prot_A-nodosum_M_contig989.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig989.4.1
Unique Nameprot_A-nodosum_M_contig989.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length616
Homology
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A6H5JRR2_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR2_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 8.520e-61
Identity = 186/507 (36.69%), Postives = 224/507 (44.18%), Query Frame = 0
Query:    9 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYPTGSGNSKSEDDEAGSSTTSSTPHARATYS-------------------------------------RELSSSPGRPRTDSSPKR-----KAETPLPANSNKK-----------AXXXXXXXXXXXXXXXXXXXXEARRENGGGRYVQHSYPYRPEYSGEQAREICREARGAPKKSPQRP------WFYSGS-PAVSEAVIAARYKRPEDHRNVNTATDGSFLHGEEGWMSNGRGGAGGMGGGIGRAG---------------FMRTNTRPDLLGRHPYPYSAPNGRVWGPYREQEES-------GGAMWHDSEETGPSRMVSSDSACSPWGEMH--PSVGGA--DSFERSRARAMVETDVRRSSYPPNSSGGGGVGGGLGRPLGAHPLHRGVQTPAM 429
            DYGFPPARGGRGAPSMFPRKLYQILCETDP ++ WD+DG+SFHIA+ E ++E VMP++YRHNKLTSFQRQLNLYGFKKRGRDEK+ GHYYHP+FQRD PEILG VRRSYP  S    ++    GSS                                                  R      G P     P R     + E  LP +  +                                      NG         P R E  G         A G+P  + +RP      WFY+ S PAVSE V AA  KR  D +      +       + W +         G    R+G                   + R DL     Y Y+  NGR W  YR+QE+S       G   W+DSEE+G SR+ S DSA S W EMH  P  GG   D F+RSR+RAM   ++      P  +GGG       R  G +P H     P M
Sbjct:   11 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIISWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYPVTSPKWVTQ----GSSGAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRRARVVAGFPLRGGVPGRSFGAARQEPDLPPHYRQHHSFRXXXXXXXXHPRHAVPGIGGGYGPMFDERTGMVMNGEDPTAMMMIPGRDEDGG--------VADGSPIGARKRPPPSQGGWFYTSSTPAVSEGVAAAHLKRVTDGKAEMAGGNDHPAAAGDPWAAGAA-----RGSPYARSGAXXXXXXXXXXXXXXXXEKSARRDL-----YRYAPTNGRHWDTYRDQEDSYPLHPKGGWVGWYDSEESGLSRLTSCDSASSTWDEMHARPGAGGGGGDVFDRSRSRAMAAMEMA-----PADAGGGRDPHDPLRDRGGYPSHHPADGPEM 490          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: D8LLB2_ECTSI (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLB2_ECTSI)

HSP 1 Score: 206 bits (524), Expect = 4.590e-60
Identity = 91/110 (82.73%), Postives = 102/110 (92.73%), Query Frame = 0
Query:    9 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYP 118
            DYGFPPARGGRGAPSMFPRKLYQILCETDP ++ WD+DG+SFHIA+ E ++E VMP++YRHNKLTSFQRQLNLYGFKKRGRDEK+ GHYYHP+FQRD PEILG VRRSYP
Sbjct:    2 DYGFPPARGGRGAPSMFPRKLYQILCETDPEIITWDDDGKSFHIANYEEYIEGVMPLFYRHNKLTSFQRQLNLYGFKKRGRDEKNPGHYYHPYFQRDRPEILGGVRRSYP 111          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7R9YBQ9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ9_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.400e-26
Identity = 58/108 (53.70%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    9 DYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRS 116
            DY   P  G RGAP +FPRKL+++L + D AV+ WD +GE F I DM+ F    +  Y++H+K TSFQRQLNLYGF+K  + E+  G+Y HP FQRDHPE L  VRR+
Sbjct:   44 DYKRYPRTGKRGAPQVFPRKLFELLEKEDSAVIRWDEEGECFVIQDMDTFTRESLERYFKHHKFTSFQRQLNLYGFRKIAKGER-CGYYVHPHFQRDHPEWLSKVRRT 150          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7S2BSE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSE7_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.330e-23
Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0
Query:   14 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 115
            P  G RGAP +FPRKLY+IL      ++GW + G+SF I +ME FV +++  Y+RH K +SFQRQLNLYGF+K  +G D    G Y H  F RD PE+L  VRR
Sbjct:    4 PRTGRRGAPQVFPRKLYEILSTEREDIIGWTDSGKSFIIKEMETFVTNILMKYFRHQKYSSFQRQLNLYGFRKVQKGTD---VGSYAHECFIRDQPELLTKVRR 104          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7S2G7U9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G7U9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.700e-22
Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0
Query:   14 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 115
            P  G RGAP +FPRKLY+IL      V+GW + G+SF I +ME+FV  ++  Y+RH K +SFQRQLNLYGF+K  +G D    G Y H  F RD PE L  VRR
Sbjct:   96 PRTGRRGAPQVFPRKLYEILTNERSDVIGWTSSGKSFIILEMEIFVNEILMNYFRHQKYSSFQRQLNLYGFRKIQKGPD---TGAYAHEHFLRDQPESLTFVRR 196          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A835Z6Z9_9STRA (HSF-type DNA-binding-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 2.030e-21
Identity = 53/101 (52.48%), Postives = 66/101 (65.35%), Query Frame = 0
Query:   17 GGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 115
            G RGAP  FPR+LY++L E D +VV W  +GE F I DM+ FV + +  Y++HNK TSFQRQ NLYGF+K  RG D   AG Y H  F++   E L  VRR
Sbjct:    1 GKRGAPQAFPRRLYELLQEEDASVVSWIKNGEGFIINDMDTFVNTTLVKYFQHNKYTSFQRQCNLYGFRKITRGPD---AGMYIHEHFKKGRLEDLVKVRR 98          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7S2R5C8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5C8_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.510e-21
Identity = 62/127 (48.82%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   14 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYPTGSGNSKSEDDEAGSSTTSSTP 140
            P  G RGAP +FPRKLY+IL       + W   G SF I DME FV SV+  Y+RH K +SFQRQLNLYGF+K  +  +  G Y H FF RD  + L  VRR+ P  +G SK++ +EA S ++S  P
Sbjct:   66 PRTGKRGAPQVFPRKLYEILDNESEDTISWTESGHSFVIKDMETFVTSVLMKYFRHQKFSSFQRQLNLYGFRKISKGTE-TGAYCHEFFARDQTDKLRLVRRT-PQVTGRSKAKTEEATSESSSVEP 190          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A835Z401_9STRA (HSF-type DNA-binding-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z401_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.500e-19
Identity = 53/104 (50.96%), Postives = 64/104 (61.54%), Query Frame = 0
Query:   14 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRR 115
            P  G RGAP  FPR+LY+IL E DP++V W   GE F + +M LF    +  Y+RHN  TSFQRQ NLYGFKK  RG D    G YYH  F+    E L ++RR
Sbjct:   55 PKTGKRGAPQAFPRRLYEILQEEDPSIVSWVKGGEGFKVNNMHLFANKTLVNYFRHNNYTSFQRQCNLYGFKKLTRGPD---TGMYYHEHFKAGRYEDLNNIRR 155          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7S3H846_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H846_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 4.470e-19
Identity = 46/110 (41.82%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   19 RGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHPFFQRDHPEILGDVRRSYPTGSGNSKSED 128
            R   + FP KL+ ++   D  +VGW   G SF + DM+ FV  ++P +++HN  TSFQRQLNLYGF++    +K  G YYHP FQ+   E+   +RR    GS  S  +D
Sbjct:   29 RNYSNTFPVKLFDLVSSEDEGIVGWQGHGTSFQVRDMDKFVNLILPKHFKHNNFTSFQRQLNLYGFRRSASYDK--GAYYHPQFQQGQRELAESIRRVLAPGSEGSGGKD 136          
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Match: A0A7S2R0W2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0W2_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 5.670e-19
Identity = 47/105 (44.76%), Postives = 68/105 (64.76%), Query Frame = 0
Query:   14 PARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESFHIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKK--RGRDEKHAGHYYHPFFQRDHPEILGDVRRS 116
            P  G  G  + FPRKL ++L + DPA+V W   G++F + D + F+  ++P Y+RH KLTSFQRQLNLYGF++  +G D    G Y H +F R+ PE+   ++RS
Sbjct:   22 PGTGPTGHSNPFPRKLMEMLRKEDPAIVCWLPRGDAFTVRDADKFINDILPRYFRHTKLTSFQRQLNLYGFRRITKGPD---VGAYRHEWFNREKPELCIQMKRS 123          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig989.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRR2_9PHAE8.520e-6136.69HSF_DOMAIN domain-containing protein n=1 Tax=Ectoc... [more]
D8LLB2_ECTSI4.590e-6082.73HSF_DOMAIN domain-containing protein (Fragment) n=... [more]
A0A7R9YBQ9_9STRA3.400e-2653.70Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2BSE7_9STRA2.330e-2351.92Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S2G7U9_9STRA2.700e-2252.88Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A835Z6Z9_9STRA2.030e-2152.48HSF-type DNA-binding-domain-containing protein (Fr... [more]
A0A7S2R5C8_9STRA4.510e-2148.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835Z401_9STRA2.500e-1950.96HSF-type DNA-binding-domain-containing protein n=1... [more]
A0A7S3H846_9STRA4.470e-1941.82Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2R0W2_9STRA5.670e-1944.76Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000232Heat shock factor (HSF)-type, DNA-bindingSMARTSM00415hsfneu3coord: 21..116
e-value: 2.5E-17
score: 73.6
IPR000232Heat shock factor (HSF)-type, DNA-bindingPFAMPF00447HSF_DNA-bindcoord: 25..115
e-value: 3.6E-23
score: 81.9
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 19..117
e-value: 8.1E-26
score: 92.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..599
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..537
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..467
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 451..558
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 395..420
NoneNo IPR availablePANTHERPTHR10015:SF206HEAT SHOCK TRANSCRIPTION FACTORcoord: 19..190
IPR027725Heat shock transcription factor familyPANTHERPTHR10015HEAT SHOCK TRANSCRIPTION FACTORcoord: 19..190
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 23..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig989contigA-nodosum_M_contig989:138532..145658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig989.4.1mRNA_A-nodosum_M_contig989.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig989 137943..145989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig989.4.1 ID=prot_A-nodosum_M_contig989.4.1|Name=mRNA_A-nodosum_M_contig989.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=616bp
MARRPEETDYGFPPARGGRGAPSMFPRKLYQILCETDPAVVGWDNDGESF
HIADMELFVESVMPMYYRHNKLTSFQRQLNLYGFKKRGRDEKHAGHYYHP
FFQRDHPEILGDVRRSYPTGSGNSKSEDDEAGSSTTSSTPHARATYSREL
SSSPGRPRTDSSPKRKAETPLPANSNKKAPPPQQQQQRQQRIRNTVGGAE
ARRENGGGRYVQHSYPYRPEYSGEQAREICREARGAPKKSPQRPWFYSGS
PAVSEAVIAARYKRPEDHRNVNTATDGSFLHGEEGWMSNGRGGAGGMGGG
IGRAGFMRTNTRPDLLGRHPYPYSAPNGRVWGPYREQEESGGAMWHDSEE
TGPSRMVSSDSACSPWGEMHPSVGGADSFERSRARAMVETDVRRSSYPPN
SSGGGGVGGGLGRPLGAHPLHRGVQTPAMFPAHFVRNERFGAFSDPHYPP
PPVFLPAHTTPDPDVPPPRKSSKWRPVYDGSRLNVGGDGGEDGVAGSSSW
SDPSRYARGVRMPGGRDGRKESTAFSAMHERAREGVGAGDAPRLQPGHGI
QSSSGSASSTYRAACEDFLRGEEVSESARPNGFRFGPPDAHVASASPTVK
GDAVSSRSIAMAATT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000232HSF_DNA-bd
IPR036388WH-like_DNA-bd_sf
IPR027725HSF_fam
IPR036390WH_DNA-bd_sf