prot_A-nodosum_M_contig97.44.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig97.44.1
Unique Nameprot_A-nodosum_M_contig97.44.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length874
Homology
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BLAST of mRNA_A-nodosum_M_contig97.44.1 vs. uniprot
Match: A0A6H5LQ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ53_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 7.610e-20
Identity = 156/517 (30.17%), Postives = 202/517 (39.07%), Query Frame = 0 
Query:    1 MNWMTSGRKRVQRSQKIKELRAKHFARVAADRAR-PLPKPLR--SSTSRQSADVSRLKTRWVQACRQRQPSP-------GRASSASSTCLDKDLAGSTIR-VNSPDDGQIVPRMLDIDATSRSIFDRPDIGGSNDEEWMPSTAGVVQG----------FDA--RVWPPSQXXXXXXXXXXAMSSIHAPPTAPAAQSLCLESTQLASACESNGEALQARDVEQEYDGQLLGSECQ-----------PRQETTAALRVADGTPLSG---TRGAMIITDTTSDFDSVEGTSGVSGYCNQIQIRMMEKDNPMRFFDSGIEVALDGSPVSSSITRYPQLMGTPTARSRASSSGSEMRPF-----------ASAGIFQPEG-GGLPKFR-----KNASCGE---------------DTPPQEQSTVNRDDVGNASPDNSTCGEKSCLVS----HRVTAARADTEKQ--MDTECHQSTPDEGYVSVVDRDEPPRKSPPSHEESPAFKVLARNWGLFGGALDSSS 442
            MNWMTSGRKRVQRSQK+KELRAKHFA+VAADRAR P+ +P R  SST  QSADVSRLK+RW+Q        P       G A++  +T  D     S +  + S       P  LD++ T           GS+    +P  A    G          F+   R  P  Q           +         P    L LE  QL    +  G   + +     Y+ Q +GSEC            PR E     R   G  L G   TR A    D+         T  V G   +    ++E  + MRFF+ G  VA DGSPV       P    +      ASS G  + P               G+ +    GGLP+F      ++ +C                 D     Q  + R    +  PD S        +     H   A+      Q   DT+  Q         ++D DE     PP     PAF VLAR WGLFGGALD+++
Sbjct:    1 MNWMTSGRKRVQRSQKVKELRAKHFAKVAADRARAPVSRPARASSSTLNQSADVSRLKSRWIQPLPSTHKVPALQRTVAGSAAAEHTTAEDSASPPSNVTTLGSGTTPDFQPGTLDLEVTPPFNATIRQQQGSDGMARIPGAALPTDGPRRGSSGDNDFERPLRHHPRQQRPTASFRGGGLLLRAQPEDRPPRHTLLPLERRQLV--FDGGGGTAEKQGFGNSYEEQPIGSECAGIGDGASNSSGPRVEED---RYPRGRALPGDISTRTAGAAADSDGTNADHNRTPRVMGQLGRASDPVVE--HTMRFFNDGFAVAQDGSPV----VDGPFTATSSATAVAASSVGGLVFPTNDHDNNRDTDGTQFGVRESGSTGGLPRFSIAGGLRDGNCSSPLATPAGLWKENMLSDYRSNRQCALARSSASDCGPDFSVQAPAEEQIQPGGHHCEDASEVHHHSQGEYDTDFEQGP-------MLD-DEELMNPPPRDAAPPAFDVLARTWGLFGGALDATT 498
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LQ53_9PHAE7.610e-2030.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..315
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 635..665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..612
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 382..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 678..719
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..419
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..736

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:499830..518235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.44.1mRNA_A-nodosum_M_contig97.44.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig97 499246..518294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig97.44.1 ID=prot_A-nodosum_M_contig97.44.1|Name=mRNA_A-nodosum_M_contig97.44.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=874bp
MNWMTSGRKRVQRSQKIKELRAKHFARVAADRARPLPKPLRSSTSRQSAD
VSRLKTRWVQACRQRQPSPGRASSASSTCLDKDLAGSTIRVNSPDDGQIV
PRMLDIDATSRSIFDRPDIGGSNDEEWMPSTAGVVQGFDARVWPPSQQQQ
QQQQQQQAMSSIHAPPTAPAAQSLCLESTQLASACESNGEALQARDVEQE
YDGQLLGSECQPRQETTAALRVADGTPLSGTRGAMIITDTTSDFDSVEGT
SGVSGYCNQIQIRMMEKDNPMRFFDSGIEVALDGSPVSSSITRYPQLMGT
PTARSRASSSGSEMRPFASAGIFQPEGGGLPKFRKNASCGEDTPPQEQST
VNRDDVGNASPDNSTCGEKSCLVSHRVTAARADTEKQMDTECHQSTPDEG
YVSVVDRDEPPRKSPPSHEESPAFKVLARNWGLFGGALDSSSVQNVVGVS
TESSSPPGAALHTDFTTWEENHRTNSPIGRPCRNDTKLPIKTSPFQAEVN
QPTRHVLRAQAAMSDVSVETSTARNDSPELVMLWETNEPSSEVDASCAGI
AHPNQAMATDYSDRLAASQSLPSGAGNAAAYDPDLHLNVLASSTEVSEAS
PGLPTTSTINRKESGRTVDDTARVAASSENPSKELKYSSPEKYPRESLGE
TSQRSRDKAKTPEAQSRGMGHHSQLGAASDGEKLEDKWERQEGRSKRAPA
GKDFEEHGHRLKRSTGDSPRTKQKGTPNSEVQTPDAVKARLGFPFSSITR
GKESPPVGTTFLGHGRRKEVPAESRSDGMARGNASKILIAGKTTRSRGLV
RSSRMLSGSLLRDKGRTGDIYYAAVEPLGARGGKHTCMRGLGGEIETDPP
RRESDDYSTIVWYRTIVACLMTE*
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