prot_A-nodosum_M_contig964.1.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig964.1.3
Unique Nameprot_A-nodosum_M_contig964.1.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length511
Homology
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BLAST of mRNA_A-nodosum_M_contig964.1.3 vs. uniprot
Match: A0A6H5JN10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN10_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 5.370e-41
Identity = 98/154 (63.64%), Postives = 118/154 (76.62%), Query Frame = 0 
Query:  303 GADSGVVGIGEIEKEERRLNEKASKLELEMSAVQRRRVEVHLVKVEQQLEDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLREKLEQLSSMYXXXXXXXXXXXXXXTNAEDELRERASVDQRKAEQREEQGVRRRIRAMMIE 456
            GA  GVVG+GEIE+EERRL EKASKLELEMSAVQ RR+EV+LVKVEQQL++EAA RL+ RE R+  E+ER+CKAL  ERD+RV  VAA K+NLR KLEQLS MY                AE EL++RA  DQRKA +RE++GVRRR+RA+M+E
Sbjct:   97 GAGVGVVGMGEIEEEERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSIMYEEVSTRMDNLEKAYAQAESELKDRALADQRKAVEREDRGVRRRVRAIMLE 250
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BLAST of mRNA_A-nodosum_M_contig964.1.3 vs. uniprot
Match: D7G239_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G239_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 9.240e-34
Identity = 87/139 (62.59%), Postives = 107/139 (76.98%), Query Frame = 0 
Query:  318 ERRLNEKASKLELEMSAVQRRRVEVHLVKVEQQLEDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLREKLEQLSSMYXXXXXXXXXXXXXXTNAEDELRERASVDQRKAEQREEQGVRRRIRAMMIE 456
            ERRL EKASKLELEMSAVQ RR+EV+LVKVEQQL++EAA RL+ RE R+  E+ER+CKAL  ERD+RV  VAA K+NLR KLEQLS+MY                AE+EL++RA  DQRKA +RE++GVRRR+RA+M+E
Sbjct:  255 ERRLQEKASKLELEMSAVQSRRLEVYLVKVEQQLQEEAAMRLVQREARINLEVERSCKALAAERDERVSGVAAVKDNLRGKLEQLSTMYEEVSTRMNNLEKAYAQAENELKDRALADQRKAAEREDRGVRRRVRAIMLE 393
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig964.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JN10_9PHAE5.370e-4163.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G239_ECTSI9.240e-3462.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 388..443
NoneNo IPR availableCOILSCoilCoilcoord: 311..338
NoneNo IPR availableCOILSCoilCoilcoord: 360..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 492..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..510
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..252
NoneNo IPR availableCDDcd00890Prefoldincoord: 318..431
e-value: 0.00853549
score: 34.6137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig964contigA-nodosum_M_contig964:1375..21532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig964.1.3mRNA_A-nodosum_M_contig964.1.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig964 53..21676 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig964.1.3 ID=prot_A-nodosum_M_contig964.1.3|Name=mRNA_A-nodosum_M_contig964.1.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=511bp
MSSRAIVPMAALTTSPGDPNPEGDNLSCWGSVENPPTAAPAVVSVSFTAP
PRHRRMSAPSRPVSTGRGASTGGRSARDGPFPSLPTAAVVARRRAAANGG
GGDGREGSSGTDLRRGAVRSKSASRGATVNITTRATAVWDERPPWNQSFA
AKPGKDRQPASGKARGRDDYPSPAGAVNKQKTKRLSAGSAGCLGRRAGVD
PATTRTSDNTDEGGSDESELDAAAPSQQDIRRMIERIRREADREDPKSVE
VGTNGERRAPAEGDGATAPTAAGSRGRHPFTGGAGSASKGSKARPPPPPP
AAGADSGVVGIGEIEKEERRLNEKASKLELEMSAVQRRRVEVHLVKVEQQ
LEDEAASRLMLREKRLRTEMERACKALREERDDRVCKVAAAKENLREKLE
QLSSMYEEVSKRLEELKMAYTNAEDELRERASVDQRKAEQREEQGVRRRI
RAMMIEQSKNALDDGVEIESGPRRARRKRLRRSRRSSRRSYSPRSRSASR
VSSSSSSSSA*
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