prot_A-nodosum_M_contig97.64.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: D7G5S1_ECTSI (Putaive LSm10 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5S1_ECTSI) HSP 1 Score: 152 bits (384), Expect = 5.070e-45 Identity = 86/138 (62.32%), Postives = 97/138 (70.29%), Query Frame = 0
Query: 7 GSRPSAASRRTNPLERTLAILIQSMRGNRVVVEMKNDVEISGILEETDGNM---------------------NLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSK 123
G+RP ++T+PLE+TLAILIQSMRGN++VVEMKND EISGILEETD NM +LSMVDVR T+ GSV+KMDV LVQGKMIRYVHIPDKVDAISNL HMR M + Y RNMLK K
Sbjct: 6 GNRPQPRQKKTSPLEKTLAILIQSMRGNKIVVEMKNDAEISGILEETDRNMKAATVWLAAYGLTCSRAGPAPSLSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQ--GYHRNMLKPK 141
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A6H5JYY5_9PHAE (Sm domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY5_9PHAE) HSP 1 Score: 126 bits (317), Expect = 1.310e-35 Identity = 67/86 (77.91%), Postives = 71/86 (82.56%), Query Frame = 0
Query: 40 MKNDVEISGILEETDGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSKTT 125
MKND EISGILEETD NMNLSMVDVR T+ GSV+KMDV LVQGKMIRYVHIPDKVDAISNL HMR M + YRRNMLK KT+
Sbjct: 1 MKNDAEISGILEETDRNMNLSMVDVRQTNPDGSVRKMDVVLVQGKMIRYVHIPDKVDAISNLQKHMRTMDQQ--GYRRNMLKPKTS 84
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: W4H8K5_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8K5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 9.510e-17 Identity = 39/106 (36.79%), Postives = 70/106 (66.04%), Query Frame = 0
Query: 22 RTLAILIQSMRGNRVVVEMKNDVEISGILEET-DGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSKTTP 126
R++ +L+QSM G V +E+K + + G +EE +GNM++ + +V+ TS QG++ +D V GKMI +VH+PD+++ +L +M+ + K+ + Y+R+ K TTP
Sbjct: 6 RSVVVLLQSMLGMDVKIELKTEYVLEGRVEEVGEGNMDVRLTNVKQTSPQGAIVHLDEVFVMGKMILFVHLPDRLNVAVHLRDYMQMVDKNRSMYQRSTRKPATTP 111
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A024UUS1_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUS1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 3.040e-15 Identity = 38/106 (35.85%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 22 RTLAILIQSMRGNRVVVEMKNDVEISGILEET-DGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSKTTP 126
R++ +L+QSM G V +E+K + + G +EE +GNM++ + V+ TS QG++ +D V GKMI +VH+PD+++ ++L +M + K+ Y+R+ K T P
Sbjct: 6 RSVVLLLQSMLGMDVKIELKTEYTLEGRVEEVGEGNMDVRLTGVKQTSPQGAIVHLDEVFVMGKMILFVHLPDRLNVAAHLRDYMHLVDKNKNLYQRSTRKPPTKP 111
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: UPI001E1D8F86 (U7 snRNA-associated Sm-like protein LSm10 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8F86) HSP 1 Score: 75.1 bits (183), Expect = 9.030e-15 Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = 0
Query: 23 TLAILIQSMRGNRVVVEMKNDVEISGILEETDGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYR 116
++ L++ + G R VEM+++ E++G+++ DG MN+SM DV + S G KK D V GK IRYVHIPD+++ S + ++ M TA R
Sbjct: 13 SMLCLLKVVEGKRTTVEMRDEKEVTGVIKHVDGYMNISMEDVVFKSLTGK-KKFDKFFVNGKTIRYVHIPDEINMKSAMEAKLKEMCTYTASMR 105
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A0L8G4N7_OCTBM (Sm domain-containing protein n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8G4N7_OCTBM) HSP 1 Score: 74.3 bits (181), Expect = 1.890e-14 Identity = 37/93 (39.78%), Postives = 60/93 (64.52%), Query Frame = 0
Query: 11 SAASRRTNPLERTLAILIQSMRGNRVVVEMKNDVEISGILEETDGNMNLSMVDVRYTSAQGSV--KKMDVALVQGKMIRYVHIPDKVDAISNL 101
+ +SR T ++ +L IL+Q++ G + V+++N+ + G+L D MNL++ DVRY SA V K D +QG+ +R+VHIPD VD IS++
Sbjct: 2 ATSSRETALIKNSLIILLQAIVGKQTTVDLRNENSVEGLLLHVDAFMNLTLEDVRYISANDKVGDKYFDKLFIQGREVRFVHIPDDVDIISSI 94
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: UPI0006C9B558 (U7 snRNA-associated Sm-like protein LSm10 isoform X1 n=2 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C9B558) HSP 1 Score: 71.2 bits (173), Expect = 9.470e-14 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 0
Query: 20 LERTLAILIQSMRGNRVVVEMKNDVEISGILEETDGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIP 92
L TLAIL++++ G R VE++N+ I G++E+TDG MN++M D +T +G K ++ VQ + IR+VH+P
Sbjct: 14 LYNTLAILLKAVEGERTTVELRNEASICGVVEQTDGFMNINMKDCLFTDPRGDSYKYEIFFVQARNIRHVHVP 86
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A5D6XV54_9STRA (Sm domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV54_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.010e-13 Identity = 36/104 (34.62%), Postives = 62/104 (59.62%), Query Frame = 0
Query: 22 RTLAILIQSMRGNRVVVEMKNDVEISGILEETDGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSKTT 125
R+L +L++S+ G RV V++KND + G++ E +M+ +MVD T G++ +MD V G+ I YVHIPD+++ +L + R + +S Y R + +T
Sbjct: 42 RSLLLLLKSLVGLRVRVDLKNDATVEGVVAEVVHDMDFTMVDACETKPNGAMVRMDEVFVMGRTILYVHIPDRINLTQHLQQYTRMVRQSATMYTRTKRSAAST 145
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A6G0XYB6_9STRA (Sm domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYB6_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 4.530e-13 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 0
Query: 15 RRTNPLERTLAILIQSMRGNRVVVEMKNDVEISGILEET-DGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDK---VDAISNLHI 103
+RTN R++ IL+QSM G V +E+K + + GI+EE G M+L M +V+ TS QG +D V GKMI YVH+PD+ +DA + H+
Sbjct: 4 KRTN---RSIIILLQSMLGMEVRIELKTEFIVEGIVEEVGQGTMDLRMSNVKSTSPQGVTMHLDEMFVMGKMILYVHLPDRYDLMDATTQAHV 93
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Match: A0A8K1CIL4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIL4_PYTOL) HSP 1 Score: 70.5 bits (171), Expect = 5.010e-13 Identity = 34/105 (32.38%), Postives = 63/105 (60.00%), Query Frame = 0
Query: 22 RTLAILIQSMRGNRVVVEMKNDVEISGILEETDGNMNLSMVDVRYTSAQGSVKKMDVALVQGKMIRYVHIPDKVDAISNLHIHMRAMAKSTADYRRNMLKSKTTP 126
R+L +L++S+ G RV +++KND + GI+EE +M+ +++D T G +++ V GK + YVHIPD+++ +L + R + +S Y+R+ K+ P
Sbjct: 20 RSLLLLLKSLAGLRVRIDLKNDCVVEGIVEEVLHDMDFTLLDACETKPNGRTVRLEEVFVMGKTVLYVHIPDRINISQHLQQYNRMIRQSQDMYKRDKRKAPLPP 124 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig97.64.1 ID=prot_A-nodosum_M_contig97.64.1|Name=mRNA_A-nodosum_M_contig97.64.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=128bpback to top |