prot_A-nodosum_M_contig96.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.24.1
Unique Nameprot_A-nodosum_M_contig96.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length254
Homology
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: D7FHQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ0_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 1.300e-99
Identity = 146/188 (77.66%), Postives = 166/188 (88.30%), Query Frame = 0
Query:    1 MMALGYAGHPGIPMMMPGMGWAVR-PFSHEEHTTFLDAMERYGQENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIEIAIPMEVKYRPPKPGKSLLAKVAQKSTSSVNKPRG 187
            MM  GY GHPG+P M PG GWA+R PF+HEEH+ FLDAMERYGQENTG EW++I+QAVGN RT  EVRMHAHEYFV+LQMVTQ EPD RVLG+KIK++DWT+EQDMVFEHAMAEFEETD LRWLKVASLLPGK+H+DVRHRYQRLVYDVHKIE A+PM+VKY+ PK GKSLLAKVA KS S+ ++ RG
Sbjct:    1 MMPPGYGGHPGMPPMQPGTGWALRKPFTHEEHSAFLDAMERYGQENTGSEWDKISQAVGNGRTVHEVRMHAHEYFVNLQMVTQMEPDARVLGSKIKRDDWTFEQDMVFEHAMAEFEETDSLRWLKVASLLPGKSHEDVRHRYQRLVYDVHKIENAVPMDVKYKAPKGGKSLLAKVAAKSGSASSRGRG 188          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A6H5K4R8_9PHAE (Myb-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R8_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 1.100e-68
Identity = 133/251 (52.99%), Postives = 152/251 (60.56%), Query Frame = 0
Query:    1 MMALGYAGHPGIPMMMPGMGWAVRPFSHEEHTTFLDAMERYGQENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIEIAIPMEVKYRPPKPGKSLLAKVAQKSTSSVNKPRGMSINGVTGGILFMGRDGAEAATGLNPGKPSKTKLALMRLEELEKEVKPSKPFKTKIKGKGGGYI 251
            MM  GY GHPG+P M PG GWA+R                               AVGN RT  EVRMHAHEYFV+LQM+   EPD RVLG+KIK++DWT+EQDMVFEHAMAEFEETD LRWLKVASLLPGK+H+DVRHRYQRLVYDVHKIE A+PM+VKY+ PK GKSLLAKVA KS S+ ++ R                       G   G+                E KP    KTK+KGKGGGY+
Sbjct:    1 MMPPGYGGHPGMPPMQPGTGWALR-------------------------------AVGNGRTVHEVRMHAHEYFVNLQMM---EPDARVLGSKIKRDDWTFEQDMVFEHAMAEFEETDSLRWLKVASLLPGKSHEDVRHRYQRLVYDVHKIENAVPMDVKYKAPKGGKSLLAKVAAKSGSASSRGRXXXXX-----XXXXXXXXXXXXXGAGGGR----------------EAKPKGIQKTKVKGKGGGYL 196          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A836CHK7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 9.130e-34
Identity = 67/138 (48.55%), Postives = 96/138 (69.57%), Query Frame = 0
Query:   25 PFSHEEHTTFLDAMERYGQENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIEIAIPMEVKYR 162
            PFS EEH  FL+A+E YG+ NTG EW+QI  A+G  R  QEV +HAH+YF+ LQ +   E DG +    I   +WT+E++ VFE+ ++ F+E D  RW K+ASLLP K+ +DVR RYQ+L+YDV +IE  + + ++Y+
Sbjct:   10 PFSEEEHAAFLEALETYGEGNTGMEWQQITDAIGT-RIPQEVMLHAHQYFLRLQSMANGE-DGSMA---IDDGNWTFEEETVFENGLSTFDEDDLERWNKIASLLPEKSPEDVRRRYQKLMYDVTRIEAGMQVSLEYK 142          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A7S2HE62_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HE62_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 2.940e-20
Identity = 46/130 (35.38%), Postives = 84/130 (64.62%), Query Frame = 0
Query:   24 RPFSHEEHTTFLDAMERYGQENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIEI 153
            +PF+ EEH +F  ++ +      G EWE+I++ +   R+++EV +HA+ Y V+LQ +   +     L  ++  + W+ E++++FE ++A F+E DP RW K+ASL P KN  +V  RYQ L++D+++I++
Sbjct:   10 QPFTSEEHQSFTSSLHKIDGSFEGDEWEKISRTL-ESRSSKEVMIHAYRYLVALQAMVPRDVV-HSLSEELTGDLWSLEEELIFEQSIAVFQEDDPKRWEKIASLFPKKNAQEVELRYQNLLFDINRIQL 137          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A7S4D6G4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D6G4_HETAK)

HSP 1 Score: 93.6 bits (231), Expect = 1.180e-18
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 0
Query:   35 LDAMERYG--QENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIEIAIPMEVKYRPPK 165
            ++A+ER    +E     W ++++A+   RT  EV++HAH+YF+ LQ  TQ           +    WT E+D++FEH +A F E D  RW K+  LLP K  D +R RYQ+L++DV +IE    + + ++P K
Sbjct:    1 MEALERCADNEETKNNMWGELSKALN--RTIHEVQLHAHQYFLRLQAETQGSAPKTSFMGPLDDGTWTKEEDVMFEHGVATFNEGDEERWAKIQKLLPSKTEDQIRKRYQKLLFDVSRIECGHQVVITFKPSK 131          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: K3X5K6_GLOUD (Myb-like domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5K6_GLOUD)

HSP 1 Score: 85.9 bits (211), Expect = 4.360e-16
Identity = 52/144 (36.11%), Postives = 69/144 (47.92%), Query Frame = 0
Query:   13 PMMMPGMGWAVRPFSHEEHTTFLDAMERYGQENTGRE---WEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLR-WLKVASLLPGKNHDDVRHRYQRLVYDVHKIE 152
            P   P    A  P++ +EH  FL  +E YG   T      W+ I  AV   R   +V+ HA  YF+ LQM    +    V  T+ +   WT E+D  FE  +A          W  +A+ LPGK H D R RYQ+L YDV +IE
Sbjct:   15 PATSPAFRVATAPWTEDEHRRFLAGLETYGSGQTANPQAAWQSITAAV-RTRPIHDVKAHARRYFLELQMANTRKRKEDVAATQSQDSRWTLEEDARFEELLAYHSSASVCYPWDAIAAKLPGKTHRDARERYQKLCYDVARIE 157          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A2D4C2G6_PYTIN (Tripeptidyl-peptidase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C2G6_PYTIN)

HSP 1 Score: 84.0 bits (206), Expect = 1.090e-14
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 0
Query:   16 MPGMGWAVRPFSHEEHTTFLDAMERYG---QENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHKIE 152
            +P    A  P+S +EH  FL A+E+YG     +    W  IA AVG  RT QEV  HA+ Y+  LQ V  AE     L  +     WT E+D   E  +A+  +     W ++A+ +PGK+  D+R RYQ+L YDV +IE
Sbjct: 1168 VPSTQQASGPWSQQEHERFLSALEKYGCGQSTSVFAVWHAIAAAVGT-RTLQEVNAHANWYYQQLQTVN-AERRKEYLAMQQVDTRWTIEEDATLEALLAQHCDGVTYPWERMAARMPGKSAQDLRERYQKLCYDVARIE 1305          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: D0N1B4_PHYIT (Myb-like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N1B4_PHYIT)

HSP 1 Score: 75.9 bits (185), Expect = 1.650e-12
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   25 PFSHEEHTTFLDAMERYGQ---ENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLR-WLKVASLLPGKNHDDVRHRYQRLVYDVHKIE 152
            P++  EH  FL A+E++G     + G+ W+ I  AVG  R T +V  HA  YF  LQ +   +   + L  ++ +  WT E+D  FE+ +A +  T     W  +AS LPGK+  D++ R+Q+L YDV +IE
Sbjct:   23 PWAAHEHQRFLLALEQFGGGQCSSIGQAWQSITTAVGT-RDTAQVIYHARLYFAQLQYLNIQKRQEQQLMQRVDQR-WTQEEDAAFENMLAAYSSTSVCYPWETMASRLPGKSPVDLKERFQKLCYDVARIE 152          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: H3GQM1_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQM1_PHYRM)

HSP 1 Score: 77.0 bits (188), Expect = 2.240e-12
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 0
Query:   25 PFSHEEHTTFLDAMERYGQE---NTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLR-WLKVASLLPGKNHDDVRHRYQRLVYDVHKIEIA--IPMEVKYRPPKPGKSLLAKVA 175
            P++ +EH  FL A+E++G     + G  W  IA AVG  R T +V  HA  YF  +Q V   +   R     + +  WT E+D  FE  +A F  +     W  +AS LPGK+  D++ RYQ+L YDV +IE    + M +   P  PG  L  K A
Sbjct:  516 PWAADEHQRFLLALEQFGGGQCLSVGDAWRSIATAVGT-RDTAQVVHHARLYFAQIQQVNAHKRQERQFMQSVDQR-WTSEEDAAFESMLAAFSTSSVCYPWEVMASRLPGKSPVDLKERYQKLCYDVARIESGQHVTMHLGQFPRHPGLPLSTKAA 670          
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Match: A0A833W4S6_PHYIN (Myb-like DNA-binding domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833W4S6_PHYIN)

HSP 1 Score: 75.9 bits (185), Expect = 3.390e-12
Identity = 48/132 (36.36%), Postives = 74/132 (56.06%), Query Frame = 0
Query:   25 PFSHEEHTTFLDAMERYGQ---ENTGREWEQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWTYEQDMVFEHAMAEFEETDPLR-WLKVASLLPGKNHDDVRHRYQRLVYDVHKIE 152
            P++  EH  FL A+E++G     + G+ W+ I  AVG  R T +V  HA  YF  LQ +   +   + L  ++ +  WT E+D  FE+ +A +  T     W  +AS LPGK+  D++ R+Q+L YDV +IE
Sbjct:   23 PWAAHEHQRFLLALEQFGGGQCSSIGQAWQSITTAVGT-RDTAQVIYHARLYFAQLQYLNIQKRQEQQLMQRVDQR-WTQEEDAAFENMLAAYSSTSVCYPWETMASRLPGKSPVDLKERFQKLCYDVARIE 152          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHQ0_ECTSI1.300e-9977.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K4R8_9PHAE1.100e-6852.99Myb-like domain-containing protein n=1 Tax=Ectocar... [more]
A0A836CHK7_9STRA9.130e-3448.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2HE62_9STRA2.940e-2035.38Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S4D6G4_HETAK1.180e-1836.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
K3X5K6_GLOUD4.360e-1636.11Myb-like domain-containing protein n=1 Tax=Globisp... [more]
A0A2D4C2G6_PYTIN1.090e-1438.57Tripeptidyl-peptidase, putative n=1 Tax=Pythium in... [more]
D0N1B4_PHYIT1.650e-1236.36Myb-like domain-containing protein n=1 Tax=Phytoph... [more]
H3GQM1_PHYRM2.240e-1236.31Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A833W4S6_PHYIN3.390e-1236.36Myb-like DNA-binding domain n=1 Tax=Phytophthora i... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 95..147
e-value: 3.3E-4
score: 30.0
coord: 22..76
e-value: 0.0028
score: 26.9
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 91..145
score: 7.572692
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 25..74
e-value: 5.62921E-5
score: 37.555
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 99..145
e-value: 0.00142051
score: 33.703
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 25..73
e-value: 9.7E-7
score: 28.9
NoneNo IPR availableGENE3D1.10.10.60coord: 27..76
e-value: 2.2E-8
score: 36.1
NoneNo IPR availableGENE3D1.10.10.60coord: 92..155
e-value: 9.4E-15
score: 56.1
NoneNo IPR availablePANTHERPTHR43952:SF68MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 97..163
IPR044636Transcription factor RADIALIS-likePANTHERPTHR43952MYB FAMILY TRANSCRIPTION FACTOR-RELATEDcoord: 97..163
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 92..147
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 24..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:311030..325862 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.24.1mRNA_A-nodosum_M_contig96.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 311030..326156 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.24.1 ID=prot_A-nodosum_M_contig96.24.1|Name=mRNA_A-nodosum_M_contig96.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=254bp
MMALGYAGHPGIPMMMPGMGWAVRPFSHEEHTTFLDAMERYGQENTGREW
EQIAQAVGNCRTTQEVRMHAHEYFVSLQMVTQAEPDGRVLGTKIKKEDWT
YEQDMVFEHAMAEFEETDPLRWLKVASLLPGKNHDDVRHRYQRLVYDVHK
IEIAIPMEVKYRPPKPGKSLLAKVAQKSTSSVNKPRGMSINGVTGGILFM
GRDGAEAATGLNPGKPSKTKLALMRLEELEKEVKPSKPFKTKIKGKGGGY
ILK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR044636RADIALIS-like
IPR009057Homeobox-like_sf