prot_A-nodosum_M_contig10.180.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig10.180.1
Unique Nameprot_A-nodosum_M_contig10.180.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length477
Homology
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BLAST of mRNA_A-nodosum_M_contig10.180.1 vs. uniprot
Match: D7FPY8_ECTSI (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY8_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 2.140e-47
Identity = 127/342 (37.13%), Postives = 160/342 (46.78%), Query Frame = 0 
Query:   70 FDPQEASLFVYVCTHSAEITKGKGIAGSYLVASVTSWKSKEQLARTAVPSETFAEAIGRIQVRHKIVFFDVVHTAKDWRGFKARNLYPSRELYDNAARLSGAVVIGSCRIGGTREVNLEILRKTTETIWAIEDPTNGGGGSHAGGRVSTGDNAGGSSIVSFKLCDDDKAGSTDDANASWNGNGSSLGNTNEVFGSCRTSDSGARVHQPEDSGRQRGFECGRFSNDGKLAGSSASRKNPRIVIAVMDDDDTKDNTQGCDRRQRSFGNALKDVAGGREVSLCQDDTMRACEPVCDRAVYGEEKSVFGRAVRDALGGECIASSGTASPVLIVHLYNFIVQRLDSF 411
            FDP+E  L VYVCTH A I+KGKG+AG+YLVA+ TSWKS+EQLA +AV  +TFA AI RIQ+RHK++F DVVHT +   GFK R+LYP R LYD+AA L GAVV+GSCRIG T EV+L++LR      WA  +P +  GG +                         KA +   A AS  G+G + G  +E  G                                                                                          MRAC  V DRA Y +  SVFGRAVRD L G+C+ ++   S VL+VHLY+FI +    F
Sbjct:  235 FDPEEGLLLVYVCTHVAVISKGKGVAGTYLVATDTSWKSREQLATSAVLLQTFAAAIDRIQLRHKVLFLDVVHTERKHEGFKTRHLYPPRNLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRGEAADFWAAVEPRHNRGGKN-------------------------KARARKGALASGGGSGMAKGQQHEEGG------------------------------------------------------------------------------------------MRACAAVYDRANYEDIMSVFGRAVRDGLKGQCVENT-KLSRVLVVHLYDFIRREFSPF 460
[Close]
BLAST of mRNA_A-nodosum_M_contig10.180.1 vs. uniprot
Match: A0A6H5KZI5_9PHAE (Fibronectin type-III domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZI5_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 2.620e-43
Identity = 144/421 (34.20%), Postives = 188/421 (44.66%), Query Frame = 0 
Query:   71 DPQEASLFVYVCTHSAEITKGKGIAGSYLVASVTSWKSKEQLARTAVPSETFAEAIGRIQ--------------------------VRHKIVFFDVVHTAKDWRGFKARNLYPSRELYDNAARLSGAVVIGSCRIGGTREVNLEILRKTTETIWA-IEDPTNGGGGSHAGGRV--STGDNAGGSS----------------------------------IVSFKLCDDDKAGSTDDANASWNGNGSSLGNTNEVFGSCRTSDSGARVHQPEDSGRQRGFECGRFSND----GKLAGSSASRKNPRIVIAV----------MDDDDTKDNTQGCDRRQRSFGNALKDVAGGREVSLCQ---DDTMRACEPVCDRAVYGEEKSVFGRAVRDALGGECIASSGTASPVLIVHLYNFIVQRLDSF 411
            DP+E  L VYVCTH A I++GKG+AG+YLVA+ TSWKS+E LA +AV  ETFA AI RIQ                          +RHK++F DVVHT ++  GFK R+LYP R+LYD+AA L GAVV+GSCRIG T EV+L++LR+ T   WA +E   NGGG + A G V  S  D A  S                                                             S  G              G R         QR ++ G  S+D        G+   R+  R+ I            +D   + +N      +  +         GG  ++  Q   +  MRAC  V DRA Y E  SVFGRAVRD L G+C+ ++   S VL+VHLY+FI +    F
Sbjct:  274 DPEEGLLLVYVCTHVAVISRGKGVAGTYLVATNTSWKSREHLATSAVLLETFAAAIDRIQATVFPHIFTDHCPLRPPQHFGVPLSKLRHKVLFLDVVHTEREHEGFKTRHLYPPRDLYDSAAVLCGAVVVGSCRIGQTSEVDLDVLRRETAGFWASVERRHNGGGKNKARGGVGDSETDRATSSGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSSGTGGNRXXXXXXXXXXXGRR--------NQRSYKHGGGSSDEDVRNAFRGNKRDRRRHRLQIKTSGRGKRVPRSLDSLASGNNRGETSPKSGTVRKGALASGGGSGMAKGQQHEEGGMRACAAVYDRANYEEIMSVFGRAVRDGLKGQCVENT-KLSRVLVVHLYDFIRREFSPF 685
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10.180.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPY8_ECTSI2.140e-4737.13Fibronectin type-III domain-containing protein n=1... [more]
A0A6H5KZI5_9PHAE2.620e-4334.20Fibronectin type-III domain-containing protein n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10contigA-nodosum_M_contig10:1800162..1802048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10.180.1mRNA_A-nodosum_M_contig10.180.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig10 1798129..1815536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig10.180.1 ID=prot_A-nodosum_M_contig10.180.1|Name=mRNA_A-nodosum_M_contig10.180.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=477bp
MEEINRDPKKREKTRPLEVNLTRRTAREVENIGIDLRDNSQSGGVEHPNK
GSQDAVTNKDMAEEEKVEEFDPQEASLFVYVCTHSAEITKGKGIAGSYLV
ASVTSWKSKEQLARTAVPSETFAEAIGRIQVRHKIVFFDVVHTAKDWRGF
KARNLYPSRELYDNAARLSGAVVIGSCRIGGTREVNLEILRKTTETIWAI
EDPTNGGGGSHAGGRVSTGDNAGGSSIVSFKLCDDDKAGSTDDANASWNG
NGSSLGNTNEVFGSCRTSDSGARVHQPEDSGRQRGFECGRFSNDGKLAGS
SASRKNPRIVIAVMDDDDTKDNTQGCDRRQRSFGNALKDVAGGREVSLCQ
DDTMRACEPVCDRAVYGEEKSVFGRAVRDALGGECIASSGTASPVLIVHL
YNFIVQRLDSFERLSPRRTGSKEWRGDGPNQRAGFRKKKAAAEGMLKQAS
WWWRSVIRSAAQVGHEIYPTGELRVT*
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