prot_A-nodosum_M_contig983.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig983.23.1
Unique Nameprot_A-nodosum_M_contig983.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length52
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig983.23.1 vs. uniprot
Match: A0A6H5KIQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ0_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.320e-16
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0 
Query:    1 VDEAILSKIQQRYDSVHTRLISLYPDDPAKRAHIIRQMNLSVQLLRENGTKE 52
            +D+A L KIQQRYDSVH RL +LYPDDPAKR   IR+MNLSVQLLRE GTK+
Sbjct:  116 IDKATLDKIQQRYDSVHPRLEALYPDDPAKRNEYIREMNLSVQLLRERGTKD 167
[Close]
BLAST of mRNA_A-nodosum_M_contig983.23.1 vs. uniprot
Match: D7FYY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY8_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 9.280e-14
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0 
Query:    1 VDEAILSKIQQRYDSVHTRLISLYPDDPAKRAHIIRQMNLSVQLLRENGTKE 52
            V++  L KIQQRYDSV  RL +L+PDDPAKR+ I+R+MNLSV+LLRE GTK+
Sbjct:   65 VEQDTLVKIQQRYDSVVPRLEALFPDDPAKRSEIVREMNLSVELLRETGTKD 116
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig983.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KIQ0_9PHAE1.320e-1675.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYY8_ECTSI9.280e-1467.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig983contigA-nodosum_M_contig983:195913..196400 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig983.23.1mRNA_A-nodosum_M_contig983.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig983 195913..196402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig983.23.1 ID=prot_A-nodosum_M_contig983.23.1|Name=mRNA_A-nodosum_M_contig983.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=52bp
VDEAILSKIQQRYDSVHTRLISLYPDDPAKRAHIIRQMNLSVQLLRENGT
KE
back to top