prot_A-nodosum_M_contig104.51.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig104.51.1
Unique Nameprot_A-nodosum_M_contig104.51.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length68
Homology
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BLAST of mRNA_A-nodosum_M_contig104.51.1 vs. uniprot
Match: D7G5A1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5A1_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 7.190e-5
Identity = 22/26 (84.62%), Postives = 23/26 (88.46%), Query Frame = 0 
Query:    2 SRSSTLAVAAPGGRDRPIRDWKAIGR 27
            SRSSTLAV  PGGR+RPIRDWKAI R
Sbjct:   39 SRSSTLAVMQPGGRNRPIRDWKAIKR 64
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig104.51.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G5A1_ECTSI7.190e-584.62Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig104contigA-nodosum_M_contig104:498599..499054 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig104.51.1mRNA_A-nodosum_M_contig104.51.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig104 498599..499155 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig104.51.1 ID=prot_A-nodosum_M_contig104.51.1|Name=mRNA_A-nodosum_M_contig104.51.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=68bp
PSRSSTLAVAAPGGRDRPIRDWKAIGRFSLSVENEQADAGRDGRTRLARP
NYQARTVTGKYSFSLFS*
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