prot_A-nodosum_M_contig96.53.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.53.2
Unique Nameprot_A-nodosum_M_contig96.53.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length183
Homology
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BLAST of mRNA_A-nodosum_M_contig96.53.2 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 7.330e-81
Identity = 123/170 (72.35%), Postives = 146/170 (85.88%), Query Frame = 0 
Query:    7 LAHNPVPGASSFTEACYGANFGFLYMMSGGNIFVPIVAHIVYDLLTFLEVHNRATAQLQVTLKGRLPEDRKLQANVKKVTRDFKLPEKFVDMSYAVFKQLDLDANGAIDQQELQLGLRTFGKFASDEETRQIMQKADLDENNALTFDEWVRLLALNYGALLKAINSEKLG 176
            LAH+PVPGASSFTEACYGANFG LYMMSGGN+ VPI+AH++YD+LTFLEVH RATAQL+ TL+G LP+  + + NV  V + F L +KFVDMSY +F+QLDLD NG IDQ+ELQLGLRTFGKFAS EETRQIM++ADLD+NNALTFDEWVRLLALNY ALL+    +++G
Sbjct:  221 LAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQPKAGKQIG 390
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BLAST of mRNA_A-nodosum_M_contig96.53.2 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 8.360e-41
Identity = 79/165 (47.88%), Postives = 111/165 (67.27%), Query Frame = 0 
Query:    7 LAHNPVPGASSFTEACYGANFGFLYMMSGGNIFVPIVAHIVYDLLTFLEVHNRATAQLQVTLKGRLPED-----------RKLQ-ANVKKVTRDFKLPEKFVDMSYAVFKQLDLDANGAIDQQELQLGLRTFGKFASDEETRQIMQKADLDENNALTFDEWVRLL 159
            LAHNPVPGASS  EA YG  FG LY+ +GGN+F PI++H +YDL TF+EVH RAT+++ V   G  P+            R LQ   V+ V + + LP  FV  +  VF  LDLD NG +D++ELQLG+RTFG+F +DE+   I ++ADL+++  ++FDE+++LL
Sbjct:  160 LAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVAAAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLL 324
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BLAST of mRNA_A-nodosum_M_contig96.53.2 vs. uniprot
Match: A0A7S1YIE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIE3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 6.460e-10
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 0 
Query:   24 GANFGFLYMMSGGNIFVPIVAHIVYDLLTFLEVHNRATAQLQVTLKGRLPEDRKLQANVKKVTRDFKLPEKFVDMSYAVFKQLDLDANGAIDQQELQLGLRTFGKFASDEETRQIMQKADLDENNALTFDEWVRLLALNYGALLKAINSEKLG 176
            GA F  LY+ S  N+ VPI+AH +YD +TF + H     Q++     +L    + +   K  T      E+FV+ +   F  +D + +G + ++EL++ L ++G   S  E+  I + ADLDE+ A+ F E++  +    G+  KA+    LG
Sbjct:  238 GAIFATLYL-STQNLAVPIIAHSLYDFVTFYKTHLDIAGQMEYASNEKLMPSTEFREEGKWKTER---SEEFVEGARETFYLMDTNKDGVLSRKELRVALFSYGINLSKMESEMIRKVADLDESGAIDFGEFLEFVGPT-GSTRKAVKYAILG 385
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.53.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LFE3_ECTSI7.330e-8172.35Abortive infection protein n=2 Tax=Ectocarpus TaxI... [more]
A0A836CHD9_9STRA8.360e-4147.88CAAX protease self-immunity-domain-containing prot... [more]
A0A7S1YIE3_9STRA6.460e-1030.72Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 98..126
e-value: 5.7
score: 11.7
coord: 134..162
e-value: 1.6
score: 16.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 100..155
e-value: 1.2E-7
score: 32.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 94..129
score: 10.440677
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 130..165
score: 10.189618
IPR002048EF-hand domainCDDcd00051EFhcoord: 101..160
e-value: 4.58754E-12
score: 56.4021
NoneNo IPR availableGENE3D1.10.238.10coord: 50..164
e-value: 9.6E-17
score: 63.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 107..119
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 143..155
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 90..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:501407..504190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.53.2mRNA_A-nodosum_M_contig96.53.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 500860..512349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.53.2 ID=prot_A-nodosum_M_contig96.53.2|Name=mRNA_A-nodosum_M_contig96.53.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=183bp
MPGCPCLAHNPVPGASSFTEACYGANFGFLYMMSGGNIFVPIVAHIVYDL
LTFLEVHNRATAQLQVTLKGRLPEDRKLQANVKKVTRDFKLPEKFVDMSY
AVFKQLDLDANGAIDQQELQLGLRTFGKFASDEETRQIMQKADLDENNAL
TFDEWVRLLALNYGALLKAINSEKLGNEPAPN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair