prot_A-nodosum_M_contig1043.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1043.7.1
Unique Nameprot_A-nodosum_M_contig1043.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length84
Homology
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BLAST of mRNA_A-nodosum_M_contig1043.7.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI)

HSP 1 Score: 134 bits (338), Expect = 5.480e-35
Identity = 72/84 (85.71%), Postives = 74/84 (88.10%), Query Frame = 0 
Query:    1 MASVRIATALAVVLAAPNLIFDEVTASDGFSEAYKYTGERRHLQTCTRSDDALDPTPPNRRDNVAFASRRDAARRERDGTGTVC 84
            MA VRIATALAVVLAAP L FDEVTAS  F E +K+TGE RHLQTCT SDDALDPT PNRRDNVAFASRRDAARRERDGTGTVC
Sbjct:   81 MARVRIATALAVVLAAPCLAFDEVTASGVFPEEHKHTGEGRHLQTCTNSDDALDPTAPNRRDNVAFASRRDAARRERDGTGTVC 164
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BLAST of mRNA_A-nodosum_M_contig1043.7.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO)

HSP 1 Score: 61.6 bits (148), Expect = 3.450e-9
Identity = 30/41 (73.17%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:   44 QTCTRSDDALDPTPPNRRDNVAFASRRDAARRERDGTGTVC 84
            QTC+ SDDA DPTPPN RD+ AFASR  AA+RE +GTGTVC
Sbjct:    1 QTCSTSDDADDPTPPNERDDEAFASRVAAAKRELEGTGTVC 41
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1043.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
O82433_FUCDI5.480e-3585.71Vanadium bromoperoxidase n=1 Tax=Fucus distichus T... [more]
PRXV_ASCNO3.450e-973.17Vanadium-dependent bromoperoxidase n=1 Tax=Ascophy... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 46..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1043contigA-nodosum_M_contig1043:141296..142267 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1043.7.1mRNA_A-nodosum_M_contig1043.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1043 141296..153170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1043.7.1 ID=prot_A-nodosum_M_contig1043.7.1|Name=mRNA_A-nodosum_M_contig1043.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=84bp
MASVRIATALAVVLAAPNLIFDEVTASDGFSEAYKYTGERRHLQTCTRSD
DALDPTPPNRRDNVAFASRRDAARRERDGTGTVC
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