prot_A-nodosum_M_contig971.12.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig971.12.2
Unique Nameprot_A-nodosum_M_contig971.12.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1072
Homology
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Match: D8LKX6_ECTSI (Similar to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 4.010e-77
Identity = 226/708 (31.92%), Postives = 307/708 (43.36%), Query Frame = 0
Query:   51 SKKHRSSEDAYMLIYVREGVAWGLGSEGDDDCPLPAHVREAVEAANVALATKVSRFREATQGKRRLETQMQRRRDQYCRLFGPPIKTAP-AGRKGTTYSDYMGIL--PQKALGI-----------------VLRHPGPSDEQLSTDAAAVEARDLATATAASSAGAKAADVFAEGKASSASLPPCEYFWVDSHWLEQWVIGKSLPPGEAAQLSTDAAAVEARDLAMATAASLAGAKAADVFAEEKASSASLPPGEYFWVNSHWLEQWVIGKSLP--------------------------PPGEAAVVDPVVAVVDGANREAESAKEEVRV------------------------TKRLKGGVSGENKGVA-EVNFNGVGNGDAGGPVDAPAFRGGADDQRASDTL----------VFAEPMRNLGLVCDHGALHPASVSRWKLVTREVYEGLLGEDGVGPPDHHLSAANFRCEHCVREHISRKESNIMASRESGLLVAELEKAEPAWDRKIRDSYKGEE---------DPGSDEKRPFAISRKWISDFKLHHEQFLRSTAKDATGQAKGGGCV------------------SGRAKAPLKPPDERVNTSITCDHGNLVSDGGPRKKYRWISAEGWDMVRRRFPLASELEYPAGTRPCSICQEQEEGETQLKLDRRKSKAAELQKGRSLRNVLKRDGAFPPKLYANHR 650
            +KK R SEDAYMLIYV+ GVAWG  S   D   LP  V  AV+A+N  L   V R+      K  L+  MQ RR+ Y R+FGPP+K AP AGRKG        I+   +   G+                      G   E+     AA  AR  + A + ++                                                   D A   A  LA +  A+           +E+    ++P  E+FWV + WL QW++G+                               GEA          DG   +                                      +G    +   V    + +GV      G V     R   DD +    L          VF E + N+ L+C HG LHPASVS++KLVTR  YEG+L    +  PD+HLSA+N+ C  CV++HI +KESN+  SRESG L+AELEK EP+W    +   +G             G+  + PFAISRKW++D K+ H+QFLR+  K ++                            G     ++ PD RVN +ITC+HGNLV     R+KYRWIS  GW+MV+  FPLA E+EYPAGT+PCS C+EQ++ E +LKLD R++K+AEL  G SL+ + KR  A PP+L A+ R
Sbjct:  946 AKKPRGSEDAYMLIYVKRGVAWGPSSAERDAEKLPEDVLAAVQASNETLLANVDRY---DCEKLVLDGDMQDRRELYARIFGPPLKPAPPAGRKGKGKGPAQAIVIDQENNAGVGXXXXXXXXXXXXXXXXXXADDGKGHEEPGDGPAAKRARRRSRADSCTADEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDFAQAVAASLAQSPTAAXXXXXXXXXXGQEELPG-NIPESEFFWVEAEWLRQWIVGQRADHNASEGGEAGXXXXXXXXXXXXXXXXXEGEAXXXXXXXDAGDGPEPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXEGNPGSDESSVCFSHDADGVE-----GDVAGTTCRIATDDNKEQVLLTEEVEEETPCVFTERLTNVPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPRPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGQLLAELEKPEPSWPPPQQXXXEGTRAARGRXXXRGSGASPQVPFAISRKWVADLKVCHDQFLRNAGKSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXGGEPVGAMRLPDGRVNQNITCEHGNLVGGKSGRRKYRWISPRGWEMVKNLFPLAEEVEYPAGTQPCSQCEEQDKDEMKLKLDLRQAKSAELVTGPSLKGLWKRSDALPPRLLAHSR 1644          
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Match: A0A6H5L6A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 7.670e-60
Identity = 237/785 (30.19%), Postives = 311/785 (39.62%), Query Frame = 0
Query:   52 KKHRSSEDAYMLIYVREGVAWGLGSEGDDDCPLPAHVREAVEAANVALATKVSRFREATQGKRRLETQMQRRRDQYCRLFGPPIKTAP-AGRKGTTYSDYMGILPQKA----------------------------------------------------------------------LGIV-LRHPGPSDEQLSTDAAAVEAR-----------------------------DLATATAASSAGAKAADVFAEGKASS-------ASLPPCEYFWVDSHWLEQWVIGKSLPP-GEAAQLST----------------------------------------------DAAAVEARDLAMATAASLAGAKAADVFAEEKASSASLPPGEYFWVNSHWLEQWVIGKSLPPPGEAAVVDPVVAVVDGANREAESAKEEVRVTKRLKGGV-SGENKGVAEVNFNGVGNGDAGG---PVDAPAFRGG------------ADDQRASDTLVFAEPMRNLGLVCDHGALHPASVSRWKLVTREVYEGLLGEDGVGPPDHHLSAANFRCEHCVREHISRKESNIMASRESGLLVAELEKAEPAWD---------RKIRDSYKGEEDPGSDEKRPFAISRKWISDFKLHHEQFLRSTAKDATGQAKGGGCV------------------SGRAKAPLKPPDERVNTSITCDHGNLVSDGGPRKKYRWISAEGWDMVRRRFPLASELEYPAGTRPCSICQEQEEGET-------QLKLDR--RKSKAAELQKGR 629
            KK R SEDAYMLIYV+ GVAWG  S   D   LP  V  AV+A+N AL   V R+    + K  L+  MQ RR+ Y R+FGPP+K AP AGRKG        I+  +                                                                       +G+V   HP PSDE+L    A                                  D A A                             ++P  ++FWV++ WL QW++G+     GE+A                                                  +   VE    A     +  GA AAD   E +A            V +H         S   P E A   PV     G   E E A E+       +G   S EN G    + +GV  GD      PV      G              ++       VF + + NL L+C HG LHPASVS++KLVTR  YEG+L    +  PD+HLSA+N+ C  CV++HI +KESN+  SRESG L+AELEK EP+W                       G+  + PFAISRKW++D K+ H+QFLR+  K  +                            G     ++ PD RVN +ITC+HGNLV  GG  +KYRWIS  GW+MV+  FPLA E+EYPAGT+PCS C+EQ  G T       ++KL R  R++K+AEL  G+
Sbjct:  386 KKPRGSEDAYMLIYVKRGVAWGPSSAERDAEKLPEDVLAAVKASNEALLANVDRY---DREKLLLDRHMQDRRELYARIFGPPLKPAPPAGRKGKGKGPAQAIVINEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVGVVPYVHPSPSDEELEESDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYAQAVXXXXXXXXXXXXXXXXXXXXXXXXXPPGNIPESKFFWVETEWLRQWIVGQHADQDGESAXXXXXXXXXXXXXXXXXXXXXXXXXXPLVLDGVXXXXXXXXXXXXXXXXXEMMEVEETTKAAGEGEASDGAGAADAGDEPEARECDGAA-----VAAH--------SSRGDPEEEATGGPVPR---GEEEEEEGAPEQ-------EGNPGSDENSGCLGHDADGV-EGDVARTTCPVATCDNNGNLEVYSQGEEVLLTEEVEEETPCVFTKRLSNLPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPLPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSWPPPXXXXXXXXXXXXXXXXXXXXGASPQVPFAISRKWVADLKVCHDQFLRNAGKSPSNSQGSXXXXXXXXXXXXXXXXXXXXXXGGEPVGAMRLPDGRVNQNITCEHGNLV--GG--RKYRWISPRGWEMVKSLFPLAQEVEYPAGTQPCSQCEEQVVGATTKEQDKDEMKLKRGLRQAKSAELVTGK 1139          
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Match: A0A6H5L395_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L395_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 1.410e-40
Identity = 130/361 (36.01%), Postives = 164/361 (45.43%), Query Frame = 0
Query:  730 VSEEGAAAEAEVLTEAEWTDLARCSYIVQAGKGGGSTGSSPCVGEKRKIDEISQSCRGGEVGTPDSRPSSPSSVAEEGAGASCTLEVSFDPRSGWSPGVCEVCMAAAGERANLARSVFKGKVVNVVRLKEGESPPAPDPAKASEGEVHLSASGRPQRRTRAKGAQPLAVTSSSDETVNFFKLKIYQFVEVPPRRQKLFLRASPVGEGTATLQQAGVKAGDTLHLEVKNPSASDAADDAALDDAQLFADGFVTRSPPGPERGFAGTALSASRIVLPPCILRPPPSTSS-----------STLGVTPAVEVLEVEGGYLEVP---------GQSPPPFVACPTCIFHNRLTEERCSACRVALF 1070
            +S+E    EAEV+TEAEW DL R         GG                                      SV E   G   +     +   GW P VCE C  AA ERA L++ VF+GK V V+RLK+GE  P  D A A       S++GR +R TR +GA P  +T SSD+TV+ FKL+++  +EV P RQ L+LR + +  G +TLQ A VKAGDTLHL+V  PS      D   DD Q+F DG +T+ P GPE GF GTAL                               +T+ V    E+   E   L V          G S   F+AC  C   N+LT ERC  C   LF
Sbjct:    1 MSDEDGVPEAEVITEAEWLDLHRVD-------GGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLERTFGVRYSPGEEEEEGGGWFPRVCEECTKAAAERAELSKVVFEGKQVKVIRLKDGEQAPTGDGAAAQ-----FSSTGRLKRNTRGRGAAPFEITCSSDDTVSHFKLQVFASIEVAPARQVLYLRGTEL-TGGSTLQAANVKAGDTLHLKVTEPSG-----DVDEDDGQIFLDG-LTKPPSGPETGFQGTALMGXXXXXXXXXXXXXXXXXXXAFLSAVGGXXATVTVDVEAEIAAAEAASLAVDDWKENGDNDGASEG-FMACSKCTLRNKLTAERCLTCNEPLF 341          
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Match: A0A6S8CNX3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8CNX3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.400e-13
Identity = 156/668 (23.35%), Postives = 253/668 (37.87%), Query Frame = 0
Query:  385 LVFAEPMRNLGLVCDHG--ALHPASVSRWKLVTREVYEGLLGEDGVGPPDHHLSA---ANFRCEHCVREHISRKESNIMASRESGLLVAELEKAEPAWDRKIRDSYKGEEDPGSDEKRPFAISRKWISD----FKLHHEQFLRSTAKDATGQAKGGGCVSGRAKAPLKPPD-----ERVNTSITCDHGNLVSDGGPRKKYRWISAEGWDMVRRRF---PLASELEYPAGTRPCSICQEQEEGETQLKLDRRKSKAAELQK---GRSLRNVLKRDGAFPPKLYANHRRRADRQVICVDDKPAAADGRLFLAEARWLAAWRAHHSSSV--HSEPPGRL---LNQGLRCEHGLAIMGQRLRRVVEG-----HLPAMAGVSEEGAAA-EAEVLTEAEWTDLARCSYIVQAGKGGGSTGSSP-CVGEKRKIDEISQSCRGGEVGTPDSRPSSPSSVAEEGAGASCTLEVSFDPRSGWSPGVCEVCMAAAGERANLARSVFKGKVVNVVRLKEGESPPAPDPAKASEGEVHLSASGRPQRRTRAKGAQP----LAVTSSSDETVNFFKLKIYQFV--------------EVPPRRQKLFLRASPVGEGTATLQ-QAGVKAGDTLHLEVKNPSA-----SDAADDAALDDAQLFADGFVTRSPPGPERGFAGTAL 996
            L+F +P+R    VC HG   + P +VS+ K +    +  L+   G   PD  LS+       C  C++E +  +ES      E    V ++          I  + K  ED  S       ISRKW+++    FK H  +      +  T   K            LKP       E +N  I C HGNL    G + K RWI  + W+ +R         +   +  G+  C  C+ +     +L    R+++  +L+    G ++R ++KR    P   Y  +R +A               G  F+    W+ AWR   +  V  H   P  +   +N+ L C H    +  RL R ++       L   A   E+G    E E+L+E EW  +        AGK      ++  C  E             G+       P + +              + F P       +C  CMA   E+    +  ++ K+ +V+R+  G +      A+ S G          +R  R KG Q       +T+SSD+T+ F +LKI+Q +              E+ P   ++    S V     TL  Q  +  GD ++ +    SA     S   ++ ++++   FA    T+     E GF+GTAL
Sbjct:   10 LLFIKPIRLKQYVCPHGNGKIAPETVSKLKRINARTWYELIKLSG--EPDITLSSLQNGGVDCAQCIQE-LKHRESKKRLEEEVWSTVNDI---------LILSNQKYAEDKNS-----ALISRKWVTNWKALFKQHETRRKNEKQRSHTPNTK------------LKPKVGEGSMENINDDIICSHGNLRP--GKQGK-RWIPLDHWNYIRENALGGKCKNSRTFKFGSVVCQACERELSHAKELAKIHRETRDEQLKSKEYGSTIRKLMKRVCGHPDISYDTNRLKA---------------GIYFVVPRSWMFAWRIFMNGDVLGHVNAPNSIEKHVNEMLLCPHNRVQVYPRLLRWLQDDTRRVRLLENADCIEKGFNDDECEILSEREWIAMNH----FYAGKSFTELETNRNCKDESTSAGIYFLLHNDGDDNIDIDAPKAKNDNM---------FSIQFHPE------LCIDCMAKRREKHIQEKKNYRDKIFDVIRVTSGVT------AEMSNGS---------RRSNRQKGGQNNKQRFTITASSDDTIEFVRLKIFQALVGFDEKRRKTGEDMELSPGSIRILKEESYVPLNGQTLMIQNDILLGDIIYFDTNGASANGTNISTTNENMSIEELTAFASSQNTQ-----EIGFSGTAL 591          
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Match: A0A7S1Y0X0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0X0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 8.480e-7
Identity = 45/121 (37.19%), Postives = 62/121 (51.24%), Query Frame = 0
Query:  885 QRRTRAKGAQPLAVTSSSDETVNFFKLKIYQFV---EVPPRRQKLFLRASPVGEGTATLQQAGVKAGDTLHLEVKNPSASDAADDA----ALDDAQLFADGFVTRSPPGPERGFAGTALSA 998
            QRR R +GA+P+ V SS D++V   KLKI+Q +      P  Q L++    +    ATL+ AGV+A  T++L V   +A  AADD      + DAQ  A           E GF GT L +
Sbjct:    1 QRRGRGRGAKPMLVVSSCDDSVMQLKLKIWQELGDDASAPNAQLLYVGGRLLDNDAATLRDAGVRADATVYLRVLEGAAGGAADDGLWWTVMGDAQQAAVA---------ELGFQGTFLQS 112          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig971.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LKX6_ECTSI4.010e-7731.92Similar to ubiquitin specific protease 48 n=1 Tax=... [more]
A0A6H5L6A7_9PHAE7.670e-6030.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L395_9PHAE1.410e-4036.01Ubiquitin-like domain-containing protein n=2 Tax=E... [more]
A0A6S8CNX3_9STRA3.400e-1323.35Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S1Y0X0_9STRA8.480e-737.19Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 319..339
NoneNo IPR availableGENE3D3.10.20.90coord: 891..968
e-value: 1.1E-7
score: 33.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 782..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..893
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 898..956
e-value: 2.2E-6
score: 27.3
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 876..960
score: 10.658268
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 894..960

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig971contigA-nodosum_M_contig971:80004..101428 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig971.12.2mRNA_A-nodosum_M_contig971.12.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig971 73638..101428 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig971.12.2 ID=prot_A-nodosum_M_contig971.12.2|Name=mRNA_A-nodosum_M_contig971.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1072bp
MKTASNISNGAGVTITSRNGGTDAVAAGVENEGMGGAAGDDGSGSGGSAG
SKKHRSSEDAYMLIYVREGVAWGLGSEGDDDCPLPAHVREAVEAANVALA
TKVSRFREATQGKRRLETQMQRRRDQYCRLFGPPIKTAPAGRKGTTYSDY
MGILPQKALGIVLRHPGPSDEQLSTDAAAVEARDLATATAASSAGAKAAD
VFAEGKASSASLPPCEYFWVDSHWLEQWVIGKSLPPGEAAQLSTDAAAVE
ARDLAMATAASLAGAKAADVFAEEKASSASLPPGEYFWVNSHWLEQWVIG
KSLPPPGEAAVVDPVVAVVDGANREAESAKEEVRVTKRLKGGVSGENKGV
AEVNFNGVGNGDAGGPVDAPAFRGGADDQRASDTLVFAEPMRNLGLVCDH
GALHPASVSRWKLVTREVYEGLLGEDGVGPPDHHLSAANFRCEHCVREHI
SRKESNIMASRESGLLVAELEKAEPAWDRKIRDSYKGEEDPGSDEKRPFA
ISRKWISDFKLHHEQFLRSTAKDATGQAKGGGCVSGRAKAPLKPPDERVN
TSITCDHGNLVSDGGPRKKYRWISAEGWDMVRRRFPLASELEYPAGTRPC
SICQEQEEGETQLKLDRRKSKAAELQKGRSLRNVLKRDGAFPPKLYANHR
RRADRQVICVDDKPAAADGRLFLAEARWLAAWRAHHSSSVHSEPPGRLLN
QGLRCEHGLAIMGQRLRRVVEGHLPAMAGVSEEGAAAEAEVLTEAEWTDL
ARCSYIVQAGKGGGSTGSSPCVGEKRKIDEISQSCRGGEVGTPDSRPSSP
SSVAEEGAGASCTLEVSFDPRSGWSPGVCEVCMAAAGERANLARSVFKGK
VVNVVRLKEGESPPAPDPAKASEGEVHLSASGRPQRRTRAKGAQPLAVTS
SSDETVNFFKLKIYQFVEVPPRRQKLFLRASPVGEGTATLQQAGVKAGDT
LHLEVKNPSASDAADDAALDDAQLFADGFVTRSPPGPERGFAGTALSASR
IVLPPCILRPPPSTSSSTLGVTPAVEVLEVEGGYLEVPGQSPPPFVACPT
CIFHNRLTEERCSACRVALFE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR029071Ubiquitin-like_domsf