prot_A-nodosum_M_contig996.38.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig996.38.1
Unique Nameprot_A-nodosum_M_contig996.38.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length775
Homology
BLAST of mRNA_A-nodosum_M_contig996.38.1 vs. uniprot
Match: D7G1P7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P7_ECTSI)

HSP 1 Score: 448 bits (1152), Expect = 5.470e-143
Identity = 343/801 (42.82%), Postives = 427/801 (53.31%), Query Frame = 0
Query:    9 AVVRRRLSRLGMSEQGEGFHDPYGDESQEQEPPWGRGVGAGSEGIIPVQPFREEHTAGGSKFSELLARAKGENPARSFQ---AAPRHSVPPEGPIDYDQDSQWEDQLIGSPNLPDPPLRNEMPGLRLSPEIDYDGLEEASPGNLGSGGGGDRIQRMMQQAQTNDQRQAAGIPPVSAQNTRPS---RADARPLPPSKEEKERALKAAVERQQNMMAKERGINLDDPTLEGTELAKKRALSRAQAEATTGGYVPSSNASDDYLAALKADSKQKHRDLHARLEGRALAADEPNPTMKDPEAPALASPKVGHSSARPKFQQGETSERKFVPQRRTKAMSSIQNSADVYMASLKGVKVEIPN-NPYLTEEGELARPGQKLSPEQIAPSLPPSPKQQPPTSTTMTYTERLXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVSSNAPAAVAPDTRQPAT--PVVSYAEKLKLAREAKAVSVAGSPPPPPVQTVRATPF---------------PVPSRLRPDAFEDADL-EEDDTHAKIMRTMDLLTEHKTKGLVGEEKVAKLRRALVGTRDALRAEMREQPAPWKDAQMSVPPPIAPPSAPQPPRLSLASAHQHAYQAAAAPPTSLTP-------DDRDTLRRCSVLLQAHAHSGLSGRDLVALREGLASSLEIVEGRVGGGVSADSGTNGGGRESVPPSGSEME--AVPASVGGIQSVGGILTEMGVSRKPDAFQPDNNSG-GKGEWTGGSLGEYEKGVGTKALGYLLKHRGGKGYGRGRVKGAQAEEMVSTLAELTEIFQEEMVED 774
            AV R  L  L M++ GEG    +G E  E  P    G G  S  + P  P+REEHT GG++F ELLARA G+          A PR ++PPEG  DYD D+QWE+Q IGSP++PDPPLR  MPGL L PE+DY G  EA                       ND RQ AG+ P ++  +      RA A   P SKEEKERA+KAAVERQQ MMAK RGI+LDDPTLEG ELA+K+ALSRAQAEA  GGYVPSS+A+DDYL +LKADS++K ++  A+L G  L   E  P +        A+  V   SA P    GE  ER   PQ+RT A  SIQN AD YMASLKG+KVE+ + NPYL +E  +  P Q +         PP    +PP    M+Y E++                             V++  PA  A     P++  P +SYAEKLK A+  KA +  G  P       ++ P                P   RL         L +E D+ AK+++ MDLLTEHKT GL GE++V++LR +LV  R+ALRAE   + A                                                     +D   LRRCS LLQAH HSGL+G+DL AL EGLASSL IV  +V  G +                    +   VPA  GGIQSVGG L++MGV++KP +F P+   G G   WTGGSLGE EK   +KALGYLLKHRGGKGYGRG++ GAQAE MV+ LAE+TEI +EEMVE+
Sbjct:    2 AVSRDTLPALSMADDGEGAL--FGPEESEGGP---AGPGGDSNPLGPPPPYREEHTPGGTRFKELLARANGQGAPXXXXXXXAKPRRALPPEGAPDYDDDNQWEEQAIGSPDVPDPPLRENMPGLDLGPELDYGGGGEAXXXXXXXX----XXXXXXXXXXXNDDRQEAGMAPRASPRSPQEVAKRAAAAQAPVSKEEKERAIKAAVERQQKMMAKARGIDLDDPTLEGAELARKKALSRAQAEAQAGGYVPSSSAADDYLNSLKADSQKKQKETQAKLRGEPLPPRE-GPLLSASPPTETATSDVPDKSAAP-LSSGEDYER-VKPQKRTAASWSIQNKADQYMASLKGIKVELADDNPYL-KESLVEEPRQPVR-------RPPXXXXKPPLGPQMSYAEKMKLAKGAKAAGTATAAAPSSNVVA----APVATLPPATEAXXXXXPSSGSPALSYAEKLKQAQAQKAAAGNGVFP-------KSVPXXXXXXXXXXXXXXXAPASRRLLEQDMPSGGLVDEGDSQAKMVKLMDLLTEHKTAGLEGEDRVSELRHSLVDAREALRAETYGRSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAAILRRCSALLQAHVHSGLAGQDLQALVEGLASSLTIVTAQVVTGTAXXXXXXXXXXXXXXXXXXXXDDTGVPAYAGGIQSVGGALSDMGVAKKPASFLPEEGEGDGSAGWTGGSLGEEEKAAASKALGYLLKHRGGKGYGRGKMTGAQAEAMVAALAEVTEIMEEEMVEE 771          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1P7_ECTSI5.470e-14342.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..218
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 364..398
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..606
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 652..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..580

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig996contigA-nodosum_M_contig996:238831..242770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig996.38.1mRNA_A-nodosum_M_contig996.38.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig996 238831..242770 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig996.38.1 ID=prot_A-nodosum_M_contig996.38.1|Name=mRNA_A-nodosum_M_contig996.38.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=775bp
DQRLRTLSAVVRRRLSRLGMSEQGEGFHDPYGDESQEQEPPWGRGVGAGS
EGIIPVQPFREEHTAGGSKFSELLARAKGENPARSFQAAPRHSVPPEGPI
DYDQDSQWEDQLIGSPNLPDPPLRNEMPGLRLSPEIDYDGLEEASPGNLG
SGGGGDRIQRMMQQAQTNDQRQAAGIPPVSAQNTRPSRADARPLPPSKEE
KERALKAAVERQQNMMAKERGINLDDPTLEGTELAKKRALSRAQAEATTG
GYVPSSNASDDYLAALKADSKQKHRDLHARLEGRALAADEPNPTMKDPEA
PALASPKVGHSSARPKFQQGETSERKFVPQRRTKAMSSIQNSADVYMASL
KGVKVEIPNNPYLTEEGELARPGQKLSPEQIAPSLPPSPKQQPPTSTTMT
YTERLKLARAAKSAGTTTTTPPTARATAPAPAVDVSSNAPAAVAPDTRQP
ATPVVSYAEKLKLAREAKAVSVAGSPPPPPVQTVRATPFPVPSRLRPDAF
EDADLEEDDTHAKIMRTMDLLTEHKTKGLVGEEKVAKLRRALVGTRDALR
AEMREQPAPWKDAQMSVPPPIAPPSAPQPPRLSLASAHQHAYQAAAAPPT
SLTPDDRDTLRRCSVLLQAHAHSGLSGRDLVALREGLASSLEIVEGRVGG
GVSADSGTNGGGRESVPPSGSEMEAVPASVGGIQSVGGILTEMGVSRKPD
AFQPDNNSGGKGEWTGGSLGEYEKGVGTKALGYLLKHRGGKGYGRGRVKG
AQAEEMVSTLAELTEIFQEEMVED*
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