prot_A-nodosum_M_contig974.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig974.8.1
Unique Nameprot_A-nodosum_M_contig974.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length199
Homology
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: D7FNV2_ECTSI (Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNV2_ECTSI)

HSP 1 Score: 379 bits (974), Expect = 7.810e-133
Identity = 192/198 (96.97%), Postives = 194/198 (97.98%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTG PRGGTR+T STQV G+GSG GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGAPRGGTRLTASTQVSGAGSGGGCC 203          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A836CKR4_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKR4_9STRA)

HSP 1 Score: 344 bits (883), Expect = 5.800e-119
Identity = 171/198 (86.36%), Postives = 183/198 (92.42%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD++SF NVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAK FAD+LGIEFLETSAKNA+NV+ AFM M++ IK RMK+QPT   +GGT++TPS QV G  +  GCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDSFQNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKEFADSLGIEFLETSAKNATNVDSAFMTMSAAIKGRMKTQPTAGAKGGTKLTPSAQVSGGATSGGCC 203          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A835YQS3_9STRA (Ras related protein PiYpt1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS3_9STRA)

HSP 1 Score: 338 bits (866), Expect = 2.340e-116
Identity = 169/199 (84.92%), Postives = 182/199 (91.46%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSG-SGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRT+ELD KT+KLQIWDTAGQERFRTIT+SYYRGAHGIIVVYDVTD+ESFNNVKQWL EI+RYACENVNKLLVGNKSDLEAKRAVTTEE K FAD++GIEFLETSAKNA NVEKAF+MM+ QIK RMK+ P G  +GGTR+T   QV G G+G SGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKTVKLQIWDTAGQERFRTITASYYRGAHGIIVVYDVTDRESFNNVKQWLTEIERYACENVNKLLVGNKSDLEAKRAVTTEEGKEFADSIGIEFLETSAKNADNVEKAFLMMSQQIKGRMKTAPAGGAKGGTRLTAGEQVGGGGAGGSGCC 204          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: W7TST3_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST3_9STRA)

HSP 1 Score: 337 bits (864), Expect = 4.560e-116
Identity = 169/198 (85.35%), Postives = 182/198 (91.92%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEL+ KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEI+RYA ENVNKLLVGNKSDLE KR V+TE AK FAD+LGI FLETSAKN++NVEKAF+ MASQIK+RMK+QP GP  GGT++T ST V G G+ SGCC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEINRYASENVNKLLVGNKSDLEPKRVVSTETAKEFADSLGIAFLETSAKNSTNVEKAFLTMASQIKARMKTQPVGPKTGGTKLTASTAVGGPGASSGCC 203          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycota TaxID=4762 RepID=YPT1_PHYIN)

HSP 1 Score: 330 bits (847), Expect = 1.660e-113
Identity = 168/198 (84.85%), Postives = 180/198 (90.91%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  P + G ++TP  QVP +G GS CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAP-KAGVKLTPGQQVPSNG-GSKCC 201          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A140YWP8_PHYNI (Ras-related protein (Fragment) n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A140YWP8_PHYNI)

HSP 1 Score: 326 bits (835), Expect = 9.040e-112
Identity = 166/197 (84.26%), Postives = 179/197 (90.86%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGC 197
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSA+NA+NVEKAFMMMA+QIK RM + P  P + G ++TP  QVP +G GS C
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSARNAANVEKAFMMMAAQIKKRMANAPVAP-KAGVKLTPGQQVPSNG-GSKC 195          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A140YWQ0_PHYNI (Ras-related protein (Fragment) n=4 Tax=Phytophthora TaxID=4783 RepID=A0A140YWQ0_PHYNI)

HSP 1 Score: 325 bits (832), Expect = 2.590e-111
Identity = 166/197 (84.26%), Postives = 178/197 (90.36%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGC 197
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ A+ FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  P R G ++TP   VP +G GS C
Sbjct:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAQEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAP-RAGVKLTPGQHVPSNG-GSKC 195          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A024FYE8_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYE8_9STRA)

HSP 1 Score: 324 bits (831), Expect = 4.700e-111
Identity = 168/198 (84.85%), Postives = 176/198 (88.89%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR VTTE    FAD LGIEFLETSAKNA+NVE+AFM MASQIK RM + PT P +   +I+P  Q+P S SGS CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLVAKRVVTTETGAQFADELGIEFLETSAKNAANVEEAFMKMASQIKKRMANAPTAPKQS-IKISPGQQLP-SNSGSKCC 201          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: A0A6A3UIH2_9STRA (Ras-like GTP-binding protein n=90 Tax=Phytophthora TaxID=4783 RepID=A0A6A3UIH2_9STRA)

HSP 1 Score: 326 bits (835), Expect = 1.260e-110
Identity = 164/192 (85.42%), Postives = 176/192 (91.67%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSG 192
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+T+ AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + P  P + G ++TP  QVP +G
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPVAP-KAGVKLTPGQQVPSNG 196          
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Match: K3W769_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3W769_GLOUD)

HSP 1 Score: 320 bits (821), Expect = 1.510e-109
Identity = 165/198 (83.33%), Postives = 176/198 (88.89%), Query Frame = 0
Query:    1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC 198
            DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELD KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD+ESFNNVKQWLHEIDRYACENVNKLLVGNKSDL AKR V+TE AK FA++LGIEFLETSAKNA+NVEKAFMMMA+QIK RM + PT P +   ++   T V  +G G  CC
Sbjct:    6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTEAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMANAPTAP-KPTLKLNQGTNVQQNGGGK-CC 201          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig974.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNV2_ECTSI7.810e-13396.97Rab1B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A836CKR4_9STRA5.800e-11986.36Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
A0A835YQS3_9STRA2.340e-11684.92Ras related protein PiYpt1 n=1 Tax=Tribonema minus... [more]
W7TST3_9STRA4.560e-11685.35Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=42... [more]
YPT1_PHYIN1.660e-11384.85Ras-like GTP-binding protein YPT1 n=22 Tax=Oomycot... [more]
A0A140YWP8_PHYNI9.040e-11284.26Ras-related protein (Fragment) n=4 Tax=Peronospora... [more]
A0A140YWQ0_PHYNI2.590e-11184.26Ras-related protein (Fragment) n=4 Tax=Phytophthor... [more]
A0A024FYE8_9STRA4.700e-11184.85Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A6A3UIH2_9STRA1.260e-11085.42Ras-like GTP-binding protein n=90 Tax=Phytophthora... [more]
K3W769_GLOUD1.510e-10983.33Uncharacterized protein n=4 Tax=Oomycota TaxID=476... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 27..43
score: 35.4
coord: 142..164
score: 43.84
coord: 107..120
score: 55.32
coord: 45..67
score: 56.42
coord: 4..25
score: 56.84
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..167
e-value: 1.2E-36
score: 137.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 9..196
e-value: 6.7E-6
score: 34.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 4..167
e-value: 1.2E-108
score: 377.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..168
e-value: 0.0068
score: -2.2
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 8..157
e-value: 0.001
score: 15.8
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 8..157
e-value: 0.001
score: 15.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 165..198
NoneNo IPR availablePANTHERPTHR47977:SF6RAS-RELATED PROTEIN RABD2A-LIKEcoord: 1..187
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 1..187
NoneNo IPR availablePROSITEPS51419RABcoord: 1..198
score: 38.906857
NoneNo IPR availablePROSITEPS51417ARFcoord: 1..164
score: 9.451832
NoneNo IPR availablePROSITEPS51420RHOcoord: 1..166
score: 11.190445
NoneNo IPR availableCDDcd01869Rab1_Ypt1coord: 2..167
e-value: 2.09795E-127
score: 353.557
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 6..167
e-value: 1.6E-14
score: 64.2
IPR001806Small GTPasePFAMPF00071Rascoord: 5..165
e-value: 3.4E-67
score: 225.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..198
score: 20.995438
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 2..160
e-value: 1.4E-34
score: 117.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..187
e-value: 4.1E-76
score: 256.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig974contigA-nodosum_M_contig974:81721..84450 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig974.8.1mRNA_A-nodosum_M_contig974.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig974 81721..84450 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig974.8.1 ID=prot_A-nodosum_M_contig974.8.1|Name=mRNA_A-nodosum_M_contig974.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=199bp
DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSK
TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHE
IDRYACENVNKLLVGNKSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNA
SNVEKAFMMMASQIKSRMKSQPTGPPRGGTRITPSTQVPGSGSGSGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase