prot_A-nodosum_M_contig11.19.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11.19.1
Unique Nameprot_A-nodosum_M_contig11.19.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length293
Homology
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BLAST of mRNA_A-nodosum_M_contig11.19.1 vs. uniprot
Match: A0A6H5KTK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTK9_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 2.650e-41
Identity = 113/260 (43.46%), Postives = 142/260 (54.62%), Query Frame = 0 
Query:   18 RRGLVAIATLVLPFIFLATNGFVHNTPMAPTGSRTETRKYYGLSSPAQHQYQQLGGLPIRFLHYRRRQP-RNQISEKRNVCNRYLRRHPPTSSSRV----SPPRMISISAEDLHVSVVSGAASTT----------------LVVQASYIDPHTKIRRTWTASRSEQDFYDLGVSLMGALGG--AGGKLPGPPRMGSSPAVLEGYLRRLMGVPVVTSLPALYVFLDAPQDLTDQEPVLFGEVISSGDDGDNDFLKRRGKRF 254
            RR +VA    ++PF+ LA +  +H T +      T   K  G + P      Q   LP ++  +RR    R  IS + +         P + SSR+    S    +S++AE L V VVS    T                 L +QASY++P T  RRTWTASRSE+DF+ LGV+LMG L G  A  K+PGPP  GSSP V E YLRRL+ VPVVTSLPALY FLDAP DL  QEPVLFGEV+      D+DF   R KR+
Sbjct:    4 RRSVVASTAALIPFLLLAADALLHPTRL------TTPAKPAGSNKPGAAPVPQCSTLPQQYFCFRRTSKYRGDISSRCSSSXXXXXXXPRSRSSRLEDALSYTTRMSLAAEGLDVWVVSDDGRTXXXXXXXXXXXXXXAKLLSIQASYVEPGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPVVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLV-QEPVLFGEVV------DDDFGGGRAKRY 250
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BLAST of mRNA_A-nodosum_M_contig11.19.1 vs. uniprot
Match: D7G4B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4B6_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 4.090e-34
Identity = 77/119 (64.71%), Postives = 88/119 (73.95%), Query Frame = 0 
Query:  138 LVVQASYIDPHTKIRRTWTASRSEQDFYDLGVSLMGALGG--AGGKLPGPPRMGSSPAVLEGYLRRLMGVPVVTSLPALYVFLDAPQDLTDQEPVLFGEVISSGDDGDNDFLKRRGKRF 254
            L +QASY++  T  RRTWTASRSE+DF+ LGV+LMG L G  A  K+PGPP  GSSPAV E YLRRL+ VPVVTSLPALY FLDAP DL  QEPVLFGEV+      D+DF   R KR+
Sbjct:   41 LSIQASYVELGTGTRRTWTASRSEKDFFALGVTLMGKLAGSAADAKVPGPPPEGSSPAVFEVYLRRLIDVPVVTSLPALYEFLDAPPDLV-QEPVLFGEVV------DDDFGGGRAKRY 152
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTK9_9PHAE2.650e-4143.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4B6_ECTSI4.090e-3464.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 152..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11contigA-nodosum_M_contig11:226768..230762 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11.19.1mRNA_A-nodosum_M_contig11.19.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11 215576..230796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11.19.1 ID=prot_A-nodosum_M_contig11.19.1|Name=mRNA_A-nodosum_M_contig11.19.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=293bp
MPETLPVKRERFECANMRRGLVAIATLVLPFIFLATNGFVHNTPMAPTGS
RTETRKYYGLSSPAQHQYQQLGGLPIRFLHYRRRQPRNQISEKRNVCNRY
LRRHPPTSSSRVSPPRMISISAEDLHVSVVSGAASTTLVVQASYIDPHTK
IRRTWTASRSEQDFYDLGVSLMGALGGAGGKLPGPPRMGSSPAVLEGYLR
RLMGVPVVTSLPALYVFLDAPQDLTDQEPVLFGEVISSGDDGDNDFLKRR
GKRFGALTRAPLDLCGWVRRTAHKTKWTGGQGRPWPGLWGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf