prot_A-nodosum_M_contig9854.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9854.1.1
Unique Nameprot_A-nodosum_M_contig9854.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length48
Homology
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BLAST of mRNA_A-nodosum_M_contig9854.1.1 vs. uniprot
Match: A0A6H5KLB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLB3_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 6.410e-11
Identity = 28/47 (59.57%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:    1 GQLAHVYADLLNKLWKPTKETVAPVLFKKKLDKLNPFFAGCHQHDVQ 47
            G+LAHVYADL+N LW PTK+TV+P  FK ++ K N  F G  QHD Q
Sbjct: 1023 GRLAHVYADLVNDLWSPTKKTVSPKSFKNEIAKFNDLFGGHDQHDAQ 1069
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BLAST of mRNA_A-nodosum_M_contig9854.1.1 vs. uniprot
Match: UPI0018AF1BA0 (ubiquitin carboxyl-terminal hydrolase 9-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF1BA0)

HSP 1 Score: 48.1 bits (113), Expect = 4.500e-5
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    1 GQLAHVYADLLNKLWKPTKETVAPVLFKKKLDKLNPFFAGCHQHDVQ 47
            G+LA  + +LL KLW+  + +VAP  FK KL +  P F+G +QHD Q
Sbjct:  362 GELAIAFGELLRKLWRSGRSSVAPREFKGKLARFAPQFSGYNQHDSQ 408
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9854.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLB3_9PHAE6.410e-1159.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0018AF1BA04.500e-546.81ubiquitin carboxyl-terminal hydrolase 9-like n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 1..48
e-value: 2.0E-6
score: 28.9
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..47
e-value: 8.8E-7
score: 28.7
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9854contigA-nodosum_M_contig9854:6442..6585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9854.1.1mRNA_A-nodosum_M_contig9854.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9854 6442..6585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9854.1.1 ID=prot_A-nodosum_M_contig9854.1.1|Name=mRNA_A-nodosum_M_contig9854.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=48bp
GQLAHVYADLLNKLWKPTKETVAPVLFKKKLDKLNPFFAGCHQHDVQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR038765Papain-like_cys_pep_sf