prot_A-nodosum_M_contig96.52.13 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.52.13
Unique Nameprot_A-nodosum_M_contig96.52.13
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length762
Homology
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BLAST of mRNA_A-nodosum_M_contig96.52.13 vs. uniprot
Match: A0A6H5K0L0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L0_9PHAE)

HSP 1 Score: 303 bits (775), Expect = 3.540e-93
Identity = 160/304 (52.63%), Postives = 195/304 (64.14%), Query Frame = 0 
Query:  260 VTIPDTQDCQYQSPVFFGYTLARNSLANANAQERDKRPTREDFISYRPGQSCPVCLVGKPGCPCCWDFPEGCSPNDFAYVGPPFKGSCRRESFRFGSPRLASPRGSCESMPPALSLTPRDGEDVCVELALPNKGRDVSMAGTVDDKRVDNPGGGK---------KGQESKQRMKSKLHTDLTTTTSISLYHRLEARTIRIFIKVIPCGTVTCIWMDISCPVSYLYDLWRMNAAEGISR------DVFMFLPTTAGQWSLDNQNLPETDTTLGVHTGNLPLSTYNLTTAKSTAVVLCTTFFSRFK 548
            +TIPD QD ++QSPVFFGY L +   +   A E  ++P REDF+ +R G+SCPVCLVGKPGCPCCWDFPEG  P+DFAY+GP    S  R + R  S      RGS  S+PP    T           A        + +G+   +RV     G          +G +S+++ K +LHTDLTT+ +I+LY  +   TIRIF+KVIPCGT TC+WMD S PVSYL+DLWR NAAEG +       D FM LPT  G W+LDN+NLPETDTTLGVHTGNLPLSTYNLTT KST  VLCTTF S+ K
Sbjct:    1 MTIPDDQDSRHQSPVFFGYDLVKKPRSKGGALEDHEKPKREDFVLHRRGKSCPVCLVGKPGCPCCWDFPEGYVPHDFAYLGPFEDSSASRPTSRRSSRSTVDGRGSVSSLPPVGDKTGSTPRTPAAAAAADRVETGAAASGSPPGRRVSLLMKGMHGVITTDKGEGADSEEKEKPELHTDLTTSAAITLYRSIVGSTIRIFVKVIPCGTATCLWMDSSWPVSYLFDLWRANAAEGCTCVFMGGIDAFMCLPTIPGLWNLDNRNLPETDTTLGVHTGNLPLSTYNLTTPKSTVTVLCTTFLSKIK 304
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BLAST of mRNA_A-nodosum_M_contig96.52.13 vs. uniprot
Match: D8LFE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE7_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 5.990e-80
Identity = 159/301 (52.82%), Postives = 197/301 (65.45%), Query Frame = 0 
Query:   26 DSVDAVEWNRQTRTRTSGGRRVLNEVYSKAELKKREAFILSQRDHAKATRRAQAKAIKATARAAAKETQKFEADLSGAGTWDASQRSVELARLGIEDCDLIDSKARKRPRPEDINHPALLGYFLRRRSARKTWDSTVHSPVFFGVLSVPLTRSETSRSNDNLSALKGLANGVAF--RPAEGKELD----GRNGARPYSRERCCLMFPLAPVTRGGVRQRLREVGETYDRAGVVHPSCFGLVTIPDTQDCQYQSPVFFGYTLARNSLANANAQERDKRPTREDFISYRPGQSCPVCLVGKPG 320
            D+V      ++TR R    RR ++  Y++  L +R A +LSQRD  KA +RAQ KAIKA       ET KFE +L GAG W +S+RSVELA+LG+EDC     +  KRP PEDI HPA LGYF +RRS +  WD  + SPVFFG LS  LTR E  R   NL+ALK L +G +F  R ++G+       G+N + P S    C  FPLAP TRG VRQRLREVG TYD AG+VHPSCFGL+TIPD QD ++QSPVFFGY L +   +   A E  ++P REDF+ +R G+ CPVCLVGKPG
Sbjct:  412 DTVSMGGAGKRTRRRRRQPRRQVD--YAEEALTERMAHLLSQRDRTKAIKRAQQKAIKAKLAEMMYETHKFEEELGGAGQWGSSKRSVELAKLGLEDC--RSGQVGKRPHPEDI-HPAFLGYFHQRRSPKGAWDPALRSPVFFGKLSEALTRREAVRGEGNLAALKALMSGASFDRRSSQGEARQEASVGQNNSSPCS---TCQAFPLAPATRGKVRQRLREVGTTYDSAGLVHPSCFGLMTIPDDQDSRHQSPVFFGYDLVKKPRSRGGALEDHEKPKREDFVVHRKGKPCPVCLVGKPG 704
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.52.13 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0L0_9PHAE3.540e-9352.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFE7_ECTSI5.990e-8052.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..423
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 660..699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:489115..500286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.52.13mRNA_A-nodosum_M_contig96.52.13Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 488433..503740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.52.13 ID=prot_A-nodosum_M_contig96.52.13|Name=mRNA_A-nodosum_M_contig96.52.13|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=762bp
MEDEIEDGSGEREKLACGTRAEGAPDSVDAVEWNRQTRTRTSGGRRVLNE
VYSKAELKKREAFILSQRDHAKATRRAQAKAIKATARAAAKETQKFEADL
SGAGTWDASQRSVELARLGIEDCDLIDSKARKRPRPEDINHPALLGYFLR
RRSARKTWDSTVHSPVFFGVLSVPLTRSETSRSNDNLSALKGLANGVAFR
PAEGKELDGRNGARPYSRERCCLMFPLAPVTRGGVRQRLREVGETYDRAG
VVHPSCFGLVTIPDTQDCQYQSPVFFGYTLARNSLANANAQERDKRPTRE
DFISYRPGQSCPVCLVGKPGCPCCWDFPEGCSPNDFAYVGPPFKGSCRRE
SFRFGSPRLASPRGSCESMPPALSLTPRDGEDVCVELALPNKGRDVSMAG
TVDDKRVDNPGGGKKGQESKQRMKSKLHTDLTTTTSISLYHRLEARTIRI
FIKVIPCGTVTCIWMDISCPVSYLYDLWRMNAAEGISRDVFMFLPTTAGQ
WSLDNQNLPETDTTLGVHTGNLPLSTYNLTTAKSTAVVLCTTFFSRFKTK
KNIERYLVFEIGVGGETSMEIFNHLVGCPKHPEDDPIQKSLCSVMEEKMR
LAQQKAVDEDGPRAELSRLNNLLFEAEKARKESAIAVKRRQVAYGSKESR
TGRRTIRRNKSAANTFQSVSTESERGVYGSTGRKSTRSRHSTGATHRPSY
QSLESKIDESGVKLINKGGHIFQGVDSGVASSIRGSIPRLKSIYRRENTT
QEMVPALTLKW*
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