prot_A-nodosum_M_contig1.173.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1.173.1
Unique Nameprot_A-nodosum_M_contig1.173.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length185
Homology
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 1.810e-48
Identity = 89/131 (67.94%), Postives = 107/131 (81.68%), Query Frame = 0
Query:    1 MLPLNVIRRTTAHLPKTGGEQSEMEDWSVYLNASKVSRAQGEAALEGERANVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYRSYLRRTGRGDIAERTHGAK 131
            ++PLN IRRTTAHLP+ GG + E+EDWS  L+ASK++ A+ +AAL+GERANVALAR CV  LGGVPSM   FDSTN PEEKT++TV+AHL ARLL+SS EIRS IL+QR YRS+L RTGRGD+ ER   AK
Sbjct:  827 IIPLNAIRRTTAHLPRIGGGRGELEDWSASLDASKITEAECKAALDGERANVALARHCVAELGGVPSMLAPFDSTNRPEEKTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAK 957          
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 1.430e-44
Identity = 88/144 (61.11%), Postives = 106/144 (73.61%), Query Frame = 0
Query:    1 MLPLNVIRRTTAHLPKTGGEQSEMEDWSVYLNASK-------------VSRAQGEAALEGERANVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYRSYLRRTGRGDIAERTHGAK 131
            ++PLN IRRTTAHLP+ GG + E+EDWS  L+ SK             ++ A+ +AAL+GERANVALAR CV  LGGVPSM   FDSTN PEEKT++TV+AHL ARLL+SS EIRS IL+QR YRS+L RTGRGD+ ER   AK
Sbjct:  683 IIPLNAIRRTTAHLPRIGGGRGELEDWSASLDPSKEVSCCAAEVDQGCITEAECKAALDGERANVALARHCVAELGGVPSMLAPFDSTNRPEEKTIITVVAHLCARLLESSAEIRSTILVQRVYRSFLERTGRGDLVERARAAK 826          
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 1.110e-18
Identity = 48/97 (49.48%), Postives = 70/97 (72.16%), Query Frame = 0
Query:   27 WSVYLNASKVSRAQGEAALEGERANVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYRSYLRRTGRGDI 123
            W + L AS+V+    +AAL+ ER NVAL  +CV+ LGGVP M   FDST+ P+E+T+V  +A+L +RLL SS EIR+   +QR+YR++L+ TGR ++
Sbjct:  848 WMLALEASQVTERDCKAALQRERQNVALFSKCVKALGGVPLMLPIFDSTDCPDERTIVAAIAYLASRLLASSAEIRATQTIQRTYRAHLKSTGREEL 944          
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: A0A1V9Z804_9STRA (Abnormal spindle-like microcephaly-associated protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z804_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.090e-8
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 0
Query:   20 EQSEMEDWSVYLNASK--VSRAQGEAALEGERANVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYRSYLRRTGR 120
            E+SE++ W+    A +  +   + EA L  ERAN A A   V+ LG VP +   FDS+N+PEEK +VT +A+L +RLL +S EI +A  LQ  +    RR  R
Sbjct:  632 EKSEIQ-WTTSDRADRDRIGHDEFEALLRQERANFATANAKVKLLGQVPVLVPEFDSSNLPEEKIIVTFVAYLHSRLLGASREIHAAFCLQHWWLPRFRRLRR 733          
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: A0A7S4IHQ8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHQ8_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.920e-8
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   44 ALEGERANVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYRSYLRR 117
            A+  ER N  LA + + ++GG+P M  +FDS ++PEEK+++  +A L +RL++SS EI + I +Q  YR Y +R
Sbjct: 1024 AISNERRNSNLANKRMLDIGGIPGMLPTFDSRDMPEEKSIILCVAFLCSRLMESSNEILATIAIQGCYRRYRQR 1097          
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Match: A0A8B7NK91_HYAAZ (abnormal spindle-like microcephaly-associated protein homolog n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NK91_HYAAZ)

HSP 1 Score: 57.4 bits (137), Expect = 2.700e-6
Identity = 42/117 (35.90%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    1 MLPLNVIRRTTAHLPKTGG----EQSEMEDWSVYLNASKVSRAQGEAALEGERANVALARQCVQNLGGVPSMQVSFDSTN-IPEEKTVVTVLAHLWARLLKSSTEIRSAILLQRSYR 112
            +LPL++I  +T +  +       + S  + +S    A  VS+ +    L  E+AN A+    + +LGGVP +  S +  N IP+EK +VT LAHL  RLL  S EI++A +LQ ++R
Sbjct: 1858 LLPLHLINDSTTYTMQLQKGVDLDVSADDSFSSMACADDVSQHERHQRLANEKANHAIFADKLCSLGGVPLLVRSCELVNTIPDEKVMVTFLAHLCGRLLDLSEEIKAARVLQMAWR 1974          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1.173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LLN9_ECTSI1.810e-4867.94Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A6H5KRH5_9PHAE1.430e-4461.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z978_9STRA1.110e-1849.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9Z804_9STRA1.090e-841.75Abnormal spindle-like microcephaly-associated prot... [more]
A0A7S4IHQ8_9STRA6.920e-841.89Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A8B7NK91_HYAAZ2.700e-635.90abnormal spindle-like microcephaly-associated prot... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1contigA-nodosum_M_contig1:2112857..2114735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1.173.1mRNA_A-nodosum_M_contig1.173.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1 2112353..2124976 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1.173.1 ID=prot_A-nodosum_M_contig1.173.1|Name=mRNA_A-nodosum_M_contig1.173.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=185bp
MLPLNVIRRTTAHLPKTGGEQSEMEDWSVYLNASKVSRAQGEAALEGERA
NVALARQCVQNLGGVPSMQVSFDSTNIPEEKTVVTVLAHLWARLLKSSTE
IRSAILLQRSYRSYLRRTGRGDIAERTHGAKTERRERLAGNKSLQQDVPA
AMIEEEGGPVGNSVLVSEAQQSHLAAAAIILQSV*
back to top