prot_A-nodosum_M_contig967.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig967.29.1
Unique Nameprot_A-nodosum_M_contig967.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length393
Homology
BLAST of mRNA_A-nodosum_M_contig967.29.1 vs. uniprot
Match: D7FSD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSD6_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 3.370e-66
Identity = 161/391 (41.18%), Postives = 214/391 (54.73%), Query Frame = 0
Query:    1 MGAGASAASMSLEDRRALYQEVKSKYTRADLDALEDEAKKAWLEVLTERERVDLSRALGDGDDKAVPDNAGSFAS-KNSIFLSLHRLPLFFVDFYVDRRFTSKKSVELRQKRHAATTALCRGRGSANNNGGDSDGDGST-VRPQRRRTRMSYHLVSEQ-GEADASGIPNGSIFLEGEDRGKAARETATVGVLQGPSRRLSVDTPSWKRTAIEVESAVELSVGDVVRASRDTATSNGMWFEGVLIAIHDEFTFTVELTCNDQS--GNMDCITVGINDLVRVMPWFCIEVDDIVEFQTNESMGWFRGVVVGVDSDRLVYDVELES--DSTHD--EAYETVESMGGGEWRESKRSDEDNGKEEAAGRSGVIYRVADDKIRKICSGRQAVARRWK 382
            MGAGASAA M L++RR LY+++K+KYTR+DLD L +E K+AWLEVL ERE      A+   +  AV +   + A+ +  + +           F  +    S   V +R+   AA  A   G  S   +G D  G G T VRPQ + TR+SY + S+  G+A  +G                          +   +R S   P+W++ A EVE+  EL VGD+VR  RD    NGMWFEGVL AIHDE TF VEL+ +D+   G +  ITVGI+D+VRVMPWFCIEV D+VE Q   +M W RG VV +  ++ +YDV LES  D   D  E Y   +  GGG   E K+        EA+     +YRV +  IRK+ SGRQA A+RWK
Sbjct:    1 MGAGASAAGMPLQERRDLYEDLKNKYTRSDLDNLAEEEKQAWLEVLDEREAGTAPAAVTAAETTAVAEPVKNGATGEQGVEVEKREADAAACSFNEENLSVSAPEVTVREA--AAAAAALTGASSGRKSGWDLSGGGDTGVRPQEKHTRLSYLVGSDSSGDARENGXXXXXXXXXXXXX-XXXXXXXXXXXXRHSGKRGSAVVPNWRKAAEEVETPNELCVGDIVRV-RDKEL-NGMWFEGVLTAIHDESTFEVELSGDDEDEEGCVQHITVGIDDVVRVMPWFCIEVGDMVECQLEGTMIWLRGTVVNIHLEQALYDVALESCEDGQADGRETYGENDVAGGGGDCEKKQG-------EAS--PNTMYRVPESSIRKVVSGRQAAAKRWK 377          
BLAST of mRNA_A-nodosum_M_contig967.29.1 vs. uniprot
Match: A0A6H5JS13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS13_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.160e-56
Identity = 149/398 (37.44%), Postives = 200/398 (50.25%), Query Frame = 0
Query:   20 QEVKSKYTRADLDALEDEAKKAWLEVLTERERVDLSRAL--------------GDGDDKAVP-----DNAGSFASKNSIFLSLHRLPLFFVDFYVDRRFTSKKSVELRQKRHAATTALCRGRGSANNNGGDSDGDGST-VRPQRRRTRMSYHLVSEQGEADASGIPNGSIFLEGEDRGKAARETATVGVLQGPSRRLSVDTPSWKRTAIEVESAVELSVGDVVRA--SRDTATSNGMWFEGVLIAIHDEFTFTVELTCNDQS--GNMDCITVGINDLVRVMPWFCIE---VDDIVEFQTNESMGWFRGVVVGVDSDRLVYDVELESDST--HDEAYETVES---MGGGEWRESKRSDEDNGKEEAAGRSGVIYRVADDKIRKICSGRQAVARRWKTSI 385
            Q++K+KYTR+DLD L +E K+AWLEVL ERE    + A+              G  +++ V       +A + +S   I LS+                    + E+R +          G  S   +G D  G+G T VRPQ + TR+SY +  E G  D      G   L+ E   +A  +       +   +R S   P+W++ A EVE+  EL VGD+VR   +RD    NGMWFEGVL AIHDE TF VEL  +D+   G +  ITVGI+D+VRVMPWFCIE   V D+VE Q   +M W RG VV V  ++ VYDV LE +     D+   T       GGGE         D  K++       +YRV +  IRK+ SGRQA A+RWK  I
Sbjct:   34 QDLKNKYTRSDLDNLAEEEKQAWLEVLDEREAEAAAAAVTAAETTGVARGVENGATEERGVEVEKGEADAAACSSNEQINLSV-------------------SAPEVRVREAXXXXXALTGASSGRKSGWDLSGEGDTGVRPQAKHTRLSYLVEPESGGDDRESGRGGGSDLQAERGNRAPADDGGGDSRRHSGKRGSAVVPNWRKAAEEVETPNELCVGDIVRVRQARDKEL-NGMWFEGVLAAIHDESTFEVELGGDDEDEEGGVQYITVGIDDVVRVMPWFCIEASLVGDMVECQLEGTMMWLRGTVVNVHLEQAVYDVALEPECEDGQDDGLATFGENAVAGGGE---------DCDKKQGEASPNTMYRVPESSIRKVVSGRQAAAKRWKKVI 402          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig967.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSD6_ECTSI3.370e-6641.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS13_9PHAE1.160e-5637.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig967contigA-nodosum_M_contig967:213442..218184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig967.29.1mRNA_A-nodosum_M_contig967.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig967 213442..219472 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig967.29.1 ID=prot_A-nodosum_M_contig967.29.1|Name=mRNA_A-nodosum_M_contig967.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=393bp
MGAGASAASMSLEDRRALYQEVKSKYTRADLDALEDEAKKAWLEVLTERE
RVDLSRALGDGDDKAVPDNAGSFASKNSIFLSLHRLPLFFVDFYVDRRFT
SKKSVELRQKRHAATTALCRGRGSANNNGGDSDGDGSTVRPQRRRTRMSY
HLVSEQGEADASGIPNGSIFLEGEDRGKAARETATVGVLQGPSRRLSVDT
PSWKRTAIEVESAVELSVGDVVRASRDTATSNGMWFEGVLIAIHDEFTFT
VELTCNDQSGNMDCITVGINDLVRVMPWFCIEVDDIVEFQTNESMGWFRG
VVVGVDSDRLVYDVELESDSTHDEAYETVESMGGGEWRESKRSDEDNGKE
EAAGRSGVIYRVADDKIRKICSGRQAVARRWKTSIQDPWTSE*
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