mRNA_A-nodosum_M_contig10720.1.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig10720.1.1
Unique NamemRNA_A-nodosum_M_contig10720.1.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: D7G191_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G191_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.120e-66
Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 1 
Query:    1 SGWKPSPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALAHR 393
            + W+P PL+ + FALLLRCMVSLWPYSGQ ++PM+GDYEAQRHWME+T ALPLHQWYRF  ++YWGLDYPPLTAYVSW CG+ S +VEPASM LG SRGYE  SHKAFMR+TVL+LDL +FF AAAAL  R
Sbjct:   12 TKWQPGPLVVVWFALLLRCMVSLWPYSGQGERPMYGDYEAQRHWMEITNALPLHQWYRF-DLEYWGLDYPPLTAYVSWACGQLSRVVEPASMALGLSRGYETQSHKAFMRMTVLLLDLAIFFPAAAALTSR 141
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A4P9Y0K8_9FUNG (Alpha-1,3-glucosyltransferase n=1 Tax=Piptocephalis cylindrospora TaxID=1907219 RepID=A0A4P9Y0K8_9FUNG)

HSP 1 Score: 151 bits (382), Expect = 1.030e-40
Identity = 73/126 (57.94%), Postives = 86/126 (68.25%), Query Frame = 1 
Query:   16 SPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALAHR 393
            +PL+   F+LLLR    LWPYSG    PM+GDYEAQRHWME+T  LP+ QWYR+  +QYWGLDYPPLTAYVSWVCG     + PA + L  SRGYE    K FMR TVLV D+ ++  AA   A R
Sbjct:   60 APLVVALFSLLLRWTTGLWPYSGAGIPPMYGDYEAQRHWMELTWHLPMTQWYRY-DLQYWGLDYPPLTAYVSWVCGAVGNWINPAWVALDVSRGYEDGPSKTFMRATVLVTDILIYLPAAYGFARR 184
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A2R5LPK4_9ACAR (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Ornithodoros turicata TaxID=34597 RepID=A0A2R5LPK4_9ACAR)

HSP 1 Score: 141 bits (356), Expect = 1.720e-40
Identity = 66/117 (56.41%), Postives = 83/117 (70.94%), Query Frame = 1 
Query:   31 ICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQ---IQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGA 372
            I  ALLLR   SL+PYSG  +QPM GDYEAQRHWME+T  LP+H+WY+      +QYWGLDYPPLTAY SW+CGK ++ ++   + L  SRG+E   HK FMR T L+ D+ +FF A
Sbjct:   15 IFLALLLRWGTSLYPYSGAGKQPMFGDYEAQRHWMEITANLPVHEWYKNSSQNDLQYWGLDYPPLTAYHSWICGKIASFIDDRWVALRSSRGFESYEHKLFMRYTALISDVLIFFPA 131
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A3R6XAZ2_9STRA (Alpha-1,3-glucosyltransferase n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XAZ2_9STRA)

HSP 1 Score: 147 bits (371), Expect = 2.970e-40
Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 1 
Query:   10 KPSPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALA 387
            K    L +C ALL+R +VSL  YSG +  PM+GDYEAQRHWME+T  LP+H WY F  +QYWGLDYPPLTAYVS+  G  +  VEPA + L  SRGYE PS K FMRL+VLV D+ +F  +   LA
Sbjct:   32 KSGSALVLCAALLVRWLVSLHSYSGMSTPPMYGDYEAQRHWMELTYHLPVHDWY-FYDLQYWGLDYPPLTAYVSYFFGYIAQFVEPALVALDTSRGYETPSSKVFMRLSVLVCDIVLFIPSLLLLA 156
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: W4FD49_9STRA (Alpha-1,3-glucosyltransferase n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FD49_9STRA)

HSP 1 Score: 147 bits (371), Expect = 1.860e-39
Identity = 73/126 (57.94%), Postives = 88/126 (69.84%), Query Frame = 1 
Query:   10 KPSPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALA 387
            K    L +C ALL+R +VSL  YSG +  PM+GDYEAQRHWME+T  LP+H WY F  +QYWGLDYPPLTAYVS+  G  +  VEPA + L  SRGYE PS K FMRL+VLV D+ +F  +   LA
Sbjct:   12 KSGSALVLCAALLVRWLVSLHSYSGMSTPPMYGDYEAQRHWMELTYHLPVHDWY-FYDLQYWGLDYPPLTAYVSYFFGYIAQFVEPALVALDTSRGYETPSSKVFMRLSVLVCDIVLFIPSLLLLA 136
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A1V9Z1G8_9STRA (Alpha-1,3-glucosyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1G8_9STRA)

HSP 1 Score: 146 bits (368), Expect = 4.990e-39
Identity = 73/121 (60.33%), Postives = 87/121 (71.90%), Query Frame = 1 
Query:   25 LAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALA 387
            L +  ALL+R +VSL  YSG A  PM GDYEAQRHWME+T  LP+ +WY F  +QYWGLDYPPLTAYVS++CG  +  +EPA + L  SRGYE  + K FMRLTV+V DL VF  A A LA
Sbjct:   17 LVLVMALLVRWVVSLHGYSGMATPPMFGDYEAQRHWMELTFHLPISRWY-FYDLQYWGLDYPPLTAYVSYICGAVANAIEPALVSLDASRGYETETSKVFMRLTVVVCDLIVFIPALALLA 136
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: F1A4M3_DICPU (Alpha-1,3-glucosyltransferase n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A4M3_DICPU)

HSP 1 Score: 145 bits (365), Expect = 1.890e-38
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 1 
Query:   22 LLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFI---QIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDL 354
            LL I  +LL R +VSL  YSGQ + PM GDYEAQRHWME+TT L +H+WY       + YWGLDYPPLTAY+SWV GK   IVEPASMEL  SRGYE P+ K FMR TV+V DL
Sbjct:   18 LLMIVVSLLARYLVSLNSYSGQGKPPMFGDYEAQRHWMEITTKLDVHEWYFNTTDNNLLYWGLDYPPLTAYLSWVYGKIGEIVEPASMELYTSRGYETPTSKLFMRATVIVSDL 131
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A7S1J1U8_9EUGL (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J1U8_9EUGL)

HSP 1 Score: 140 bits (353), Expect = 2.270e-38
Identity = 67/125 (53.60%), Postives = 86/125 (68.80%), Query Frame = 1 
Query:    1 SGWK-PSPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFI---QIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVF 363
            SGW  P+ +L +  +LL+RC V   P+SGQ++ PM+GDYEAQRHWME+T  LP+ QWY       +QYWGLDYPPLTA+ SWVCGK    + P++  L  SRG+E    K +MR TVLV DL V+
Sbjct:   19 SGWSLPATVLIVLTSLLVRCAVGFHPHSGQSKPPMYGDYEAQRHWMELTVNLPIAQWYNQTAKNDLQYWGLDYPPLTAFHSWVCGKVGEKLLPSAFALRSSRGHETAESKMYMRATVLVADLIVY 143
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A1Y1KIA1_PHOPY (Alpha-1,3-glucosyltransferase n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1KIA1_PHOPY)

HSP 1 Score: 144 bits (364), Expect = 2.960e-38
Identity = 70/120 (58.33%), Postives = 84/120 (70.00%), Query Frame = 1 
Query:   25 LAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQ---IQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAA 375
            L I  A+LLRC VSL PYSG  + PM+GDYEAQRHWME+T  LP+  WYR      +QYWGLDYPPLTAY S++CG  S  + P  + L +SRGYE   HK FMR TVL++DL +F  AA
Sbjct:   12 LGILTAILLRCGVSLHPYSGAGKPPMYGDYEAQRHWMEITVNLPITDWYRNTSTNDLQYWGLDYPPLTAYHSYLCGVVSLFINPEYVSLTKSRGYETEEHKLFMRYTVLLVDLLLFIPAA 131
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BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Match: A0A067CH63_SAPPC (Alpha-1,3-glucosyltransferase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CH63_SAPPC)

HSP 1 Score: 144 bits (362), Expect = 3.980e-38
Identity = 71/121 (58.68%), Postives = 86/121 (71.07%), Query Frame = 1 
Query:   25 LAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTALPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGYEIPSHKAFMRLTVLVLDLGVFFGAAAALA 387
            L +  ALL+R +VSL PYSG    PM GDYEAQRHWME+T  LP+ +WY +  + YWGLDYPPLTAYVS+VCG  ++IVEPA + L  SRGYE  + K +MR TVL  DL VF  + A LA
Sbjct:   17 LVVVVALLVRWLVSLHPYSGMGLSPMFGDYEAQRHWMELTFQLPVSRWYHY-DLLYWGLDYPPLTAYVSYVCGAVASIVEPALVALDASRGYETVTSKVYMRATVLACDLVVFIPSLALLA 136
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig10720.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G191_ECTSI4.120e-6674.05Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A4P9Y0K8_9FUNG1.030e-4057.94Alpha-1,3-glucosyltransferase n=1 Tax=Piptocephali... [more]
A0A2R5LPK4_9ACAR1.720e-4056.41Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=O... [more]
A0A3R6XAZ2_9STRA2.970e-4057.94Alpha-1,3-glucosyltransferase n=8 Tax=Aphanomyces ... [more]
W4FD49_9STRA1.860e-3957.94Alpha-1,3-glucosyltransferase n=2 Tax=Aphanomyces ... [more]
A0A1V9Z1G8_9STRA4.990e-3960.33Alpha-1,3-glucosyltransferase n=1 Tax=Achlya hypog... [more]
F1A4M3_DICPU1.890e-3864.04Alpha-1,3-glucosyltransferase n=1 Tax=Dictyosteliu... [more]
A0A7S1J1U8_9EUGL2.270e-3853.60Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=E... [more]
A0A1Y1KIA1_PHOPY2.960e-3858.33Alpha-1,3-glucosyltransferase n=2 Tax=Photinus pyr... [more]
A0A067CH63_SAPPC3.980e-3858.68Alpha-1,3-glucosyltransferase n=2 Tax=Saprolegnia ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig10720contigA-nodosum_M_contig10720:273..1494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G191
Preferred nameALG6
PFAMsAlg6_Alg8
Model size396
Max annot lvl2759|Eukaryota
KEGG koko:K03848
KEGG ReactionR06262
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006091,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009060,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0015980,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0040003,GO:0042175,GO:0042281,GO:0042335,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046527,GO:0048856,GO:0055114,GO:0070085,GO:0071704,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons4
Evalue6.75e-67
EggNOG OGsKOG2575@1|root,KOG2575@2759|Eukaryota
EC2.4.1.267
Descriptiondolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
Cds size396
COG categoryM
CAZyGT57
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866460.1848755-CDS-A-nodosum_M_contig10720:272..4451680866460.1848755-CDS-A-nodosum_M_contig10720:272..445Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10720 273..445 +
1680866460.1971242-CDS-A-nodosum_M_contig10720:798..8091680866460.1971242-CDS-A-nodosum_M_contig10720:798..809Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10720 799..809 +
1680866460.212947-CDS-A-nodosum_M_contig10720:981..11151680866460.212947-CDS-A-nodosum_M_contig10720:981..1115Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10720 982..1115 +
1680866460.2210774-CDS-A-nodosum_M_contig10720:1416..14941680866460.2210774-CDS-A-nodosum_M_contig10720:1416..1494Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig10720 1417..1494 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig10720.1.1prot_A-nodosum_M_contig10720.1.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig10720 273..1494 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig10720.1.1

>prot_A-nodosum_M_contig10720.1.1 ID=prot_A-nodosum_M_contig10720.1.1|Name=mRNA_A-nodosum_M_contig10720.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=132bp
SGWKPSPLLAICFALLLRCMVSLWPYSGQAQQPMHGDYEAQRHWMEVTTA
LPLHQWYRFIQIQYWGLDYPPLTAYVSWVCGKASAIVEPASMELGRSRGY
EIPSHKAFMRLTVLVLDLGVFFGAAAALAHR*
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mRNA from alignment at A-nodosum_M_contig10720:273..1494+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig10720.1.1 ID=mRNA_A-nodosum_M_contig10720.1.1|Name=mRNA_A-nodosum_M_contig10720.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1222bp|location=Sequence derived from alignment at A-nodosum_M_contig10720:273..1494+ (Ascophyllum nodosum dioecious)
AGTGGATGGAAGCCAAGTCCTCTGCTTGCTATATGTTTTGCTCTTCTGCT
GCGGTGCATGGTTTCCTTGTGGCCGTACTCCGGACAGGCACAGCAACCCA
TGCACGGAGATTATGAAGCTCAGCGGCACTGGATGGAGGTCACCACCGCG
TTGCCGCTGCATCAATGGTACAGGTAAAAGCCACCAGGAGTACTTGATGT
TTATGCTGGAATCTTATGGCGCAGGCATACCATATATATCTTCGGTTTGC
TGTCGTGCTCTTTTCCAGAAACCCTGCGCCTTCTTTGCCCAACACACCCA
GTTGATGCCCACAGTCTCCTATTTAGATGTGATGACCATACATAGAGCTA
CTATTAAATACTCTGTAAATACCTGGTACAACTGCTGTACATACCAAAAT
CTATCGCAACCGATGACATCTTACCCCACGCGGGCACTTGATTCACCTCA
AGAGTCCTTGGGCACGTTTATTCGTCATGAAGACGACTGCTATGATGCTG
GAAGCGTACAAGTAGAAGCCTGTCAGATTCATTCAAAGTCTCCTTGCAGA
CAGACACAGGGGCAGCAGAAGGAGAATCGAATATATGGTGATATCCAGCT
TTGAACGACTTTTAATAGTCCATTGTTGGTACAGTACAGTACAGCATATA
AAATTGCTCCGCATTCTGGACTACGCGTTGTCGAACGTCATTCCAGGTTC
GTCCTTGAGTACAGTACTGGGGACTGGACTATCCGCCCTTGACAGCGTAC
GTATCTTGGGTGTGCGGCAAGGCGTCCGCCATAGTCGAACCCGCATCAAT
GGAACTCGGACGGTCTCGCGGGTACGAAATACCAAGCCATAAGGTGACCC
CCAAAGCTCTTTAGGCGTGGCAAACTCATGATTCAAGGATCACCGGACAG
TGGTGCCGGGTTGCAACAATATGTTGGACTTTTGGATTTTCGTAGGCCCG
CGAAAATGTAAGCGTTTTCCAAGTGATAAATAGGCATTGTCCGGCAACAC
TGCGGAATCCAGCCGGTCACGTCAGTACATGAAACACGAGATGCAATTTC
AGGTGCGCTCATCAAAGTTCGATGGAGTGAGAATCGCGCCGCGCTTGCGA
GAATGATAGGCCAGCCTCTAAATAAACCATTTGCGCGCTTGCAGGCATTT
ATGCGACTGACGGTGTTGGTGCTTGATCTCGGGGTGTTCTTTGGGGCGGC
TGCGGCTCTCGCCCACAGGTAG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig10720:273..1494+

>mRNA_A-nodosum_M_contig10720.1.1 ID=mRNA_A-nodosum_M_contig10720.1.1|Name=mRNA_A-nodosum_M_contig10720.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=396bp|location=Sequence derived from alignment at A-nodosum_M_contig10720:273..1494+ (Ascophyllum nodosum dioecious)
AGTGGATGGAAGCCAAGTCCTCTGCTTGCTATATGTTTTGCTCTTCTGCT
GCGGTGCATGGTTTCCTTGTGGCCGTACTCCGGACAGGCACAGCAACCCA
TGCACGGAGATTATGAAGCTCAGCGGCACTGGATGGAGGTCACCACCGCG
TTGCCGCTGCATCAATGGTACAGATTCATTCAAATACAGTACTGGGGACT
GGACTATCCGCCCTTGACAGCGTACGTATCTTGGGTGTGCGGCAAGGCGT
CCGCCATAGTCGAACCCGCATCAATGGAACTCGGACGGTCTCGCGGGTAC
GAAATACCAAGCCATAAGGCATTTATGCGACTGACGGTGTTGGTGCTTGA
TCTCGGGGTGTTCTTTGGGGCGGCTGCGGCTCTCGCCCACAGGTAG
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