Homology
BLAST of mRNA_A-nodosum_M_contig980.1.1 vs. uniprot
Match:
D8LCN7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN7_ECTSI)
HSP 1 Score: 91.3 bits (225), Expect = 1.730e-18
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 0
Query: 151 LAMC-ACDPCGGACDDFEECMQYEKNGMWYCSHIC-AEGACAEGEACKTKARSWCRFSGYDGCPMKRVC 217
+A C A + C GACDD +EC+QY +NG +YCS C + AC EGE C T+ R WCR SGYDGCP KR C
Sbjct: 217 VASCEATENCDGACDDTQECLQYARNGKYYCSDTCDSPAACEEGEECSTRPRKWCRSSGYDGCPEKRRC 285
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig980.1.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 1
20 40 60 80 100 120 140 160 180 200 Expect = 1.73e-18 / Id = 57.97 Sequence D8LCN7_ECTSI
Match Name E-value Identity Description
D8LCN7_ECTSI 1.730e-18 57.97 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
20 40 60 80 100 120 140 160 180 200 Expect = 2.0E-12 / Score = 49.0 Score = Sequence G3DSA:2.40.50.120 SSF50242
IPR Term IPR Description Source Source Term Source Description Alignment
IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold GENE3D 2.40.50.120 coord: 25..156 e-value: 2.0E-12 score: 49.0
IPR008993 Tissue inhibitor of metalloproteinases-like, OB-fold SUPERFAMILY 50242 TIMP-like coord: 25..205
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_A-nodosum_M_contig980.1.1 ID=prot_A-nodosum_M_contig980.1.1|Name=mRNA_A-nodosum_M_contig980.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=219bp MLFQSVILMALALVTIPMLDVAHGCSCQTRSDICDYYDEADVVLHATVLS RTDEPSVSSELTSSSPSGTKYYLVDTITLYKGEPDVTYPEQISFSTSINE GVCGVNPNIGEEYLFGLHRIVDPLDPMDGGELGVTLCDLFLEWGAEDEED LAMCACDPCGGACDDFEECMQYEKNGMWYCSHICAEGACAEGEACKTKAR SWCRFSGYDGCPMKRVCN* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR008993 TIMP-like_OB-fold