mRNA_A-nodosum_M_contig108.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE) HSP 1 Score: 554 bits (1428), Expect = 1.480e-183 Identity = 283/485 (58.35%), Postives = 355/485 (73.20%), Query Frame = 1
Query: 1 SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEE--PTPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVP-VRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTVSTVAIWREMGTP 1446
S +LLT ISAAWR HY RLAAD TGNS+ D+W W PQR+H+ LD I EM+EAL RI+R+K+PG DG+PAD L+LA EE +PMG +L +LN +WK+ IP+ R STVV IPKKGD+TDM N+RGISLM T LKVLV+++S RLN AFE+ +FS++QAGFR +EECVTQ+ACLLEI +RRK Y++FVDLKKAYDTVPQEAL AKL FYGVRG L FIRALY+ S+I VR G +S+ L RGVRQGCPLSPVLFNIFIND++DGAE GVP V + RIP LLFADDLV +S +R + M ++ W AENEMS GI KCG+M + L + P RW++AG+ +PIV YTYLGL F LDV M+ +++A G++LV +TP+L R IPVP+KVAVVRGV++PRLLFGAEV+GM +IT +QV +N+ +RMV GM+ +TVS+VA+WRE+ P
Sbjct: 446 SRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIP 930
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO) HSP 1 Score: 349 bits (895), Expect = 3.890e-106 Identity = 195/497 (39.24%), Postives = 288/497 (57.95%), Query Frame = 1
Query: 1 SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSP----DRWTRW-GQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEEPTPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVG---GTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPV-----RMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSM--LHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAI-TEPMQVLLNQVWRMVGGMNRNST-VSTVAIWREMG 1440
SG L TE I+A W HY L DP + + W R G P L+ ++ I E+ +AL R+ NKA G DGI A+ LKLA+ +P G +LL ++N +W + +P W +S VVSI KKGD+T M NYRGIS+M +K+L+ V++ RL + + + Q GF EEC Q A + +I RR+ +GLPTY F+DL+KAYDT+P E L +KL+ G+ G L F++ALY S +QV+ G G +S+P + RG+RQGCP SP+LFNIFIND+ DG E G V + R+P LFADD V L+ S + M ++W ++ M G++KCG+M + + + L + RWQ+ G+ VP+VSEY YLG +DL + +++ DRV K +R V+ L L R IP+ ++ +V++ ++P L +G EV+GM+ +Q +LNQ R + G+ + V+T + RE+G
Sbjct: 338 SGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAIYAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELG 834
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG) HSP 1 Score: 325 bits (833), Expect = 5.670e-95 Identity = 184/472 (38.98%), Postives = 274/472 (58.05%), Query Frame = 1
Query: 10 LLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAV-AEEPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTVSTV 1419
L+T S AW H+ LA D TGNS+S ++W+ G + + E D + +TE+ AL NK+PG DGIP+++ KL EEPT P ++N++W+ IP S +V IPKKGD+ D NYRGISL+ T KVL +++ RL+ K I K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP +AL+ K+ G+ G+ I ALY ++ VRVG +S+ + GVRQGCP SP+LF+IFIND++DG + VP G+ T IP LLFADD V L+ S ++ ++T W+ + EM + +KCGIM +N ML + I G+ + V+EY YLG+ F + S L + G++ ++ FL R IP M++A+VR V++P L +G E++GM+ +Q + + R+V G+ R++ + +
Sbjct: 1029 LVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVYTE-CDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIKGVKVP-----GIDTEIPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRI 1488
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG) HSP 1 Score: 315 bits (808), Expect = 1.570e-93 Identity = 178/470 (37.87%), Postives = 269/470 (57.23%), Query Frame = 1
Query: 10 LLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTVS 1413
L+T+ A + W H+ LA D TGNS+S +W G+ + E D + + E+ AL NK+PG DGIP+++ K+ E EPT P+ +L ++ +W + IP S V+ IPKKGD+ D NYRGISL+ T KVL +++ RL K I +K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP EAL+ K+ G+ G+ I ALY ++ VRVG +S+ D GVRQGCP SP+LF+I+IND++DG + +P G++ IP LLFADD V L+ S ++ ++T W+ + EM + KCGIM +N ML + I G+ + V EY YLG+ F + S L + ++ ++ FL + +P M+ A++R V+IP L +G E++GM+ +Q + + R+V G+ R++ +S
Sbjct: 343 LITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTAEFTE-CDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP-----GIEECIPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALS 800
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG) HSP 1 Score: 314 bits (804), Expect = 6.440e-93 Identity = 180/472 (38.14%), Postives = 270/472 (57.20%), Query Frame = 1
Query: 1 SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTV 1410
S L+T+ + W H+ LA D TGNS+S ++W G E D + +TE+ AL NK+PG DGIP++ KL E EPT P LL ++N +W + IP S VV IPKKGD+ + NYRGISL+ T KV+ ++S RL K I +K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP +AL+ K+ G+RG+ I ALY ++ VRVG +S+ + GVRQGCP SP+LF+IFIND++ G + +P G+ T I LLFADD V L+ S ++ +++ W+ + EM + +KCGIM +N ML + + G+ + V+EY YLG+ F + S L G++ ++ FL + IP M+VA++R V+IP L +G E++GM+ + +Q + + R+V G+ +++ +
Sbjct: 402 SRQLVTDSETKAEVWAAHFEELARDSTGNSRSAEKWRDIGSDSTEVFTE-CDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIKGVKIP-----GIDTEIAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTAL 861
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1YD24_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YD24_9FUNG) HSP 1 Score: 307 bits (787), Expect = 8.910e-93 Identity = 173/469 (36.89%), Postives = 264/469 (56.29%), Query Frame = 1
Query: 10 LLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTV 1410
L+T+ A + W H+ LA D TGNS+S D+W G P D + + E+ +AL NK+PG DGIP+++ KL E EPT P ++N +W S +P S VV IPKKGD+ D NYRGISL+ T KV+ +++ RL K I +K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP +AL+ K+ G+ + I ALY ++ VRVG +S+ + GVRQGCP SP+LF+I+IND++ G + +P G + I LLFADD V L+ S ++ +++ W+ + EM + +KCGIM +N ML + + G+ + V+ Y YLG+ F + S L + G++ ++ FL + IP M+ A++R V+IP L +G E++GM+ +Q + + R+V G+ R++ +
Sbjct: 256 LITDTNAKAEVWATHFEELAKDSTGNSRSADKWENIGTIPAV--FPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEKEPTSPFAKVTSRIINGIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGDKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP-----GTEATISGLLFADDAVVLAESPSELQIALEKISAWSQKWEMQINQEKCGIMGINSCTGML------FTVMGKPIEQVTNYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAVRLVAGVGRSTAL 711
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM) HSP 1 Score: 316 bits (810), Expect = 3.070e-92 Identity = 189/488 (38.73%), Postives = 268/488 (54.92%), Query Frame = 1
Query: 1 SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQC-PQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAEE---------------PTPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPK-KGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKE--GIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSE---PADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGV--KTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPA-RWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLL-NQVWRMVG 1386
S +LT+ I+ AW ++G LA D TG+ W R G P LE L+ + + E+ AL ++ KAPG DG+ AD LKL + P PM L +L MW T+PS W + VV I K +GD +M NYRGISL+ LK+L +++ RL + + K QAGFR +EEC+ L E+ +RR++M LP+Y+ F+DLKKAYDTVP AL KL+ GVRG+ L FI+ LY S + R PA L RG+RQGCP+SP+LFN+FIND++D GV V G+ T + LLFADDLV LS +++ +T W + EM G+ KC IM ++ P+S L +W + GQ VP+V EY YLG LD+ + RV + K+ + +++PFL R IP+ ++ V +V P L+GAE++G+ + T P+ L N + R+ G
Sbjct: 623 SKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVP---GLPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAG 1107
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG) HSP 1 Score: 314 bits (804), Expect = 7.960e-92 Identity = 176/469 (37.53%), Postives = 269/469 (57.36%), Query Frame = 1
Query: 10 LLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTV 1410
L+T+ A + W H+ +LA D TGNS+S D+W G D + + E+ +AL NK+PG DGIP+++ KL E EPT P+ + ++N++W S +P S VV IPKKGD+ D NYRGISL+ T KV+ +++ RL K I +K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP +AL+ K+ G+ + I ALY ++ VRVGG +S+ + GVRQGCP SP+LF+I+IND++ G + +P G + I LLFADD V L+ S ++ +++ W+ + EM + +KCGIM +N ML + I G+ V VS Y YLG+ F + S L + G++ + ++ FL + IP M+ A++R V+IP L +G E++GM+ +Q + + R+V G+ R++ +
Sbjct: 582 LITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTI--AAVFPECDAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLKGVEIP-----GTEAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTAL 1037
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A0F9ZBM3_9MICR (Endonuclease-reverse transcriptase n=2 Tax=Nosema ceranae TaxID=40302 RepID=A0A0F9ZBM3_9MICR) HSP 1 Score: 307 bits (786), Expect = 4.320e-91 Identity = 178/493 (36.11%), Postives = 276/493 (55.98%), Query Frame = 1
Query: 1 SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQR-KHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLK-LAVAEEP-TPMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKG-DLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVV----------------NKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTVSTV 1419
+G+++ + W H+G LA+D TG+S+ + W + P++ + DE + Y ++ AL KAPG DGIPAD+LK +++ EEP + AL + +W + IP VV IPKK + +MG+ RGI+L+ + KV+ + +NR++ E G+ +K QAGFR EEC Q A L E+ KRR + TY+ F+D KAYD VPQ AL+ KL+ G+ G L +++LY R+ VRVG + S + GVRQGCP SP+LF++FIND++ G + +P GV + LLFADD V ++ S + R +T W+ ++EMSV KCGIM + NK + Q P ++I G +VP VSEY YLG+RFT DL + SM+ +KG++ + + L + +PV +K+ ++ + L +GAEV+GM+ + +Q ++N+ R+V G RN+ + +
Sbjct: 194 TGNVIHDKKGKEELWARHFGDLASDKTGHSRDLEYWN--SKFPKKCEAFPECDESLSYEDLRIALKTTPWGKAPGLDGIPADILKVISMEEEPESKAAQALWITVRAIWNEAVIPREINVGEVVPIPKKVMSVVNMGDTRGIALLPSLTKVVAKIAANRISQIAETHGLLAKEQAGFRTLEECTAQVATLYEVVKRRSIRNQSTYLAFIDYAKAYDKVPQGALLRKLESIGIGGHLLQVVKSLYEDPRMCVRVGSSTSPVVNYHCGVRQGCPASPILFDLFINDLLQGMDGVAIP-----GVSEAVSGLLFADDAVVMAESESALRRNLDLLTSWSEKHEMSVNASKCGIMKIRATEDVIAGGPNFLQPNKKARVEQQEPEPFEIMGNVVPEVSEYIYLGIRFTPDLCLNSMMQHVESKGRKAIGAMYYLLSKKDMPVYVKILSIKVKLQSILTYGAEVWGMSTLRCKGIQRIMNEACRLVVGGGRNAAMDRI 679
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Match: A0A1R1YJD8_9FUNG (LINE-1 retrotransposable element ORF2 protein n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YJD8_9FUNG) HSP 1 Score: 310 bits (795), Expect = 7.100e-91 Identity = 175/469 (37.31%), Postives = 271/469 (57.78%), Query Frame = 1
Query: 10 LLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYLDEDIPYTEMLEALNRIRRNKAPGQDGIPADLLKLAVAE-EPT-PMGNALLAVLNQMWKSSTIPSAWRNSTVVSIPKKGDLTDMGNYRGISLMATALKVLVVVLSNRLNGAFEKEGIFSKAQAGFRRKEECVTQSACLLEITKRRKLMGLPTYMLFVDLKKAYDTVPQEALMAKLDFYGVRGRTLGFIRALYSQSRIQVRVGGTVSEPADLLRGVRQGCPLSPVLFNIFINDVMDGAERSGVPVRMKGGVKTRIPALLFADDLVALSRSRKGIERMTRQVTEWTAENEMSVGIQKCGIMVVNKPLSMLHQTPARWQIAGQLVPIVSEYTYLGLRFTADLDVPSMLSDRVAKGKRLVDTLTPFLRTRVIPVPMKVAVVRGVVIPRLLFGAEVYGMNKAITEPMQVLLNQVWRMVGGMNRNSTV 1410
L+T+ + W H+ LA D TGNS+S ++W G E D + + E+ +AL K+PG DGIP++ K E EPT P+ L ++ ++W + +IP S VV IPKKGD+ + NYRGISL+ T KV+ +++ RL K I +K QAGFR +EECV Q+ L E+ +RRK+ GL T++ F+D KAYD VP EAL+ K+ G+ G+ I ALY ++ VR+GG +S+ + GVRQGCP SP+LF+I+IND++DG + VP GV+ IP LLFADD V L+ S ++ +++ W+ + EM + +KCG+M +N ML + + G+ + V+EY YLG+ F + S L + G++ ++ FL + IP M+V+++R V+IP L +G E++GM+ + +Q + N R+V G+ R++ +
Sbjct: 717 LITDSETKAEVWAAHFEELAKDSTGNSRSAEKWHGMGNDSAGVFTE-CDTPLFWAEICDALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPLAKVLFRLIKEIWDNESIPEQLDPSVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIARRLCKIENKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRACGIGGKVYRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKVP-----GVEEVIPGLLFADDAVVLAESPAELQIALEKLSAWSNKWEMQINQEKCGVMGINGNTGML------FTVMGKPINQVTEYKYLGVLFNDKWNNLSALKNNRENGRKAFHSMYYFLTKKDIPTAMRVSLIRTVLIPILCYGGEIFGMSTTRSGTLQKVANDAARLVAGVGRSTAL 1173 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig108.1.1 >prot_A-nodosum_M_contig108.1.1 ID=prot_A-nodosum_M_contig108.1.1|Name=mRNA_A-nodosum_M_contig108.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=491bp SGSLLTEVTAISAAWRDHYGRLAADPTGNSQSPDRWTRWGQCPQRKHLEYback to top mRNA from alignment at A-nodosum_M_contig108:4971..6443- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig108.1.1 ID=mRNA_A-nodosum_M_contig108.1.1|Name=mRNA_A-nodosum_M_contig108.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1473bp|location=Sequence derived from alignment at A-nodosum_M_contig108:4971..6443- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig108:4971..6443- >mRNA_A-nodosum_M_contig108.1.1 ID=mRNA_A-nodosum_M_contig108.1.1|Name=mRNA_A-nodosum_M_contig108.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1473bp|location=Sequence derived from alignment at A-nodosum_M_contig108:4971..6443- (Ascophyllum nodosum dioecious)back to top |