787 (40.12%), Query Frame = 0
Query:   12 RRGALIRAHNVHPVYSGRYLVGLGACLRTSIQILRFSPLAENASYRPLVGGVSLLPLAVHAWKYGFNADFLRKE----MPR--------------------------------------------------------------------------------------------RRNPSNSRKTLNET--VSLGDMYGSKPSNALDGSAESGAGARGSAAHDKATLGHASNEDNAGPTAKEGVDWGNLACSWVFGDSMQSKRLTKRDVYAEFLDHPSGVCAVVDPRGGGCFCDPRET----DIRGQRGGNPNGRSAQEDR--------WDEDDVAMKLAG---AEEG------------MTIQRIDEGWHGDA------ADARNKHQERENVASCLQQTVLRRPPPEAVLRAASRPLSASLEVAIEHA--VGASIVLRD--------------------KTDHANGSATAAGPTSTFTVRTPFGLTSSRSDGLLGWLTYEDRSGTVRAPKTGAV-----------------SREGSKDEXXXXXXSKLDVEVQ---------ASAVRMKTCGAELDSPLSSFGKPAAPMTSP-------WIEDRTGRAQIVLT---RRLVPVTAVGGAVLA-VNGHYRSPSSGAYAERHGKKRGRLSRDVEDSRPPRGGDSEQHTYSASVPRNPASGGAGANRGGLGG--EGMAAQHKFNVRREPALALITKFAVCTEVVVLGAA-----TTAVA-------------------FEQTTRHKAVDGKAGTGDS----------------------------------------DHVLPSRRCATRGGASD-------CS--RVVDGMRLLLRSYIVAEENDVSILDPRVVDEDGKGSAVAVGACRLPNLPSASSSRHDCELPRFG-------------------------------------------------------------------TAAASLRADLHDNSSFRKQ---------GGNVGKVCTLEPQEASGTQATGIDYQTVARRGIRQEAGERTC--------RQLSVSEALVIRLA----------------NEGFVSGRGGASGPRIDPSHERESISVSGLLREVGFRLKTDGGGQRNAGVVRPMAREKGRKPAATSIAEALDEGSRG---------ADMLSRLSTAKMQLCLTLEEGPDTVCVYLALCRASWPVGMVPGYSNILVDGVCRKLSANGKSVYLAVARTGGGNVKVLSLALPPPPAHVAMSGSSR--HPQSCR-----SNMASDSRHLTTRRVKGTCKGP--------------------------------GYCIDCAPLMLFPRRRPEAPVDDAGTADGGGGATCAELMYFRQSRG--GAQQCR-----------RGRGVISATRGGEPVLLDTHPGDASLTQPPTXXXXXXXXXXXXXXXXXXXXXXXTAGGKRDVRSPRAFIDVSGGGATCSSTGSAPKKHVFRDVCAADPWDAGIE-------KNTEAYPAFSIA-------------SVSPSGKAA-AESARAEPRWSLGDMCRRGVLVRAKRRFSCLSVISVRFVRSTMWCKGCGLIREADLALGRCLARCDAATGWEVRWEGSANVDDGTGQALLLLDGDDILKLLKLSAQARRDIETAARLHGSVSFSCGQSGLRVGNNDGAFANAAVVGQAP--LLVAARSALAAAA--QGVSSSRGNIAATCVQVVKGAGGASGNSVTSVVVNVMGEGMETLMLPKVVLQGTDLQDAEPRKEAYDIMARL 1347
            RRGA +R HNVHPVY+G  L+ LGACLRT++Q+LRFSPL ENASYRPL GG + LPLAVHAW+  FNA FLRKE    MPR                                                                                            R  PS S  +L  +  V+ G +  S+PS  + G  E G+        D A  G A         A     W    C WVFG  +++ RL KRDVYAEFLDHP GVC +VDP        P       D RG++   P  R  +E          + E    +   G   AE+G            M IQR DEGWHGD+      +   N H  R    SC       RP PE VLRAA+R LS SLEVA+EHA  +  SI+ R                     KT  A  SA  A   +TFTVRTPFG  + R++GLL WL +  RSG     K  A                  + E    E      + ++   Q         A ++R+ +      SP +  G  AA  +S        W+EDRT  A+++L    R   P         A  +      ++G          GR S D +                            G+ RGG  G  +G   +   +V  +  LAL+ K+AVCTEVVVLG A     T A+A                   F  + +     G+     S                                        D   P R  ++RG  ++       C   R V G+R+L+RSY+V E  DVS+L   +  ++ + S                                                                                               +A+  +  +  D +  ++          G N+G     E Q    T  +G D QT A  G + +  ER          R LSVSEAL+I+LA                             P++   HERES+ V GLLR VGFR   DGGG           R +   PAA +  +    G +G          DM   LS  ++QLCLTLE   D + VYL +   +WPVGMVPG+  + V+GVCR+LS NGKSVYLAVAR GGG V+VLSLALPPPP ++   G S   HP S R     + +  +  +L +  V   C+                                  G+    APL+LFPR R   PV      D    A  + +   ++ RG  G   C             GRGVI ATRGG  VLLDTHP DA  + PP                           G       RA   V  G        S       R        D G++       K    +   ++A             SVS    A  A  A +    +LG M +RG+LVRA   FSCLSV+ VRF ++  WCK CG +RE DL++GRC  RCD ++ WEVRWEGSAN+DDGT Q L+LLDG+D++KLLKLS  AR DIE AAR HG VSFS GQSG   G+++ A A+A  VG AP   L  AR+ALAAAA     SS  G+++A+CVQ     GG+ G    S VV+VMGEGMETL LPK+VL G+ L+  + R EAY ++ARL
Sbjct:  920 RRGANVRVHNVHPVYAGATLIALGACLRTTVQVLRFSPLGENASYRPLTGGPTPLPLAVHAWRQSFNAVFLRKELWAPMPRQQXXXXXXXXXXXXXXXXXXHFQQPPDGSRIGATVSTTPLGWSVSTASGTGDDHRRRTPXXXXXXXXXXXXXXXXXXXXXXXXXRATGTGLPRHPPSPSPSSLQPSGFVTAGQLSRSRPSPGMAGGGEWGSDGETKGGTDTAAAG-ADFLTGGLAMAAMAATWEERVCRWVFGPDVRAMRLPKRDVYAEFLDHPPGVCGIVDPVDLAGLVGPAHESSGCDSRGRK--MPTKRDKEEKSAKTPKRGFYREGSCEVGYGGFTSAEDGSDGEAHILSDDKMLIQRADEGWHGDSYGDEICSGGANGHCSR---PSCCCSCWSCRPSPEDVLRAAARSLSESLEVAVEHAADIVPSIMSRSILCGXXXXXXXESYAGSTGGKTAVARTSAAGAMKNATFTVRTPFGSRAGRAEGLLAWL-HIPRSGKREQAKGEAAPXXXXXXXXXXXXXEVSTMESPLAERPDTVAAAVESRKQPNGEKIIHGAPSLRLSSKDNSSASPRARCGSDAATNSSLASTQACLWLEDRTAWARVMLLAAPRPSGPXXXXXXXXCAYASARVVDVAAGPELAEVVSAAGRYSDDCD---------------------------GGSQRGGQTGCDQGHPGRGDADVSADSTLALVRKYAVCTEVVVLGPAGSPRSTKALAKIAAPKDPSSLAGTASSGSFATSAKSSVAQGRVPRSTSSSKKTASPSPTHXXXXXXXXXXXXXXXXXXXXXXASSYARDGFRPPRTTSSRGDTAEWVGYTIPCETVRAVYGVRVLMRSYLVVEAKDVSLLPGSINGKNSRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASGGIERNKRDEAKNQRHCLDYVNAAAGTNLG----FEHQRHGAT--SGADEQT-ALTGTKGKQKERDLSPRRPLAPRILSVSEALIIQLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKLASGHERESMVVRGLLRYVGFRTVADGGGNGR--------RRQKVLPAAVTAVKDQGHGIKGDLGASTTSEVDMFEVLSEERVQLCLTLEHAADKISVYLGVSPEAWPVGMVPGFCTVQVEGVCRRLSGNGKSVYLAVARAGGGTVRVLSLALPPPPENLPALGWSAPPHPPSVRGVSSTTRLGHEPGYLASMPVPA-CQATTATXXXXXXXXXXXXXXXFMNSSDDSVRSDRVGHTPSSAPLLLFPRPRTR-PVSSFARDD----ADHSGINTSQRIRGSSGGWGCSGHESVDPVVMASGRGVIRATRGGRVVLLDTHPADAPPSPPPNDTISCDGGDNGASVADAAAGSWACPEGNGGAAWKRAR--VGDGSVPPFPLSSRENTSAGRRAATVPVRDLGMDLIPKASSKEVSTWAELTLAGQVSEPVLRVPPRSVSQQPAAMEAPGATSSSSSTLGAMFKRGILVRATTNFSCLSVVGVRFAKAATWCKNCGPVREKDLSMGRCWGRCDVSSNWEVRWEGSANIDDGTAQGLVLLDGEDVVKLLKLSTIARDDIEEAARRHGPVSFS-GQSG---GHSNSALASA--VGAAPPTALAQARAALAAAAGRASCSSRAGHVSASCVQAFPRGGGSRGGGYGSAVVDVMGEGMETLTLPKLVLHGSGLEVVDARGEAYAVLARL 2643          
BLAST of mRNA_A-nodosum_M_contig11.126.6 vs. uniprot
Match: D7G4W4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W4_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 2.960e-63
Identity = 127/226 (56.19%), Postives = 160/226 (70.80%), Query Frame = 0
Query: 1124 SLGDMCRRGVLVRAKRRFSCLSVISVRFVRSTMWCKGCGLIREADLALGRCLARCDAATGWEVRWEGSANVDDGTGQALLLLDGDDILKLLKLSAQARRDIETAARLHGSVSFSCGQSGLRVGNNDGAFANAAVVGQAPLLVAARSALAAAA--QGVSSSRGNIAATCVQVVKGAGGASGNSVTSVVVNVMGEGMETLMLPKVVLQGTDLQDAEPRKEAYDIMARL 1347
            +LG M + G+LVRA   FSCLSV+ VRF ++  WCK CG +RE DL+ GRC  RCD ++ WEVRWEGSAN+DDGT QAL+LLDG+D++KLLK+S  AR  IE AAR HG VSFS GQSG   G+++ A A+A      P L  AR+ALAAAA     SS  G+++A+CVQ     GG+ G    S VV+VMGEGMETL LPK+VLQG+ L+  + R EAY ++ARL
Sbjct:   55 TLGTMFKHGILVRATTNFSCLSVVCVRFAKAATWCKNCGPVREKDLSFGRCWGRCDVSSNWEVRWEGSANIDDGTAQALVLLDGEDVVKLLKISTIARNGIEEAARRHGPVSFS-GQSG---GHSNSALASAVGPAPPPALAQARAALAAAAGRASCSSRAGHVSASCVQTFPRGGGSRGGGYGSAVVDVMGEGMETLTLPKLVLQGSGLEVVDARGEAYAVLARL 276          
BLAST of mRNA_A-nodosum_M_contig11.126.6 vs. uniprot
Match: D7G4W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W5_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.430e-26
Identity = 242/915 (26.45%), Postives = 318/915 (34.75%), Query Frame = 0
Query:   12 RRGALIRAHNVHPVYSGRYLVGLGACLRTSIQ---ILRFSPLAENASYRPLVGGVSLLPLAVHAWKYGFNADFLRKEMPRRRNPSNSRKTLNETVSLGDMYGSKPSNALDGSAESGAGARGSAAHDKATLGHASNEDNAGPTAKEGVDWGNLACSWVFGDSMQSKRLTKRDVYAEFLDHPSGVCAVVDP-----------RGGGCFCDPR-------------ETDIRG--QRGGNPNGRSAQEDRWDEDDVAMKLAGAEEGMTIQRIDEGWHGDAAD------ARNKHQERENVASCLQQTVLRRPPPEAVLRAASRPLSASLEVAIEHAVGASIVLRDKTDHANGSATAAGPTSTFTVRTPFGLTSSRSDGLLGWLTYEDRSGTVRAPKTGAVS--REGSKDEXXXXXXSKLDVEVQASAVRMKTCGAELDSPLSSFGKPAAPMTSPWIEDRTGRAQIVLTRRLVPVTAVG--GAV-----------LAVNGHYRSPSSGAYAERHGKKRGRLSRDVEDSRPPRGGDSEQHTYSASVPRNPASGGAGANRGGLGGEGMAAQHKFNVRREPALALITKFAVCTEVVVLGAATTAVAFEQTTRHKAV---DGKAGTGDSDHVL-------------------------------------------------------PSRRCATRGGASD-------CS--RVVDGMRLLLRSYIVAEENDVSILDPRVVDEDGKGSAVAVGACRLPNLP-------------SASSSRHDCELPRFGTAAASLRADLHDNSSFRKQGGNVGKVCTLEPQEA-SGTQATGIDYQTVARRGIRQEAGERTCRQLSVSEALVIRLANEG----------------FVSGRGGASGPRIDPSHERESISVSGLLREVGFRLKTDGGG 779
            RRGA +R HNVHPVY+G  L+GLGACLRT++Q   ++    L+ + S + + GG                                           G+  G        G+  + AGA      D  T G                 W    C WVFG  M++ RL KRDVYAEFL+HP GVC ++DP              GC    R             +T  RG  + GG     S      D  D    +  +++ M IQR DEGWHGD+ +        N H  R    SC       RP PE VLRAA+RPLS SLE             R      N                     SSRSD    +   E R           V   R  SKD                S+   +  G    +  SS     A +   W+EDRT  A++VL     P +  G  GAV           +AV        SGA  +RH       S D +       GDS++   +     +P  G AG                  V  +  LAL+ K+AVCTEVVVLG   +  + + +    A+      AG                                                               P R  ++ G  ++       C   R VDG+R L+RSY+V E  DVS+L PR    +GK S                           A++ RH  +   +  AAA        N  F  Q  + G     + Q A SGT     +     RR +         R LSVSEAL+++LA  G                         GP++   HERES+ V GLLR+VGFR   DGGG
Sbjct:   62 RRGANVRVHNVHPVYAGATLIGLGACLRTTVQPSGLVTAGQLSRSRSSQRMAGG-------------------------------------GXXXXXGEKMG--------GTDTAAAGA------DVLTWG-----------VSMAATWEERVCRWVFGQDMRAMRLRKRDVYAEFLNHPPGVCGIIDPVDLVDLVGPAQDSSGCGSCRRNMPTKRDQEEERPKTPKRGFYREGGYEGXXSGSTSAEDGSDGEAHIL-SDDDMLIQRADEGWHGDSHEDEICSGGANGHCSR---PSCCCSCSSCRPSPEEVLRAAARPLSESLEWRXXXXEPRPFNRRKDCHGTN--------------------ISSRSDEERHFHAVESRKQPSGEKSIHGVPSLRPSSKDN---------------SSASPRARGGSDAATNSSLASNQACL---WLEDRTAWARVVLLAAPRPSSPSGATGAVGCAHASTRVVDVAVGPELAEVVSGA--DRH-------SDDFD-------GDSQRGGQTGCDQGHPGRGDAG------------------VSADATLALVRKYAVCTEVVVLGPTGSPRSTKASATISALKDPSSLAGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYPRYGFRPPRTTSSPGDTAEGVGYTIPCETVRAVDGVRFLMRSYLVVEAKDVSLL-PR--SSNGKNSRTXXXXXXXXXXXXXXXXGIERNKRDEATNQRHCLD---YVNAAAGT------NLGFEHQ--HHGATSGEDEQTALSGTTGKQKERDLSPRRPL-------VPRILSVSEALIVQLAAAGAXXXXXXXXXXXXXXXXXXXXXXPGGPKLASGHERESMVVRGLLRDVGFRTVADGGG 817          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.126.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KTW3_9PHAE7.570e-15031.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4W4_ECTSI2.960e-6356.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4W5_ECTSI1.430e-2626.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 371..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1014..1028
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 988..1054

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:1686593..1693340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.126.6mRNA_A-nodosum_M_contig11.126.6Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 1686593..1693340 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.126.6 ID=prot_A-nodosum_M_contig11.126.6|Name=mRNA_A-nodosum_M_contig11.126.6|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1347bp
GRLGSAVPLCDRRGALIRAHNVHPVYSGRYLVGLGACLRTSIQILRFSPL
AENASYRPLVGGVSLLPLAVHAWKYGFNADFLRKEMPRRRNPSNSRKTLN
ETVSLGDMYGSKPSNALDGSAESGAGARGSAAHDKATLGHASNEDNAGPT
AKEGVDWGNLACSWVFGDSMQSKRLTKRDVYAEFLDHPSGVCAVVDPRGG
GCFCDPRETDIRGQRGGNPNGRSAQEDRWDEDDVAMKLAGAEEGMTIQRI
DEGWHGDAADARNKHQERENVASCLQQTVLRRPPPEAVLRAASRPLSASL
EVAIEHAVGASIVLRDKTDHANGSATAAGPTSTFTVRTPFGLTSSRSDGL
LGWLTYEDRSGTVRAPKTGAVSREGSKDEGSRDQGSKLDVEVQASAVRMK
TCGAELDSPLSSFGKPAAPMTSPWIEDRTGRAQIVLTRRLVPVTAVGGAV
LAVNGHYRSPSSGAYAERHGKKRGRLSRDVEDSRPPRGGDSEQHTYSASV
PRNPASGGAGANRGGLGGEGMAAQHKFNVRREPALALITKFAVCTEVVVL
GAATTAVAFEQTTRHKAVDGKAGTGDSDHVLPSRRCATRGGASDCSRVVD
GMRLLLRSYIVAEENDVSILDPRVVDEDGKGSAVAVGACRLPNLPSASSS
RHDCELPRFGTAAASLRADLHDNSSFRKQGGNVGKVCTLEPQEASGTQAT
GIDYQTVARRGIRQEAGERTCRQLSVSEALVIRLANEGFVSGRGGASGPR
IDPSHERESISVSGLLREVGFRLKTDGGGQRNAGVVRPMAREKGRKPAAT
SIAEALDEGSRGADMLSRLSTAKMQLCLTLEEGPDTVCVYLALCRASWPV
GMVPGYSNILVDGVCRKLSANGKSVYLAVARTGGGNVKVLSLALPPPPAH
VAMSGSSRHPQSCRSNMASDSRHLTTRRVKGTCKGPGYCIDCAPLMLFPR
RRPEAPVDDAGTADGGGGATCAELMYFRQSRGGAQQCRRGRGVISATRGG
EPVLLDTHPGDASLTQPPTPPPPEHPPEKAAAGAAQPKRRKSTAGGKRDV
RSPRAFIDVSGGGATCSSTGSAPKKHVFRDVCAADPWDAGIEKNTEAYPA
FSIASVSPSGKAAAESARAEPRWSLGDMCRRGVLVRAKRRFSCLSVISVR
FVRSTMWCKGCGLIREADLALGRCLARCDAATGWEVRWEGSANVDDGTGQ
ALLLLDGDDILKLLKLSAQARRDIETAARLHGSVSFSCGQSGLRVGNNDG
AFANAAVVGQAPLLVAARSALAAAAQGVSSSRGNIAATCVQVVKGAGGAS
GNSVTSVVVNVMGEGMETLMLPKVVLQGTDLQDAEPRKEAYDIMARL
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