prot_A-nodosum_M_contig98.50.6 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig98.50.6
Unique Nameprot_A-nodosum_M_contig98.50.6
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1129
Homology
BLAST of mRNA_A-nodosum_M_contig98.50.6 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE)

HSP 1 Score: 545 bits (1403), Expect = 5.950e-172
Identity = 509/1196 (42.56%), Postives = 628/1196 (52.51%), Query Frame = 0
Query:    1 MTSRGGRGR-TGDKSKRFMIVGTKDALPTGSRSGVVAPVPINTPSLRQEIHGAKEDNSGIGSINRSSAGIGWGSAA-GSTSASAGNAPDNASTGGRGTRVNTG---GDDAFTRHFPDLRTGLEQAERLDAVTKASTKVAPLRKPKPEAA-NEGPSLRPRAMLKPTGSAGGGXXXXXXXXXXIAEAVHNRXXXXXXXXPKSEEFRRKSPSSAAEMSGSKSRWTERPPLQEGGGKGRDGGARXXXXXXXXXGAWETSSYRERGGGMGEM-HSRDRKGPRDSYQDKDFRKNFRQGSERIAGGSARVRESSFGSGAHHDSVNSGQDS--QGANVKPLATTYVRQHGPPPRRATAQAGVAQVQSPAQQQDQAQVTQQPTRSSAYSASTRPEPTSEAFEPPKSLSESSSNWRSSSSPSAQPTRSPVASAIKFSVSRSTQQAR-----GAGNEGQVGEQGDQEAPAQ--PYDAKEGETSRFERSWGASEHGRAVIDRNYSKGRERTLGEKSKEYTHDSRSPSSATSGRPANSQWKEVKDESRA-SRRWNGEEEHDVSSDRLEESV-EDGDVDSSCVVVPVAPAMAPSSPPQSSSWREAVDDGWGVDAVGNGR-DAELSA-ASITQHLEEQK-PLDTTATSVE--------NTMPLHKVEDTNGPVTLAEGDGSYENHTSVQGSLVVEEQLRQAQQAPQAGLRTTSWEPQLP--VGXXXXEPTGHGRDGLPDNAQGPGQMVSSGSSGASQPWSDPWGTSGFGLPSGGDQTSRAM-SFLSNGPTETQKGRYLPPALRNSAPAERNHVE--------HEAETNPSPLPQDVAPADVPNPDLVVIPGIS------SGSTGVGTTHLFEQQQQTHQKHQPPQXXXXXRPQXXXXXHGTQPQQQTQSLEEWRHGTTSATSHRVQERTESPADQPLHQQRQQQVIHQSHQVECAQSLHLGDQPHIDRNYRPSSSTAFSFQNPDRRQHPMQDSALHHQFQAEPFRGHPTYHSQDQTGRAPVPDHLQRPHFQPDDV----HHFNQLQIQQQPVHVSQHRAPHSLHQTXXXXXXXXXXXXXXXXXXXXXPQLPPGPLGGQVAHPRQQPQHHPQ--DMGRQTNQAQHLRLQPQQRQQQMPHPSSAFMMSSQGIGYSDPRATRGESGLGGLPVPMTGVYRD----------------VPQPGSYGFNSPDQHRKR 1128
            M +RGGRG   GDK+KR+M+VGTKDALP G+++GVVAPVPINTPSLRQEI G   +N+G  +INRS +G GWGSA   S SA++      AS  G+G R  +G   GDD FTRHFPDLR GLEQAE+LDAVTKAS+KVAPLRKPK E A ++GPSLRPRAMLKPTGSAGGG          IA+AVHNR        PK EE RR   S A E+S +KSRW ERP  QEGG + R  G           G WE +  R R  G G     R  +G RD++ +K+ R++FRQ S R A  S R RES FGSGAH    +S QDS  +G++  P +TTYVRQHGPPPR+A   A  A   +PA QQ+Q  V+QQPTRSSAYSAS +P       +P    +E+ S WRS+S  + QP       A     S S+Q        G G EGQ  E+ +    +    +DA    TSRF  SWGA E G+  +D++ S G ERT   + KE        S A    P N++WKE K+E RA +RRW   E+  +   R   S  ED D+D S      AP    S   Q+SSW+E+ DDGWGV    + R D+++SA AS ++ LE+Q+ PL+    SVE        +  P   + D              E+ TS  GS   ++Q           +  +SWEPQLP   G    E   +GRD      QGPGQ  +S S G+SQPWSDPWGTSGFGL + GDQ   ++ SFL N P E +K RYLPPALRN  P+  N  E         E +TN S L  DVA ADV   DLV+  G S       GS  +    L+EQ                      XXX           LEEW+     A S R Q    + A +P  Q +QQQ +HQSHQ   +Q LHL +  +++R Y+ + S  FS   P      MQD  LH QFQAE                     HL R  +Q D +     HFNQ+QI Q  +H  QH A       XXXXXX                            HP+QQ  H  Q  DM RQT+QAQ + +   Q   QM HPSSAFMM SQG+G +DPR  RG  GLGGLPV M   YRD                +  PG+YG  SP+ H KR
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDALPAGAKTGVVAPVPINTPSLRQEIQG---ENAGTAAINRSGSGGGWGSAVVSSASANSAAGQSVASGNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSVATAAAQAAIADAVHNRVATA----PKPEERRRPMASFADEIS-TKSRWAERP-FQEGGSRVRGAGR-------GTGGTWEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSATP-STTYVRQHGPPPRKA---ATPATTPAPAVQQEQPLVSQQPTRSSAYSAS-KPSNDQSHGDPWGKSAETLSKWRSASPSNPQPAMDAPPEAPPMPDSPSSQSGSYVRGDGPGREGQADERVETSVSSSRSDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAG-----SLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAGEDADIDDSSA----APPTMASPTSQNSSWKESADDGWGVKVPKHDRGDSDMSATASTSEKLEQQEQPLEGGGGSVEVGAGADVSSEKPAEGL-DAXXXXXXXXXXIPSEDTTSFGGSFAQQQQAHPV-------ISKSSWEPQLPRGAGGDLWETPANGRDHHTQQ-QGPGQAGASTSGGSSQPWSDPWGTSGFGLSASGDQRPGSIASFLDNAPEEPRKDRYLPPALRNRNPSHENEEEAANIPLADQEIDTNRSSL-SDVASADVSAQDLVLSGGGSMRTDSPDGSCAMKAP-LYEQ----------------------XXXXXXXXXXXXVPLEEWQQEGAQA-SRRSQHNQTAHAVEP--QLQQQQPVHQSHQP-ASQPLHLHEHANLNRGYQRNPSEGFSSFQPQ-----MQDPGLH-QFQAEHXXXXXXXXXXXXXXXXXPEQHLPRHQYQSDHLPVQRQHFNQVQIPQH-MHPPQHSAXXXXXXXXXXXXX----------------------XXXHQGHPQQQVYHQGQQLDMSRQTSQAQQMHMH--QHHLQMQHPSSAFMMPSQGMG-TDPRGARGV-GLGGLPVQMAAPYRDEQXXXXXXXXSQHQAGMSAPGAYGVQSPETHHKR 1096          
BLAST of mRNA_A-nodosum_M_contig98.50.6 vs. uniprot
Match: D8LK50_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK50_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 2.290e-100
Identity = 277/571 (48.51%), Postives = 342/571 (59.89%), Query Frame = 0
Query:    1 MTSRGGRGR-TGDKSKRFMIVGTKDALPTGSRSGVVAPVPINTPSLRQEIHGAKEDNSGIGSINRSSAGIGWGSA-AGSTSASAGNAPDNASTGGRGTRVNTG---GDDAFTRHFPDLRTGLEQAERLDAVTKASTKVAPLRKPKPEAA-NEGPSLRPRAMLKPTGSAGGGXXXXXXXXXXIAEAVHNRXXXXXXXXPKSEEFRRKSPSSAAEMSGSKSRWTERPPLQEGGGKGRDGGARXXXXXXXXXGAWETSSYRERGGGMGEM-HSRDRKGPRDSYQDKDFRKNFRQGSERIAGGSARVRESSFGSGAHHDSVNSGQDS--QGANVKPLATTYVRQHGPPPRRATAQAGVAQVQSPAQQQDQAQVTQQPTRSSAYSASTRPEPTSEAFEPPKSLSESSSNWRSSSSPSAQPTRSPVASAIKFSVSRSTQQA---------RGAGNEGQVGEQGDQE-APAQP-YDAKEGETSRFERSWGASEHGRAVIDRNYSKGRERTLGEKSKEYTHDSRSPSSATSGRPANSQWKEVKDESRA-SRRWNGEEEHDVSSDRLEESVE-DGDVDSS 549
            M +RGGRG   GDK+KR+M+VGTKDA+P G+++GVVAPVPINTPSLRQEI G   DN+G  +INRS +G GWGSA A S SA++              R  +G   GDD FTRHFPDLR GLEQAE+LDAVTKAS+KVAPLRKPK E A ++GPSLRPRAMLKPTGSAGGG          IA+AVHNR        PK EE RR   S A E+S +KSRW ERP LQEGG +GR  G           G WE +  R R  G G     R  +G RD++ +K+ R++FRQ S R A  S R RES FGSGAH    +S QDS  +G++  P +TTYVRQHGPPPR+    A  A   +PA QQ+Q  V+QQPTRSSAYSAS +P       +P     E+ S WRS+S  + QP       A +   S S+Q           R +G EGQ  E+G+   + ++P +DA    TSRF  SWGA E G+  +D++ S G ERT   + KE        S A    P N++WKE K+E RA +RRW   E+  +   R   S E D D+D S
Sbjct:    1 MAARGGRGGWAGDKTKRYMMVGTKDAVPAGAKTGVVAPVPINTPSLRQEIQG---DNAGTAAINRSGSGGGWGSAVASSASANSAAGQXXXXXXXXXRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDAVTKASSKVAPLRKPKSEPAKDQGPSLRPRAMLKPTGSAGGGSAATAAAQAAIADAVHNRVATA----PKPEERRRPMASFADEIS-TKSRWAERP-LQEGGSRGRGAGR-------GTGGTWEMNKERGRDSGQGGRGFERAERGRRDAFPEKEDRRSFRQNSNRSAMNSTRGRESIFGSGAHVGVASSTQDSTSKGSSKTP-STTYVRQHGPPPRKV---ATPATTPAPAAQQEQPLVSQQPTRSSAYSAS-KPSNDQSHGDPWGKSVETPSKWRSASPSNPQPAMDAPPEAPQMPDSPSSQSGSYVRAHGPPRRSGREGQADERGETSISSSRPDHDAGGEPTSRFGGSWGAPEQGQNAMDKDSSAGIERTQSGRWKEPAG-----SLAPPPHPTNTRWKEPKEEPRAGARRWKAREDGQMGGGRWGRSAEEDADIDDS 545          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig98.50.6 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJY1_9PHAE5.950e-17242.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK50_ECTSI2.290e-10048.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 697..717
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1000..1026
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 495..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..1128
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1044..1086
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 510..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..284
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 452..494
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 636..674
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 799..895
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 976..991
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 107..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 907..927
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 724..746
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..378
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig98contigA-nodosum_M_contig98:594830..611424 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig98.50.6mRNA_A-nodosum_M_contig98.50.6Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig98 594133..611487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig98.50.6 ID=prot_A-nodosum_M_contig98.50.6|Name=mRNA_A-nodosum_M_contig98.50.6|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1129bp
MTSRGGRGRTGDKSKRFMIVGTKDALPTGSRSGVVAPVPINTPSLRQEIH
GAKEDNSGIGSINRSSAGIGWGSAAGSTSASAGNAPDNASTGGRGTRVNT
GGDDAFTRHFPDLRTGLEQAERLDAVTKASTKVAPLRKPKPEAANEGPSL
RPRAMLKPTGSAGGGSAATAAAQAAIAEAVHNRSASASASAPKSEEFRRK
SPSSAAEMSGSKSRWTERPPLQEGGGKGRDGGARGGAGGRGGGGAWETSS
YRERGGGMGEMHSRDRKGPRDSYQDKDFRKNFRQGSERIAGGSARVRESS
FGSGAHHDSVNSGQDSQGANVKPLATTYVRQHGPPPRRATAQAGVAQVQS
PAQQQDQAQVTQQPTRSSAYSASTRPEPTSEAFEPPKSLSESSSNWRSSS
SPSAQPTRSPVASAIKFSVSRSTQQARGAGNEGQVGEQGDQEAPAQPYDA
KEGETSRFERSWGASEHGRAVIDRNYSKGRERTLGEKSKEYTHDSRSPSS
ATSGRPANSQWKEVKDESRASRRWNGEEEHDVSSDRLEESVEDGDVDSSC
VVVPVAPAMAPSSPPQSSSWREAVDDGWGVDAVGNGRDAELSAASITQHL
EEQKPLDTTATSVENTMPLHKVEDTNGPVTLAEGDGSYENHTSVQGSLVV
EEQLRQAQQAPQAGLRTTSWEPQLPVGTELWEPTGHGRDGLPDNAQGPGQ
MVSSGSSGASQPWSDPWGTSGFGLPSGGDQTSRAMSFLSNGPTETQKGRY
LPPALRNSAPAERNHVEHEAETNPSPLPQDVAPADVPNPDLVVIPGISSG
STGVGTTHLFEQQQQTHQKHQPPQQQQEQRPQHQPQQHGTQPQQQTQSLE
EWRHGTTSATSHRVQERTESPADQPLHQQRQQQVIHQSHQVECAQSLHLG
DQPHIDRNYRPSSSTAFSFQNPDRRQHPMQDSALHHQFQAEPFRGHPTYH
SQDQTGRAPVPDHLQRPHFQPDDVHHFNQLQIQQQPVHVSQHRAPHSLHQ
THHQQSQQQQGHHQQGYQQGQQPQLPPGPLGGQVAHPRQQPQHHPQDMGR
QTNQAQHLRLQPQQRQQQMPHPSSAFMMSSQGIGYSDPRATRGESGLGGL
PVPMTGVYRDVPQPGSYGFNSPDQHRKR*
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