prot_A-nodosum_M_contig964.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig964.26.1
Unique Nameprot_A-nodosum_M_contig964.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length66
Homology
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6H5JS61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS61_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.390e-12
Identity = 34/64 (53.12%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 GVVLEGSLRECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDD 64
            G  L G LREC  CS AK L KPI   TSTRA K   R+F D+ G   VES+GGKRY +++ D+
Sbjct:  499 GTTLVGKLRECLGCSTAKRLSKPIPNKTSTRAAKKLQRVFADLSGKARVESLGGKRYTVIVWDE 562          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6H5KV13_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV13_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.430e-12
Identity = 34/61 (55.74%), Postives = 41/61 (67.21%), Query Frame = 0
Query:    1 GVVLEGSLRECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLI 61
            G  L G LREC  CS AKGL KPI   TSTRA K   R+FVD+ G  +V+S+GGK Y L++
Sbjct:  445 GTTLVGELRECLGCSTAKGLSKPIPNKTSTRAAKKLQRVFVDLSGRATVQSLGGKWYTLIV 505          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 7.510e-11
Identity = 34/66 (51.52%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 GVVLEGSLRECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            G +L G L EC  C  AKGL KPI +T STRA K   R+FVD+ G   V+S+GGK Y L++ DD++
Sbjct:  967 GTMLLGELPECLGCLTAKGLSKPIPKT-STRAAKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYT 1031          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6H5K3H9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3H9_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 7.880e-6
Identity = 23/66 (34.85%), Postives = 38/66 (57.58%), Query Frame = 0
Query:    1 GVVLEGSLRECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            G+ + G+   C  C VAK + + +   T  +A++ FGR F+D+ G     S GG RY +++ DD+S
Sbjct:  230 GIQVTGTRGYCAGCGVAKAIRRSVPMETKAKAERPFGRAFIDLTGPYP-PSTGGARYCMMVVDDYS 294          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6L2LDS3_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LDS3_TANCI)

HSP 1 Score: 50.8 bits (120), Expect = 1.090e-5
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   11 CERCSVAKGLGKPIG-RTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            C  C++ K + K    +TT T  +K++  L++D+CG   VESI GK+Y+L+I DD+S
Sbjct:  320 CSACAMGKSMKKSHKPKTTDTNQEKLY-LLYMDLCGPMRVESINGKKYILVIVDDYS 375          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A699M3L7_TANCI (Gag-Pol polyprotein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699M3L7_TANCI)

HSP 1 Score: 48.9 bits (115), Expect = 5.040e-5
Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = 0
Query:   11 CERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            C  C   K   K +   T+  ++K    L++D+CG+  V+SI GKRY+L++ DD+S
Sbjct:   34 CSACEQGKIYRKHLKSKTAFASNKTLYLLYMDLCGSMRVQSINGKRYVLVVVDDYS 89          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6L2MLX5_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2MLX5_TANCI)

HSP 1 Score: 48.5 bits (114), Expect = 7.100e-5
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0
Query:   11 CERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            C  C + K   K     T+  + +    L +D+CG+  VESI GK+Y+LLI DD+S
Sbjct:   62 CSSCELGKAKRKSFQTKTTPSSKRRLQLLHMDLCGSMRVESINGKKYVLLIVDDYS 117          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A699J753_TANCI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699J753_TANCI)

HSP 1 Score: 48.1 bits (113), Expect = 9.750e-5
Identity = 22/56 (39.29%), Postives = 32/56 (57.14%), Query Frame = 0
Query:   11 CERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            C  C + K   K I   T+  + +    L +D+CG   VESI GK+Y+L+I DD+S
Sbjct:  604 CSSCELGKAKRKSIQTKTTPSSKRRLQLLHMDLCGPMRVESINGKKYVLVIVDDYS 659          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: UPI000D08EFC7 (uncharacterized protein LOC112163692 n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI000D08EFC7)

HSP 1 Score: 48.1 bits (113), Expect = 9.830e-5
Identity = 26/57 (45.61%), Postives = 34/57 (59.65%), Query Frame = 0
Query:   10 ECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            EC+    A+ L K I   T+TR   V   L +D+ G    ESIGGK+Y+L+I DDFS
Sbjct:  860 ECKTGKQARSLHKSINSATTTR---VLELLHMDLMGPAQTESIGGKKYILVIVDDFS 913          
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Match: A0A6L2LQ99_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LQ99_TANCI)

HSP 1 Score: 48.1 bits (113), Expect = 9.830e-5
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0
Query:   11 CERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVESIGGKRYMLLICDDFS 66
            C  C   K   K     T+  ++K+F  L +D+CG   VESI GKRY+L++ DD+S
Sbjct:  576 CSACEQGKIHRKHHKSKTALASNKLFYLLHMDLCGPMRVESINGKRYVLVVVDDYS 631          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig964.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5JS61_9PHAE2.390e-1253.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV13_9PHAE2.430e-1255.74CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K583_9PHAE7.510e-1151.52Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3H9_9PHAE7.880e-634.85Integrase catalytic domain-containing protein (Fra... [more]
A0A6L2LDS3_TANCI1.090e-542.11Retrovirus-related Pol polyprotein from transposon... [more]
A0A699M3L7_TANCI5.040e-537.50Gag-Pol polyprotein (Fragment) n=1 Tax=Tanacetum c... [more]
A0A6L2MLX5_TANCI7.100e-539.29Integrase catalytic domain-containing protein n=1 ... [more]
A0A699J753_TANCI9.750e-539.29Integrase catalytic domain-containing protein (Fra... [more]
UPI000D08EFC79.830e-545.61uncharacterized protein LOC112163692 n=1 Tax=Rosa ... [more]
A0A6L2LQ99_TANCI9.830e-541.07Retrovirus-related Pol polyprotein from transposon... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig964contigA-nodosum_M_contig964:269835..270032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig964.26.1mRNA_A-nodosum_M_contig964.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig964 269835..270032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig964.26.1 ID=prot_A-nodosum_M_contig964.26.1|Name=mRNA_A-nodosum_M_contig964.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=66bp
GVVLEGSLRECERCSVAKGLGKPIGRTTSTRADKVFGRLFVDICGAKSVE
SIGGKRYMLLICDDFS
back to top