prot_A-nodosum_M_contig97.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig97.10.1
Unique Nameprot_A-nodosum_M_contig97.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length125
Homology
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A6H5JUF8_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF8_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 2.050e-81
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0
Query:    1 MAMGVEFTKYLIAPCGSFSKIARSEDGRVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAKYLPPC 124
            MAMGVEFTKYLIAPCGSF+KIARSEDGRVLYSLHTDESFSLFPRRNFN ALKAFLHCLGEVGDHVQEHDPTL+LPYHIKEKEGTVGGLPVALG S EDWTRALKYM+TDLKW+AAWAAKYLPPC
Sbjct:  294 MAMGVEFTKYLIAPCGSFTKIARSEDGRVLYSLHTDESFSLFPRRNFNFALKAFLHCLGEVGDHVQEHDPTLKLPYHIKEKEGTVGGLPVALGSSYEDWTRALKYMLTDLKWIAAWAAKYLPPC 417          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A836CRQ0_9STRA (Autophagy protein Apg6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRQ0_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.290e-32
Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0
Query:    8 TKYLIAPCGSFSKIARSEDG----------------RVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAKY 120
            +++ + P GSFS++A S                   R L++L +DE FSLFP R+ N AL+AF  C+GE G    + DPTL LP+ + +  GTVGG PVALG  LE WTRA+KY +T+LKW+ AW AKY
Sbjct:  278 SRHAVLPLGSFSRMAASNXXXXXXXXXXXXXXXXXXRTLHALFSDEGFSLFPHRSLNAALRAFAQCVGEAGQRAAQRDPTLALPHRVDDAAGTVGGAPVALGSDLEAWTRAMKYTLTNLKWLLAWVAKY 406          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A7S4JLS5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JLS5_9STRA)

HSP 1 Score: 107 bits (267), Expect = 4.490e-25
Identity = 58/123 (47.15%), Postives = 77/123 (62.60%), Query Frame = 0
Query:    4 GVEFTKYLIAPCGSFSKIARSE-DGR--VLYSL-HTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEK---EGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAK 119
            G++F  Y I P G++SKI   + DGR  VLY+L ++DESF  F +RNFN AL    HCL +  D     D T+ LP+ ++     E T+GGLPVA G   E WTRA+KY +TDLKW+ A+  K
Sbjct:  288 GIKFRSYEIIPLGNYSKIGLLQPDGRPPVLYNLFYSDESFQFFGKRNFNTALDGLFHCLKDAADAAARIDKTIVLPHRVEVSSRGEITIGGLPVAFGVDGETWTRAMKYFLTDLKWLIAFTTK 410          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A4D9D4J3_9STRA (APG6 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4J3_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.300e-25
Identity = 57/137 (41.61%), Postives = 83/137 (60.58%), Query Frame = 0
Query:    4 GVEFTKYLIAPCGSFSKIARSE------DGRVL-----------YSLHTDES-FSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLED-WTRALKYMITDLKWVAAWAAKYL 121
            G  F +  + P GSFSKI RS       + +V+            S + DE+  + FPRRN N AL AFL C+ E G HV+  DPT+RLP+ +++ +  +GGLP+      ED W RALKY++TDLKW++AW+A+++
Sbjct:  144 GFRFRRLELVPFGSFSKILRSPCDLSDVETKVMPNSPRFTASNAMSFYYDEANLAFFPRRNMNAALVAFLQCVEEFGSHVEGLDPTIRLPHRVQDNK--IGGLPIVFTPGEEDTWNRALKYLLTDLKWLSAWSARHV 278          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A7S1USY0_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USY0_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.620e-23
Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 0
Query:   12 IAPCGSFSKIARSED----GRVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIK-----EKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAKYL 121
            + P GS SKI   +         Y+L++D+SFSLF +RNFNLAL   L CL +  + V++ D T+ LP+ I+     + E T+G +PV  G   E WTRA+KYM+TD+KW+ A+ +K++
Sbjct:  156 LVPMGSTSKIGLRKTMGAAAATYYNLYSDDSFSLFGKRNFNLALNGLLKCLLDAAEAVEKRDRTIVLPHEIELTNSNQNEMTIGKIPVTFGTDGEQWTRAMKYMLTDVKWLVAFVSKHV 274          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A7S2UWM3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWM3_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 6.710e-23
Identity = 53/114 (46.49%), Postives = 69/114 (60.53%), Query Frame = 0
Query:    9 KYLIAPCGSFSKIARSEDGRVLYSLHTDESF--SLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAKY 120
            KY++ P GS S++ R  D R    L  D+ F  SLF R NF  AL AFL CL E  D V+  DPTL+ PY I+E +  +G   VA     E+WTRA+K M+T++KW+  W AKY
Sbjct:  125 KYIVRPLGSQSRLIRVGDSRTELCLFLDDRFTLSLFGRSNFTKALVAFLGCLKEAVDFVENQDPTLQAPYVIQEDK--IGEFSVAASND-EEWTRAMKCMLTNIKWILTWVAKY 235          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A7S2A6K8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6K8_TRICV)

HSP 1 Score: 98.6 bits (244), Expect = 3.220e-22
Identity = 54/123 (43.90%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    4 GVEFTKYLIAPCGSFSKIARSE-DGR--VLYSLH-TDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIK---EKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAK 119
            G++F K  I P G+FSKI  ++ DGR  VL++LH +++SF  F +RNFN AL    HCL +  D V   D    LP+ ++   + E T+GG+PV  G + E WT+A+KY +TDLKW+ A+  K
Sbjct:  203 GIKF-KNEILPMGNFSKIGIAQTDGRPPVLFNLHYSEDSFQFFGKRNFNTALDGLFHCLKDASDAVSRIDKATALPHKVEVSPQGEVTIGGIPVTYGDNGEVWTKAMKYFLTDLKWLLAFTTK 324          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A067BKQ5_SAPPC (APG6 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BKQ5_SAPPC)

HSP 1 Score: 97.4 bits (241), Expect = 3.480e-22
Identity = 52/117 (44.44%), Postives = 73/117 (62.39%), Query Frame = 0
Query:    5 VEFTKYLIAPCGSFSKI--ARSEDGRVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAK 119
            + F ++     GS+SK+  A S+D R  Y L++D SF  F R+ FN AL  FL C+ E G      +P+LR PY I +  G +G L +++GG+ E WTRALKY++T LKW+ AW AK
Sbjct:  149 LNFARHTPVARGSYSKMLTAPSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIYK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAK 261          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: A0A3M6V8C9_9STRA (APG6 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8C9_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.770e-22
Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    4 GVEFTKYLIAPCGSFSKIARSEDGRVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAK 119
            G EF++  + P GSFS++       +LYS        +F RR FN A+  FL C+ + G    + +P L+ PY ++   G +GGLP++LG   E WTRALKYM+T LKW+ AW +K
Sbjct:   63 GFEFSRNRLVPRGSFSRVVN-----ILYS-----DGGMFRRRGFNQAMILFLECVEDAGRRAMKEEPLLKFPYKVER--GKIGGLPISLGND-EQWTRALKYMLTHLKWLLAWISK 165          
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Match: T0RCX9_SAPDV (APG6 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RCX9_SAPDV)

HSP 1 Score: 99.8 bits (247), Expect = 6.730e-22
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 0
Query:    7 FTKYLIAPCGSFSKI--ARSEDGRVLYSLHTDESFSLFPRRNFNLALKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWTRALKYMITDLKWVAAWAAKYLP 122
            F ++     GS+SK+  A+S+D R  Y L++D SF  F R+ FN AL  FL C+ E G      +P+LR PY I +  G +G L +++GG+ E WTRALKY++T LKW+ AW AK  P
Sbjct:  548 FARHTPVARGSYSKMLTAQSKDKRKEYPLYSDGSF--FQRQKFNQALVFFLECVDEAGVRAMREEPSLRFPYKIYK--GKIGELAISVGGNDEQWTRALKYLLTHLKWLLAWIAKRYP 661          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUF8_9PHAE2.050e-8194.35APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CRQ0_9STRA2.290e-3246.51Autophagy protein Apg6-domain-containing protein n... [more]
A0A7S4JLS5_9STRA4.490e-2547.15Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A4D9D4J3_9STRA9.300e-2541.61APG6 domain-containing protein n=2 Tax=Monodopsida... [more]
A0A7S1USY0_9STRA3.620e-2342.02Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2UWM3_9STRA6.710e-2346.49Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2A6K8_TRICV3.220e-2243.90Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A067BKQ5_SAPPC3.480e-2244.44APG6 domain-containing protein n=1 Tax=Saprolegnia... [more]
A0A3M6V8C9_9STRA5.770e-2241.38APG6 domain-containing protein n=1 Tax=Peronospora... [more]
T0RCX9_SAPDV6.730e-2244.92APG6 domain-containing protein n=1 Tax=Saprolegnia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040455Atg6, BARA domainPFAMPF04111APG6coord: 3..118
e-value: 1.7E-27
score: 96.6
IPR038274Atg6/Beclin C-terminal domain superfamilyGENE3D1.10.418.40Autophagy protein 6/Beclin 1coord: 1..121
e-value: 6.8E-31
score: 109.3
NoneNo IPR availablePANTHERPTHR12768:SF4BECLIN-1coord: 3..119
IPR007243Atg6/BeclinPANTHERPTHR12768BECLIN 1coord: 3..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:172114..172714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.10.1mRNA_A-nodosum_M_contig97.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig97 171656..173500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig97.10.1 ID=prot_A-nodosum_M_contig97.10.1|Name=mRNA_A-nodosum_M_contig97.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=125bp
MAMGVEFTKYLIAPCGSFSKIARSEDGRVLYSLHTDESFSLFPRRNFNLA
LKAFLHCLGEVGDHVQEHDPTLRLPYHIKEKEGTVGGLPVALGGSLEDWT
RALKYMITDLKWVAAWAAKYLPPC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040455Atg6_BARA
IPR038274Atg6/Beclin_C_sf
IPR007243Atg6/Beclin