prot_A-nodosum_M_contig96.67.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.67.3
Unique Nameprot_A-nodosum_M_contig96.67.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length486
Homology
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: D8LFD6_ECTSI (Serine hydroxymethyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD6_ECTSI)

HSP 1 Score: 848 bits (2191), Expect = 5.550e-309
Identity = 412/485 (84.95%), Postives = 438/485 (90.31%), Query Frame = 0
Query:    1 MAPTEVPSKLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEMDH 485
            M+ TEVPS LPGN +L  HDP +FDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEG+PGARYYGGN++VDQIE LCQ RALEAYGLDPEKWGVNVQPYSGSPANFA YT LLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV P+TGLIDH+DLARLAGLFKPAMVICGGSAYPR+WDY KFREIADANG+ LLCDMAHISGLVVTKEAASPF+ CDVVTTTTHKSLRGPRAGLIFYRK              DER F  KIN AVFPALQGGPHEHQIAGVATQL E+MTPEFKEYI+QVKKNA+ACA+ LVK GYT+CTGGTENHLLLWDLRP+ LTGSKMEKICDKVHITLNKNAVQGDRSA+SPGG R+G PALT+RGMKE EF +IA FMDRAAQ+A+KIQ+ SGKMLKDF  ALE +EEVKALG+DVK FARRWPMPGFE SELKFKEMDH
Sbjct:    1 MSTTEVPSTLPGNVSLADHDPAMFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGVPGARYYGGNQVVDQIEGLCQSRALEAYGLDPEKWGVNVQPYSGSPANFAAYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPDTGLIDHDDLARLAGLFKPAMVICGGSAYPREWDYAKFREIADANGALLLCDMAHISGLVVTKEAASPFDHCDVVTTTTHKSLRGPRAGLIFYRK--------------DERGFESKINQAVFPALQGGPHEHQIAGVATQLKEAMTPEFKEYIIQVKKNASACADELVKLGYTICTGGTENHLLLWDLRPKALTGSKMEKICDKVHITLNKNAVQGDRSAMSPGGVRIGAPALTTRGMKEPEFRQIAAFMDRAAQLAIKIQQGSGKMLKDFAIALESDEEVKALGDDVKAFARRWPMPGFEASELKFKEMDH 471          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A836CHR3_9STRA (Glycine hydroxymethyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHR3_9STRA)

HSP 1 Score: 764 bits (1973), Expect = 8.160e-276
Identity = 370/478 (77.41%), Postives = 412/478 (86.19%), Query Frame = 0
Query:    6 VPSKLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEM 483
            +P  LPGN +LE HDPV+ DLIEKEKTRQWS LELIASENFTSRAVM+CLGSALTNKYAEGLP ARYYGGNEIVDQIE LC+ RALEAY LDP++WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSK E TRKAVSATSVYFESLPYRV+PETGLID ++L +LA LFKPAM++CGGSAYPRDWDY +FR IAD NG+ LLCDMAHISGLV+T+EA +PF++CDVVTTT HKS+RGPRAG+IF++K              D R+F P+INNAVFPALQGGPHEHQIAG+ATQL E M+P FK YI QVK NAAACA  LV+ GYTLCTGGTENHLLLWDLRP+ LTGSKMEKICD VHITLNKNAVQGDRSAVSPGG R+G PALT+RGM   +F  IADF+ RAAQIALKIQETSGK LK FV AL  N ++KALG++V  FA+R+PMPGF VSELK+K +
Sbjct:    4 IPKTLPGNMSLEEHDPVMADLIEKEKTRQWSCLELIASENFTSRAVMECLGSALTNKYAEGLPHARYYGGNEIVDQIEDLCRNRALEAYRLDPKEWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKAENTRKAVSATSVYFESLPYRVNPETGLIDFDELRKLAALFKPAMIVCGGSAYPRDWDYTQFRAIADENGALLLCDMAHISGLVLTQEANNPFDYCDVVTTTCHKSMRGPRAGMIFFKK--------------DSRNFEPRINNAVFPALQGGPHEHQIAGIATQLKECMSPVFKTYIQQVKTNAAACAARLVEHGYTLCTGGTENHLLLWDLRPQGLTGSKMEKICDAVHITLNKNAVQGDRSAVSPGGVRIGAPALTTRGMGAADFQAIADFLHRAAQIALKIQETSGKQLKQFVEALANNADIKALGDEVTAFAQRFPMPGFNVSELKYKTL 467          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A6V3AI80_HETAK (Serine hydroxymethyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AI80_HETAK)

HSP 1 Score: 718 bits (1853), Expect = 1.450e-257
Identity = 346/478 (72.38%), Postives = 395/478 (82.64%), Query Frame = 0
Query:    6 VPSKLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEM 483
            +P KLPGN +LE HDP +FDLIE+EK RQW SLELIASENFTSRAV +CLGSALTNKYAEGLPGARYYGGNE VDQ+E+LC  RAL AY L+P++WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYS+ E TRKAVSATSVYFESLPYRV PETGL+D+E L   A L+KPA+++CGGSAYPRDWDY +FR IAD NGS L+CDMAHISGLV T+EA +PFE CDVVTTTTHKSLRGPRAGLIF+R+              D+RDF  KINNAVFPALQGGPHEHQIA VATQL E  TPEFK Y VQVK N+ A A+ L  KGY +CTGGT+NHL+LWDLRPE LTGSK EKICD +HITLNKNAV GDRSAVSPGG R+G PALT+RG KEE F ++A+F+  A  +A +IQ +SGKMLKDFVAAL+ + +V+ L   V  FA ++PMPGFEVS +++  +
Sbjct:    5 IPDKLPGNASLEEHDPEMFDLIEREKQRQWRSLELIASENFTSRAVFECLGSALTNKYAEGLPGARYYGGNEYVDQVENLCISRALTAYRLNPDEWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSRAENTRKAVSATSVYFESLPYRVHPETGLLDYEKLREQAALYKPALIVCGGSAYPRDWDYAQFRAIADENGSILMCDMAHISGLVATQEANNPFEHCDVVTTTTHKSLRGPRAGLIFFRR--------------DDRDFPRKINNAVFPALQGGPHEHQIAAVATQLKEVATPEFKAYAVQVKANSKAVADALTAKGYRMCTGGTDNHLVLWDLRPEGLTGSKYEKICDAIHITLNKNAVVGDRSAVSPGGVRIGAPALTTRGFKEEHFVQVAEFLHEAVVLAKEIQASSGKMLKDFVAALKTDAKVQELAGRVSAFATQFPMPGFEVSGMRYNSV 468          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A7S2MVH6_9STRA (Serine hydroxymethyltransferase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MVH6_9STRA)

HSP 1 Score: 715 bits (1845), Expect = 3.860e-256
Identity = 352/475 (74.11%), Postives = 391/475 (82.32%), Query Frame = 0
Query:    9 KLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEM 483
            K  G   LE HDP ++DLIE+EK RQW SLELIASENFTSRAVMDCLGSALTNKY+EGLP ARYYGGNE++DQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV PETG+ID+E L+R AGLFKPA++I GGSAYPR WDY KFREIADANGS L+ DMAHISGLV T  ++SPFE+CDVVTTTTHKSLRGPRAG+IF+RK              DER F  KIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y  QV KNAAA A+ L   GYT+ TGGT NHL+LWDL+P+++TGSK EK CD V ITLNKN V GDRSA++PGG R+G PALT+R M E +F +IA F+  A QIALKIQE SG  LKDFVA LE NEE+ AL   V +FA  +PMPGF+ S++K+  +
Sbjct:   21 KFTGLVPLEEHDPEMYDLIEQEKARQWKSLELIASENFTSRAVMDCLGSALTNKYSEGLPHARYYGGNEVIDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPETGIIDYEQLSRDAGLFKPALIIAGGSAYPRHWDYAKFREIADANGSLLMTDMAHISGLVATGASSSPFEYCDVVTTTTHKSLRGPRAGMIFFRK--------------DERGFETKINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKTYSDQVCKNAAALADKLTSMGYTMATGGTVNHLVLWDLKPQKITGSKFEKTCDAVSITLNKNCVPGDRSAITPGGVRIGAPALTTRKMVEADFEQIAMFLHEALQIALKIQEQSGPKLKDFVALLEKNEEIVALRGKVNQFASSFPMPGFDPSQMKYNTL 481          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A1E7EPI0_9STRA (Serine hydroxymethyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EPI0_9STRA)

HSP 1 Score: 709 bits (1829), Expect = 7.530e-254
Identity = 344/471 (73.04%), Postives = 391/471 (83.01%), Query Frame = 0
Query:   12 GNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKE 482
            G  +LE HDP LFDLIE+EK RQW SLELIASENFTS+AVMDCLGSALTNKY+EGLPGARYYGGNE+VDQ+E+LCQKRAL+AYGLDPEKWGVNVQPYSGSPANFAVYTGLL+PHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFES PYRV PETG +DH+ LAR AG+FKPAM+ICGGSAYPRDWDYGKFREIADANGS L+ DMAHISGLV T E  SPF++CDVVTTTTHKSLRGPRAG+IF+RK              DER F  KIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y  QVKKNA A AE L  KGY + +GGTENHL+LWDL+P  +TGSK EK CD V+ITLNKN V GDRSA++PGG R+G  ALT+R M E +F +IA+ +    + ALK+QE SG  LKDF A L+G+E +K++ E V  FA  +PMPGF+ +++K+++
Sbjct:   11 GLVSLEDHDPELFDLIEQEKNRQWRSLELIASENFTSKAVMDCLGSALTNKYSEGLPGARYYGGNEVVDQVETLCQKRALKAYGLDPEKWGVNVQPYSGSPANFAVYTGLLKPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESFPYRVHPETGYVDHDGLARDAGVFKPAMIICGGSAYPRDWDYGKFREIADANGSLLMMDMAHISGLVATGEQTSPFDYCDVVTTTTHKSLRGPRAGMIFFRK--------------DERGFETKINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKVYSQQVKKNANALAEKLQSKGYKMASGGTENHLVLWDLKPAGITGSKYEKCCDFVNITLNKNCVPGDRSAITPGGVRIGACALTTRKMCEPDFEQIAELLHEVLEAALKLQEKSGPKLKDFTALLDGDETLKSIRERVNAFATTFPMPGFDPTKMKYQK 467          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A7S4IQ68_9STRA (Serine hydroxymethyltransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IQ68_9STRA)

HSP 1 Score: 708 bits (1827), Expect = 1.310e-253
Identity = 346/472 (73.31%), Postives = 389/472 (82.42%), Query Frame = 0
Query:    9 KLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKF 480
            K  G  +LE HDP ++DLIE+EK RQW+ LELIASENFTSRAVM+CLGSALTNKYAEGLP ARYYGGNE+VDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKE TRKAVSATSVYFES PYRV PETG ID++ LA  A  FKPA++ICGGSAYPRDWDY KFR+IAD NGS LLCDMAHISGLV T E ++PF+ CDVVTTTTHKSLRGPRAG+IF+RK              DER F  KIN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y  QV+KNA A A+ L   GY++ TGGT+NHL+LWDL+P+ +TGSK EK CD V ITLNKN V GDRSAV+PGG R+G PALT+R M EE+F +IA F+    +IALK+QE SG  LKDFVA LEGN+E+K L + V EFA ++PMPGF+ + +K+
Sbjct:    8 KFTGLVSLEEHDPEMYDLIEQEKHRQWTGLELIASENFTSRAVMECLGSALTNKYAEGLPHARYYGGNEVVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEKTRKAVSATSVYFESFPYRVHPETGYIDYDKLADDAATFKPALIICGGSAYPRDWDYAKFRKIADDNGSLLLCDMAHISGLVATGEQSTPFDLCDVVTTTTHKSLRGPRAGMIFFRK--------------DERGFEAKINQAVFPALQGGPHEHQIAGVATQLKECMTPEFKVYAQQVRKNAKALADKLTSMGYSMATGGTDNHLVLWDLKPQGITGSKFEKACDAVSITLNKNCVPGDRSAVTPGGVRIGAPALTTRKMTEEDFEQIAAFLAETLKIALKLQEQSGPKLKDFVALLEGNDEMKELKKRVNEFAVKFPMPGFDPTTMKY 465          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A5D6XJP3_9STRA (Serine hydroxymethyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJP3_9STRA)

HSP 1 Score: 706 bits (1822), Expect = 6.510e-253
Identity = 339/473 (71.67%), Postives = 387/473 (81.82%), Query Frame = 0
Query:   12 GNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEMD 484
            G  +LE  DP +F+LIE EK RQW  LELIASENFTSRAVMDCLGS LTNKYAEGLP ARYYGGNE++D+IE LCQ+RAL AYGLD +KWGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSK E TRKAVSATSVYFESLPYRVSPETGLID + LA LA LFKPAM++CGGSAYPRDWDY +FR+IAD NG+ L+CDMAH SGLV T E  SPFE+CDVVTTTTHKSLRGPRAG+IF++K              D R+F PKINNAVFPALQGGPHEHQIAG+A QL E  TPEFK+Y+VQ+K NA   AE L+  GYT+CTGGT+NHL+LWDLRP  +TGSK+EK+CD V ITLNKNAVQGDRSAV+PGG R+GTPALTSRG KE +F ++A F+DRA ++ L+IQ TSGK L DFV A E +E VK L  DV   A  + MPGF+V+ ++ K ++
Sbjct:    5 GTRSLEEQDPEIFNLIEAEKNRQWKCLELIASENFTSRAVMDCLGSCLTNKYAEGLPNARYYGGNEVIDKIEILCQQRALTAYGLDADKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKAENTRKAVSATSVYFESLPYRVSPETGLIDFDSLAELAALFKPAMIVCGGSAYPRDWDYARFRKIADDNGALLMCDMAHYSGLVATGEHNSPFEYCDVVTTTTHKSLRGPRAGMIFFKK--------------DARNFEPKINNAVFPALQGGPHEHQIAGIAAQLKEVATPEFKQYVVQLKANAKVLAETLMASGYTMCTGGTDNHLILWDLRPAGVTGSKLEKLCDLVSITLNKNAVQGDRSAVTPGGVRIGTPALTSRGFKEADFVQVAGFLDRAVKLCLEIQATSGKKLVDFVKAAEAHEAVKQLRRDVNALATSFEMPGFDVATMRNKSLE 463          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A7R9WYA7_9STRA (Serine hydroxymethyltransferase n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYA7_9STRA)

HSP 1 Score: 703 bits (1815), Expect = 1.130e-251
Identity = 345/471 (73.25%), Postives = 387/471 (82.17%), Query Frame = 0
Query:   12 GNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKE 482
            G  +LE HDP LFDLIE+EK+RQW SLELIASENFTS+AVMDCLGSALTNKYAEGLP ARYYGGNE+VDQ+E LCQKRAL AYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRV PETGLID++ LA  A LFKPAM+I GGSAYPRD+DY KF+EIADANG+ L+ DMAH SGLV T+E ASPFE CDVVTTTTHKSLRGPRAG+IF+RK              DER F  +IN AVFPALQGGPHEHQIAGVATQL E MTPEFK Y  QVK NA A A+ L   GY++ +GGTENHL+LWDL+P+ +TGSK EK CD V ITLNKN V GDRSAV+PGG R+G PALT+R M E +F +IA F+  A +I+LKIQE +GK LKDF+  L+ NEE+K L   V  FA  +PMPGF+  E+K+K+
Sbjct:   11 GLVSLEDHDPELFDLIEQEKSRQWRSLELIASENFTSKAVMDCLGSALTNKYAEGLPHARYYGGNEVVDQVEELCQKRALAAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVHPETGLIDYDQLATNAALFKPAMIIAGGSAYPRDYDYAKFKEIADANGALLMMDMAHTSGLVATEELASPFEHCDVVTTTTHKSLRGPRAGMIFFRK--------------DERGFESRINQAVFPALQGGPHEHQIAGVATQLKEVMTPEFKVYSQQVKSNAKALADKLTSLGYSMASGGTENHLVLWDLKPKGITGSKFEKTCDAVCITLNKNCVPGDRSAVTPGGVRIGAPALTTRKMVEADFEQIAMFLHEALEISLKIQEKTGKKLKDFIPELDNNEEIKTLRSKVNAFATTFPMPGFDPKEMKYKD 467          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A5A8DGJ8_CAFRO (Serine hydroxymethyltransferase n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DGJ8_CAFRO)

HSP 1 Score: 702 bits (1812), Expect = 3.490e-251
Identity = 339/473 (71.67%), Postives = 388/473 (82.03%), Query Frame = 0
Query:    7 PSKLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETS-GKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSEL 478
            P+ LPGN AL+ HDP +F+LIE+EK RQW SLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNE+VD++E LCQ RAL+AYGL+P++WGVNVQPYSGSPANFAVYT LL+PHDRIMGLDLPSGGHLTHGFYTYSKKEGTRK+VSATS+YFESLPYRVS ETGLID E L   A LFKPAM++CGGSAYPRDWDY KFREIAD NGS L+CDMAHISGLV TKEA  PFEFCD+VTTTTHKSLRGPRAG+IF+RK              D R F PKIN AVFP+LQGGPHEHQIAG+ATQL E M+ EFK YI QVK NA A  E LV+ GYTL TGGT+NHLLLWDLRP+ +TGSK+EK+CD   IT+NKN+V GDRSA+SPGG R+GTPALT+RG  E +F  +ADF+ R+ QI L++Q  +  K L DFV   +G+EE+  L +DV  FA R+ MPG+   E+
Sbjct:   14 PATLPGNVALKEHDPEMFELIEREKNRQWKSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEVVDEVERLCQSRALKAYGLNPDEWGVNVQPYSGSPANFAVYTALLKPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKSVSATSIYFESLPYRVSSETGLIDFESLEHTAALFKPAMLVCGGSAYPRDWDYAKFREIADKNGSLLMCDMAHISGLVATKEARDPFEFCDIVTTTTHKSLRGPRAGMIFFRK--------------DARGFEPKINFAVFPSLQGGPHEHQIAGIATQLKEVMSDEFKAYIRQVKANARAIGEALVEHGYTLATGGTDNHLLLWDLRPQGITGSKIEKLCDAACITVNKNSVYGDRSAMSPGGVRIGTPALTTRGFTEADFRAVADFLHRSVQIGLRMQAAAPSKRLDDFVKLFDGDEELATLRKDVNAFASRFAMPGWTKDEM 472          
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Match: A0A421GFT4_9STRA (Serine hydroxymethyltransferase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GFT4_9STRA)

HSP 1 Score: 702 bits (1813), Expect = 3.820e-251
Identity = 340/475 (71.58%), Postives = 388/475 (81.68%), Query Frame = 0
Query:   10 LPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRAVMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEKWGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKEGTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSAYPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTTTHKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQGGPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTGGTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCRVGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEGNEEVKALGEDVKEFARRWPMPGFEVSELKFKEMD 484
            LPGN  LE  DP +F+LIE EK RQW  LELIASENFTSRAVMDCLGS LTNKYAEGLP ARYYGGNEI+DQIE+LCQ RAL+AYGLD +KWGVNVQPYSGSPANFAVYT LLRPHDRIMGLDLPSGGHLTHGFYTYSK E TRKAVSATSVYFESLPYRVS +TGLID E LA  A LFKPAM++CGGSAYPRDWDY  FR+IAD NG+ L+CDMAH SGLVVT E ASPF++CDVVTTTTHKSLRGPRAG+IF+R+              DER F P+INNAVFPALQGGPHEHQIAG+A QL E  T EFK Y+ Q+K NA   A  L +KGY++CTGGT+NHL+LWDLRP+ +TGSK+EK+CD V ITLNKNAV GDRSA++PGG RVGTPALTSRG KE EF K+A+F+DRA ++ ++IQ TSGK L DFV A + +E VK L  +V   A  + MPGF+VSE++ K ++
Sbjct:   28 LPGNATLEQQDPEIFNLIEAEKNRQWKCLELIASENFTSRAVMDCLGSCLTNKYAEGLPNARYYGGNEIIDQIETLCQNRALQAYGLDADKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGFYTYSKAEKTRKAVSATSVYFESLPYRVSADTGLIDFEKLAEQAALFKPAMIVCGGSAYPRDWDYAAFRKIADDNGALLMCDMAHYSGLVVTGEHASPFDYCDVVTTTTHKSLRGPRAGMIFFRR--------------DERGFEPRINNAVFPALQGGPHEHQIAGIAAQLKEVQTEEFKTYVKQLKANAKILANTLTEKGYSMCTGGTDNHLILWDLRPQGVTGSKLEKLCDMVSITLNKNAVLGDRSALTPGGVRVGTPALTSRGFKEAEFVKVAEFLDRAVKLCVEIQSTSGKKLVDFVKAADVHEGVKQLRREVNGLATSFEMPGFKVSEMRNKTIE 488          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.67.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD6_ECTSI5.550e-30984.95Serine hydroxymethyltransferase n=2 Tax=Ectocarpus... [more]
A0A836CHR3_9STRA8.160e-27677.41Glycine hydroxymethyltransferase n=2 Tax=Tribonema... [more]
A0A6V3AI80_HETAK1.450e-25772.38Serine hydroxymethyltransferase n=1 Tax=Heterosigm... [more]
A0A7S2MVH6_9STRA3.860e-25674.11Serine hydroxymethyltransferase n=1 Tax=Helicothec... [more]
A0A1E7EPI0_9STRA7.530e-25473.04Serine hydroxymethyltransferase n=1 Tax=Fragilario... [more]
A0A7S4IQ68_9STRA1.310e-25373.31Serine hydroxymethyltransferase n=1 Tax=Odontella ... [more]
A0A5D6XJP3_9STRA6.510e-25371.67Serine hydroxymethyltransferase n=1 Tax=Pythium br... [more]
A0A7R9WYA7_9STRA1.130e-25173.25Serine hydroxymethyltransferase n=2 Tax=Craspedost... [more]
A0A5A8DGJ8_CAFRO3.490e-25171.67Serine hydroxymethyltransferase n=2 Tax=Cafeteria ... [more]
A0A421GFT4_9STRA3.820e-25171.58Serine hydroxymethyltransferase n=2 Tax=Phytophtho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001085Serine hydroxymethyltransferasePIRSFPIRSF000412SHMTcoord: 2..477
e-value: 2.2E-170
score: 564.7
IPR001085Serine hydroxymethyltransferasePANTHERPTHR11680SERINE HYDROXYMETHYLTRANSFERASEcoord: 12..481
IPR001085Serine hydroxymethyltransferaseHAMAPMF_00051SHMTcoord: 15..472
score: 40.88895
IPR001085Serine hydroxymethyltransferaseCDDcd00378SHMTcoord: 17..448
e-value: 0.0
score: 575.305
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 45..327
e-value: 2.7E-200
score: 667.3
IPR039429Serine hydroxymethyltransferase-like domainPFAMPF00464SHMTcoord: 16..423
e-value: 3.0E-173
score: 576.0
IPR015422Pyridoxal phosphate-dependent transferase, small domainGENE3D3.90.1150.10Aspartate Aminotransferase, domain 1coord: 20..471
e-value: 2.7E-200
score: 667.3
NoneNo IPR availablePIRSRPIRSR000412-50PIRSR000412-50coord: 14..473
e-value: 2.9E-157
score: 521.4
NoneNo IPR availablePANTHERPTHR11680:SF11SERINE HYDROXYMETHYLTRANSFERASEcoord: 12..481
IPR019798Serine hydroxymethyltransferase, pyridoxal phosphate binding sitePROSITEPS00096SHMTcoord: 245..261
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 10..473

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:679192..689517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.67.3mRNA_A-nodosum_M_contig96.67.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 679192..690277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.67.3 ID=prot_A-nodosum_M_contig96.67.3|Name=mRNA_A-nodosum_M_contig96.67.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=486bp
MAPTEVPSKLPGNTALEHHDPVLFDLIEKEKTRQWSSLELIASENFTSRA
VMDCLGSALTNKYAEGLPGARYYGGNEIVDQIESLCQKRALEAYGLDPEK
WGVNVQPYSGSPANFAVYTGLLRPHDRIMGLDLPSGGHLTHGFYTYSKKE
GTRKAVSATSVYFESLPYRVSPETGLIDHEDLARLAGLFKPAMVICGGSA
YPRDWDYGKFREIADANGSFLLCDMAHISGLVVTKEAASPFEFCDVVTTT
THKSLRGPRAGLIFYRKAIPHTRIDFGTFSEDERDFGPKINNAVFPALQG
GPHEHQIAGVATQLLESMTPEFKEYIVQVKKNAAACAEHLVKKGYTLCTG
GTENHLLLWDLRPERLTGSKMEKICDKVHITLNKNAVQGDRSAVSPGGCR
VGTPALTSRGMKEEEFCKIADFMDRAAQIALKIQETSGKMLKDFVAALEG
NEEVKALGEDVKEFARRWPMPGFEVSELKFKEMDH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001085Ser_HO-MeTrfase
IPR015421PyrdxlP-dep_Trfase_major
IPR039429SHMT-like_dom
IPR015422PyrdxlP-dep_Trfase_small
IPR019798Ser_HO-MeTrfase_PLP_BS
IPR015424PyrdxlP-dep_Trfase