mRNA_A-nodosum_M_contig11.56.1 (mRNA) Ascophyllum nodosum dioecious
|
Overview
Homology
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: D8LIA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIA1_ECTSI) HSP 1 Score: 172 bits (437), Expect = 1.730e-46 Identity = 101/200 (50.50%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 1 REAMEEALQAAAKATGGDLTIQQIKKLHKDQ---MEQNAGNYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLE----------------RGVSVGSDGVE--------EGSWFKFNDHMVTPFDPREIETTCFGGVAVSTS---GVSTTVEHERTSNAFLLFYEKAVPR 510
REAMEEALQAAA+A+GGDLT++Q+ KLH++Q M+++AG+YLYNL GILVH GV+ GHYYSYIRDRG++AY+ G G GA+ + G +GV G+ GV +G+W+KF D VTPFDP+EIE CFGG +STS GV+TTVEHERT+NA LLFYEK P+
Sbjct: 1566 REAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGPGARAGAADDKTRGDAGDGGRKRAXXXXXXXXXXXXXXXXXXKGVEGGAAGVRGSESAAGGQGAWYKFEDDDVTPFDPQEIEACCFGGTTLSTSTWQGVNTTVEHERTANALLLFYEKVQPK 1765
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A6H5KKZ1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ1_9PHAE) HSP 1 Score: 152 bits (384), Expect = 2.330e-39 Identity = 103/245 (42.04%), Postives = 131/245 (53.47%), Query Frame = 1
Query: 1 REAMEEALQAAAKATGGDLTIQQIKKLHKDQ---MEQNAGNYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGS-------------GAGFMEGLE---------RGVSVGSDGVE--------EGSWFKFNDHMVTPFDPREIETTCFGGVAVSTS------------------------------------------GVSTTVEHERTSNAFLLFYEKAVPR 510
R AMEEALQAAA+A+GGDLT++Q+ KLH++Q M+++AG+YLYNL GILVH GV+ GHYYSYIRDRG++AY+ G G GA +++ G AG G +GV G+ GV +G+W+KF D VTPFDP+EIE CFGG +STS GV+TTVEHERT+NA LLFYEK P+
Sbjct: 2368 RRAMEEALQAAAEASGGDLTLEQVTKLHEEQSAKMKEDAGDYLYNLAGILVHAGVAQGGHYYSYIRDRGKSAYEDGAGP----GARARAADDKGRXXXXXXXXVDRKRAAGAERGAXXXXXXXXXXKGVQGGAAGVRGSDSAAGGQGAWYKFEDDDVTPFDPQEIEACCFGGTTLSTSVSNKRYNCLLCTYRGERKVVRCVADVYDEPTRTMYYCHKTWQGVNTTVEHERTANALLLFYEKVQPK 2608
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A7S2JVI8_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JVI8_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.710e-18 Identity = 61/174 (35.06%), Postives = 84/174 (48.28%), Query Frame = 1
Query: 4 EAMEEALQAAAKATGGDLTIQQIKKLHKDQMEQNAGN-YLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEG-SWFKFNDHMVTPFDPREIETTCFGGVAVSTS----GVSTTVEHERTSNAFLLFYEKAVP 507
EAME+ QA+ + + GD+++ D Y Y L G+++H GV+ GHYYSYI+DR R SGA + G +V S+ E W++F+D VTPFDP IE+ CFGG + G TT E E+ +NA +LFYEK P
Sbjct: 813 EAMEKEQQASMQDSNGDVSMDDACDAENDADALLPDEEYEYKLAGVIIHAGVAQGGHYYSYIKDRTRQ-----------------------SGASSGDVTSEGKTVDSNAANEDVKWYRFDDEDVTPFDPSSIESECFGGKVKKETKWPNGQVTTTETEQFANALMLFYEKVTP 963
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A225WNK5_9STRA (Ubiquitin-specific protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNK5_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.900e-14 Identity = 52/139 (37.41%), Postives = 62/139 (44.60%), Query Frame = 1
Query: 112 NYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAV-STSGVSTTVEHERTSNAFLLFYEKAVPREESIT 525
NY Y L GILVH GV+ GHYYS+I D + E WFK++D VTPFDP IET CFGGV S G + ++E E SNA +LFYEK +P E T
Sbjct: 1939 NYEYRLKGILVHSGVAQGGHYYSFIYDH---------------------------------------------LSE-KWFKYDDEDVTPFDPANIETECFGGVQRRSWHGSNNSMEMEVFSNALMLFYEKVIPVEPGAT 2031
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: M4BN22_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN22_HYAAE) HSP 1 Score: 79.3 bits (194), Expect = 6.900e-14 Identity = 54/145 (37.24%), Postives = 64/145 (44.14%), Query Frame = 1
Query: 112 NYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAV-STSGVSTTVEHERTSNAFLLFYEKAVPREESITGDGSAE 543
+Y Y L GILVH GV+ GHYYS+I D + E WFK++D VTPFDP IET CFGGV S G + ++E E SNA +LFYEK VP E S AE
Sbjct: 1955 DYEYRLKGILVHSGVAQGGHYYSFIYDH---------------------------------------------MSE-KWFKYDDEDVTPFDPANIETECFGGVQRRSWHGSNNSMEMEVFSNALMLFYEKVVPVERSAASVSEAE 2053
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A662X9W0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X9W0_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.250e-14 Identity = 55/146 (37.67%), Postives = 66/146 (45.21%), Query Frame = 1
Query: 115 YLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAV-STSGVSTTVEHERTSNAFLLFYEKAVPREESITG--DGSAE 543
Y Y L GILVH GV+ GHYYS+I D V E WFK++D VTPFDP IET CFGGV S G + ++E E SNA +LFYEK +P E T +G+AE
Sbjct: 1998 YEYRLKGILVHSGVAQGGHYYSFIYDH---------------------------------------------VSE-KWFKYDDEDVTPFDPSNIETECFGGVQRRSWHGSNNSMEMEVFSNALMLFYEKVIPVEPESTAATEGAAE 2097
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A7S3Q2Z7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2Z7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 2.360e-13 Identity = 46/136 (33.82%), Postives = 60/136 (44.12%), Query Frame = 1
Query: 112 NYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAVSTS----GVSTTVEHERTSNAFLLFYEKAVP 507
+Y Y L G+LVH GV+ GHYYS+IRDR G++ W++F+D VTPFDP IE+ CFGG + G TVE E+ NA ++FYEK P
Sbjct: 2073 DYEYKLAGVLVHHGVAQGGHYYSFIRDRTE-----------------------------------------CGLDTNQWYRFDDEDVTPFDPANIESECFGGKVKKETKWPNGQVNTVETEQMCNALMIFYEKVKP 2167
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A5D6XIP1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XIP1_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.200e-13 Identity = 49/132 (37.12%), Postives = 60/132 (45.45%), Query Frame = 1
Query: 112 NYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAVSTSGVSTTVEHERTSNAFLLFYEKAVP 507
N+ Y L GILVH GV+ GHYYS+I D V E WFK++D V+PFDP IET CFGGV + S+++E E SNA +LFYEK VP
Sbjct: 1932 NFEYRLKGILVHSGVAQGGHYYSFIYDH---------------------------------------------VSE-KWFKYDDEDVSPFDPANIETECFGGVQRRSWHGSSSMEMEVFSNALMLFYEKVVP 2017
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A7S4F1U3_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F1U3_CHRCT) HSP 1 Score: 76.3 bits (186), Expect = 6.460e-13 Identity = 52/157 (33.12%), Postives = 78/157 (49.68%), Query Frame = 1
Query: 97 EQNAGNYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAY--QGGDGKSQVDGASGSSSNXXGSGAGFMEGLE----RGVSVGSDGVEEGS------------WFKFNDHMVTPFDPREIETTCFGGVAVSTSGVSTTVEHE-----RTSNAFLLFYEK 498
+Q Y+Y LVG+LVH G ++ GHYYS+I++R R + G + G G+ + G G+G + GL GVS GV G+ W FND +V FD R+I CFGG+ + + +H R ++A++LFYE+
Sbjct: 29 DQEGQGYIYQLVGVLVHTGTADSGHYYSFIKERRRGVHCCDGAPSEGTAAGGLGNIGSGGGVGSGSIGGLHVASAAGVSASGGGVVRGAGSSVATKPTSCEWLHFNDTLVEWFDERDIGKCCFGGIEPFVAWDAEGNKHVQRTQIRQNSAYMLFYER 185
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Match: A0A0M9F2Z7_FUSLA (Ubiquitinyl hydrolase 1 n=2 Tax=Fusarium sambucinum species complex TaxID=569360 RepID=A0A0M9F2Z7_FUSLA) HSP 1 Score: 70.5 bits (171), Expect = 7.940e-11 Identity = 40/140 (28.57%), Postives = 62/140 (44.29%), Query Frame = 1
Query: 82 HKDQMEQNAGNYLYNLVGILVHEGVSNEGHYYSYIRDRGRNAYQGGDGKSQVDGASGSSSNXXGSGAGFMEGLERGVSVGSDGVEEGSWFKFNDHMVTPFDPREIETTCFGGVAVSTSGVSTTVEHERTSNAFLLFYEKA 501
H E ++ ++ LVG+LVH G + GHYYSYIR+R V+ SW +FND MVTP+DP ++E + FGG S + +++ +A++LFY++A
Sbjct: 1865 HLSNPESDSEEDIFELVGVLVHSGTAESGHYYSYIRER------------------------------------------PSSVDRPSWVEFNDDMVTPWDPAQMEQSTFGGTDQRPLHDSNGLVYDKNYSAYMLFYQRA 1962 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig11.56.1 >prot_A-nodosum_M_contig11.56.1 ID=prot_A-nodosum_M_contig11.56.1|Name=mRNA_A-nodosum_M_contig11.56.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=180bp MEEALQAAAKATGGDLTIQQIKKLHKDQMEQNAGNYLYNLVGILVHEGVSback to top mRNA from alignment at A-nodosum_M_contig11:603527..605330+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig11.56.1 ID=mRNA_A-nodosum_M_contig11.56.1|Name=mRNA_A-nodosum_M_contig11.56.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1804bp|location=Sequence derived from alignment at A-nodosum_M_contig11:603527..605330+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig11:603527..605330+ >mRNA_A-nodosum_M_contig11.56.1 ID=mRNA_A-nodosum_M_contig11.56.1|Name=mRNA_A-nodosum_M_contig11.56.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=540bp|location=Sequence derived from alignment at A-nodosum_M_contig11:603527..605330+ (Ascophyllum nodosum dioecious)back to top |