prot_A-nodosum_M_contig96.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.20.1
Unique Nameprot_A-nodosum_M_contig96.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length349
Homology
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: D7FHP2_ECTSI (40S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP2_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 3.420e-187
Identity = 285/353 (80.74%), Postives = 294/353 (83.29%), Query Frame = 0
Query:   15 MASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDPAA---VSMEYQAPPAQATGLGGGWDADPAAGGEEAIPVEAAVPV-EAVPADAG---------------AXXXXXXAPQQPAVDDGGWGDASGAAAGGW 348
            MASS LPACL AKEEDI KML+AQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDR   WDVPVDLFFYREPEELEKAEEAQAPFQ+P A AA GWGA+P+   AAPTPMEGFAAVDPAA   V +EYQAPP QA  +GGGWDA PA G E+ +PVE   PV EA+P DAG               A      APQQ     GGWG A   A GGW
Sbjct:    1 MASSSLPACLHAKEEDIHKMLAAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRTVAWDVPVDLFFYREPEELEKAEEAQAPFQEPAAAAASGWGADPMAGGAAPTPMEGFAAVDPAAAAPVPVEYQAPP-QAAAMGGGWDAAPATGAEQGMPVEQVQPVAEAMPVDAGVPPAAGGGWDAQQAQAPVQQAQAPQQ--AQGGGWGGAPAQAGGGW 350          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A7S4DAK2_HETAK (40S ribosomal protein SA n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAK2_HETAK)

HSP 1 Score: 394 bits (1013), Expect = 3.180e-134
Identity = 207/275 (75.27%), Postives = 228/275 (82.91%), Query Frame = 0
Query:   20 LPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDPAAVSMEYQAPPAQATGLGGGWDADP 294
            LP  LQAKEEDIQKML+ Q HIGTRNS+++M DYIW RRQDG+H++N+GKTWEK+VLAARIIVAIENP+DVVAISARPYGQRAVLKFAQYTG  SIAGRFTPGTFTNQITKQFREPRLL+ITDPR D+QAVKEASYVNVPVIAFCDSDSPL NVDVAIP+NNKGKLSIGLLYWLLAREVLRMRGTI R  PWDVPVDLFFYR+PEELEKA+EAQA   + Q  A  GWGA P   +AAP      A + P    M+Y AP A       G++A P
Sbjct:   30 LPPILQAKEEDIQKMLAGQCHIGTRNSENKMADYIWTRRQDGVHVMNLGKTWEKIVLAARIIVAIENPEDVVAISARPYGQRAVLKFAQYTGANSIAGRFTPGTFTNQITKQFREPRLLVITDPRTDSQAVKEASYVNVPVIAFCDSDSPLPNVDVAIPANNKGKLSIGLLYWLLAREVLRMRGTISRDAPWDVPVDLFFYRDPEELEKADEAQAAAYEEQVPA--GWGAAP--EAAAPA-----AEMAP----MDYVAPDAXXXXAAAGFEAPP 291          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A836CJ71_9STRA (40S ribosomal protein SA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ71_9STRA)

HSP 1 Score: 393 bits (1009), Expect = 6.880e-134
Identity = 206/264 (78.03%), Postives = 220/264 (83.33%), Query Frame = 0
Query:   15 MASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAP----TPMEGFAAVDPAAVSM 274
            MASS LPA L  KEEDIQKMLSAQ HIGTRNSD QM+DYIWRRR DGIHILNIGKTWEKLVLAARII AIENPQDV+AISARPYGQRAVLKFAQYTG  SIAGRFTPGTFTNQITKQFREPRLLIITDPR DAQAVKE+SYVNVPVIAFCDSDSPL  VDVAIP+NNKGKLSIGLLYW+LAREVLR+RGT+ R  PWDVPVDLFF+REPEELEK E  Q  F++P A  A GW A   + +AA      P +   +V PA   M
Sbjct:    1 MASSSLPAVLAPKEEDIQKMLSAQAHIGTRNSDDQMKDYIWRRRHDGIHILNIGKTWEKLVLAARIIAAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQAVKESSYVNVPVIAFCDSDSPLNYVDVAIPANNKGKLSIGLLYWMLAREVLRLRGTVPRDAPWDVPVDLFFHREPEELEKTEAEQ--FEEPAAPTA-GWDATAGMGAAAAGDYAVPTQPLTSVTPAEAEM 261          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: F0Y9V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9V2_AURAN)

HSP 1 Score: 375 bits (962), Expect = 3.110e-128
Identity = 179/211 (84.83%), Postives = 198/211 (93.84%), Query Frame = 0
Query:   24 LQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQA 234
            L  KEEDIQKMLSAQ HIGTRNSD  M++YIWRRRQDGIHI+N+GKTWEKL+LAAR++ AIENPQD++AISARPYGQRAVLKFAQYTG  SIAGRFTPGTFTNQITKQF+EPR+L+ITDPR D+QAVKEASYVN+PVIAFCDSDSP Q+VDVAIPSNNKGKLSIGLLYWLLARE+LRMRGT+ R  PWDVPVDLFFYR+PEELEKA+EAQA
Sbjct:    2 LAPKEEDIQKMLSAQCHIGTRNSDHMMEEYIWRRRQDGIHIINVGKTWEKLMLAARVLTAIENPQDIIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFKEPRILVITDPRTDSQAVKEASYVNLPVIAFCDSDSPCQHVDVAIPSNNKGKLSIGLLYWLLAREMLRMRGTVARHAPWDVPVDLFFYRDPEELEKADEAQA 212          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A8J2SYU6_9STRA (40S ribosomal protein SA n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYU6_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.250e-127
Identity = 206/304 (67.76%), Postives = 232/304 (76.32%), Query Frame = 0
Query:    5 LLSITDEVAIMASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQA-----------------------PFQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDPAAVSMEYQAPPAQATG 285
            LL+  D+    AS+   + L  KEEDIQKML+AQ HIGTRNSD  M++YIWRRRQDG+HI+NIGKTWEKL+LAAR++ AIENPQDV+AISARPYGQRAVLKFAQYTG  SIAGRFTPGTFTNQITKQFREPR+L+ITDPR D+QAV EASYVN+PVIAFCDSDSPLQ+VDVAIPSNNKGKLSIGLLYWLLAREVLRMRGT+ R  PWDVPVDLFFYR+PEELEKAEEAQA                       P+ DP A+A  G+   P  +        GFAA  PAA   ++  P AQA G
Sbjct:   62 LLAPRDQAQANASTM--SILAPKEEDIQKMLAAQCHIGTRNSDHMMEEYIWRRRQDGVHIINIGKTWEKLMLAARVLTAIENPQDVIAISARPYGQRAVLKFAQYTGAASIAGRFTPGTFTNQITKQFREPRILVITDPRTDSQAVAEASYVNLPVIAFCDSDSPLQHVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTVSRLAPWDVPVDLFFYRDPEELEKAEEAQAFAAEQEQAQTWNASAGEAAPKEQPYSDPNAMA--GFEQAPAATG-------GFAA--PAAPEQQWD-PNAQAAG 351          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A1V9ZU98_9STRA (40S ribosomal protein SA n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZU98_9STRA)

HSP 1 Score: 373 bits (958), Expect = 1.050e-126
Identity = 192/270 (71.11%), Postives = 219/270 (81.11%), Query Frame = 0
Query:   24 LQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDPAAVSMEYQAPPAQATGLGGGWDAD 293
            L  +EEDIQKML+A VHIGTRN+D+QM DYIWRRR DGIHI+N+GKTWEKL+LAA+IIVA+ENP DV+AISARPYGQRAVLKFAQYTGC +IAGRFTPGTFTNQITKQFREPRLLIITDPR DAQ V+E++YVNVPVIAFCDSDSPL+ VDVAIP+NNKGKLSIGLLYWLL+REVLR+RGTI R  PWDV VDLFFYR+PEELEKAEEAQ    D +++A  GW  E + + AA             A ++    P A+    GG W AD
Sbjct:    2 LTQREEDIQKMLAAMVHIGTRNADAQMGDYIWRRRNDGIHIINVGKTWEKLMLAAKIIVAVENPADVIAISARPYGQRAVLKFAQYTGCQAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDAQPVRESAYVNVPVIAFCDSDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWDVAVDLFFYRDPEELEKAEEAQTGAAD-ESMARAGWTNEAVAAEAATE-----------APTLYTAEPTAEWGTAGGEWGAD 259          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A6V0ZRC8_9STRA (40S ribosomal protein SA n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A6V0ZRC8_9STRA)

HSP 1 Score: 372 bits (955), Expect = 3.450e-126
Identity = 199/285 (69.82%), Postives = 223/285 (78.25%), Query Frame = 0
Query:   15 MASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAP------FQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDP--AAVSMEYQAPPAQATGL-GGGW 290
            M+ S+LPA LQ KEEDIQ MLSA VH GTRNSDS M DYIWRRR DG+HILNIG TWEKL+LAAR+IVAIENP+DV+AISARPYG RAVLKFA YTGC SIAGRFTPGTFTNQITKQFREPRLL++TDPR D+Q+V+EASYVNVPV+AFCDSDSPLQ VDVAIP+NNKGK SIGLLYWLLARE+LR+RG++ R   WDVPVDLFF+R+ EEL+K EE QA       F+D     AP   A  +V  AAP   +   A D   AA S E  A PA A G  G GW
Sbjct:    1 MSVSHLPAILQPKEEDIQMMLSAGVHTGTRNSDSSMTDYIWRRRNDGVHILNIGATWEKLILAARVIVAIENPEDVIAISARPYGMRAVLKFAHYTGCQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQSVREASYVNVPVVAFCDSDSPLQFVDVAIPANNKGKYSIGLLYWLLAREILRLRGSVSRSSEWDVPVDLFFHRDVEELKKNEEEQAAKLEEAAFEDATPETAPAAEATNLV--AAPPAYDAPPAGDQYQAATSWEGGAEPAAAAGAEGAGW 283          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A7S2N1P7_9STRA (40S ribosomal protein SA n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1P7_9STRA)

HSP 1 Score: 370 bits (950), Expect = 6.020e-125
Identity = 184/232 (79.31%), Postives = 206/232 (88.79%), Query Frame = 0
Query:    2 LSPLLSITDEVAIMASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQ 233
            L  LLSIT  +A  AS  LP  LQ KEEDIQ MLSA VH GTRNSDS MQ+YIWRRR DGIHILNIGKTWEKL+LAAR+IVAIENP+DV+AISARPYG RAVLKFA YTG  SIAGRFTPGTFTNQITKQFREPRLL++TDPR D+QAV+E+SYVNVPVIAFCDSDSPLQ+VD+AIP+NNKGKLS+GLLYWLLAREVLR+RGT+ R   WDVPVDLFF+R+PE+L+KA+E Q
Sbjct:    4 LPSLLSITATMASFAS--LPPVLQPKEEDIQMMLSANVHQGTRNSDSAMQEYIWRRRNDGIHILNIGKTWEKLMLAARVIVAIENPEDVIAISARPYGMRAVLKFAHYTGSQSIAGRFTPGTFTNQITKQFREPRLLVVTDPRTDSQAVRESSYVNVPVIAFCDSDSPLQHVDIAIPANNKGKLSVGLLYWLLAREVLRLRGTVPRSSDWDVPVDLFFHRDPEDLKKADEEQ 233          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A0P1B4R0_PLAHL (40S ribosomal protein SA n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4R0_PLAHL)

HSP 1 Score: 368 bits (945), Expect = 1.180e-124
Identity = 190/263 (72.24%), Postives = 222/263 (84.41%), Query Frame = 0
Query:   20 LPACLQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAPTPMEG--FAAVD--PAAVSMEYQA 278
            + A    +EEDI+ ML+AQVHIGTRN+DS+M DYIWRRR DGIH++N+GKTWEKL+LAAR+IVA+ENP+DV+AISARPYGQRAVLKFAQ+TGC +IA RFTPGTFTNQITKQFREPRLLIITDPR D+QAV+E+S+VNVPVIA CDSDSPLQ VDVAIP+NNKGKLSIGLLYWLLAREVLR+RGTI R  PWDV VDLF YR+PEEL+KAEEAQA   D ++ A PGWG       A+P+P+E   +AA    PAA + E+ A
Sbjct:    1 MSAMATQREEDIKMMLAAQVHIGTRNADSKMADYIWRRRNDGIHVINVGKTWEKLMLAARVIVAVENPEDVIAISARPYGQRAVLKFAQHTGCNAIASRFTPGTFTNQITKQFREPRLLIITDPRTDSQAVRESSFVNVPVIALCDSDSPLQFVDVAIPANNKGKLSIGLLYWLLAREVLRLRGTISRALPWDVAVDLFLYRDPEELKKAEEAQAIAGD-ESQARPGWG------DASPSPVEPALYAAEPSVPAATAAEWTA 256          
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Match: A0A485LRJ6_9STRA (40S ribosomal protein SA n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LRJ6_9STRA)

HSP 1 Score: 368 bits (944), Expect = 1.360e-124
Identity = 196/279 (70.25%), Postives = 222/279 (79.57%), Query Frame = 0
Query:   24 LQAKEEDIQKMLSAQVHIGTRNSDSQMQDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQRAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAVKEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLRMRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAEPIVSSAAPTPMEGFAAVDPAAVSMEYQAPPAQATGLGGG-WDADPAAGGEEA 301
            L  +EEDIQKML+A VHIGTRN+DSQM DYIWRRR DGIHI+N+G+TWEKL+LAA++IVA+ENP DV+AISARPYGQRAVLKFAQYTGC +IAGRFTPGTFTNQITKQFREPRLLIITDPR D+Q V+E++YVNVPVIAFCD+DSPL+ VDVAIP+NNKGKLSIGLLYWLL+REVLR+RGTI R  PW+V VDLFFYR+PEEL KAEEAQ    D   VA  GW  E   ++AA T  E             Y   PA   G  GG W AD AAGG +A
Sbjct:    3 LTQREEDIQKMLAAMVHIGTRNADSQMGDYIWRRRNDGIHIINVGQTWEKLMLAAKVIVAVENPADVIAISARPYGQRAVLKFAQYTGCQAIAGRFTPGTFTNQITKQFREPRLLIITDPRTDSQPVRESAYVNVPVIAFCDTDSPLRYVDVAIPANNKGKLSIGLLYWLLSREVLRLRGTISRALPWEVAVDLFFYRDPEELAKAEEAQTGAVDE--VARAGWTNE---AAAAETATEQ---------PNLYTPEPAAEWGTAGGEWGADAAAGGWDA 267          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP2_ECTSI3.420e-18780.7440S ribosomal protein SA n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S4DAK2_HETAK3.180e-13475.2740S ribosomal protein SA n=2 Tax=Heterosigma akash... [more]
A0A836CJ71_9STRA6.880e-13478.0340S ribosomal protein SA n=1 Tax=Tribonema minus T... [more]
F0Y9V2_AURAN3.110e-12884.83Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A8J2SYU6_9STRA1.250e-12767.7640S ribosomal protein SA n=1 Tax=Pelagomonas calce... [more]
A0A1V9ZU98_9STRA1.050e-12671.1140S ribosomal protein SA n=3 Tax=Saprolegniaceae T... [more]
A0A6V0ZRC8_9STRA3.450e-12669.8240S ribosomal protein SA n=1 Tax=Thalassionema nit... [more]
A0A7S2N1P7_9STRA6.020e-12579.3140S ribosomal protein SA n=1 Tax=Helicotheca tames... [more]
A0A0P1B4R0_PLAHL1.180e-12472.2440S ribosomal protein SA n=1 Tax=Plasmopara halste... [more]
A0A485LRJ6_9STRA1.360e-12470.2540S ribosomal protein SA n=2 Tax=Aphanomyces TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001865Ribosomal protein S2PRINTSPR00395RIBOSOMALS2coord: 110..127
score: 45.04
coord: 173..187
score: 48.72
coord: 31..49
score: 32.39
coord: 152..163
score: 49.1
coord: 61..70
score: 51.85
coord: 135..152
score: 46.41
IPR001865Ribosomal protein S2PFAMPF00318Ribosomal_S2coord: 34..131
e-value: 2.5E-12
score: 46.5
IPR001865Ribosomal protein S2CDDcd01425RPS2coord: 34..200
e-value: 3.92627E-71
score: 218.22
IPR005707Ribosomal protein S2, eukaryotic/archaealTIGRFAMTIGR01012TIGR01012coord: 27..222
e-value: 1.5E-89
score: 296.6
IPR005707Ribosomal protein S2, eukaryotic/archaealPANTHERPTHR1148940S RIBOSOMAL PROTEIN SAcoord: 24..296
NoneNo IPR availableGENE3D3.40.50.10490coord: 30..235
e-value: 4.2E-99
score: 331.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..348
NoneNo IPR availablePANTHERPTHR11489:SF940S RIBOSOMAL PROTEIN SAcoord: 24..296
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00963RIBOSOMAL_S2_2coord: 135..159
IPR018130Ribosomal protein S2, conserved sitePROSITEPS00962RIBOSOMAL_S2_1coord: 31..42
IPR027498Ribosomal protein S2, eukaryoticHAMAPMF_03015Ribosomal_S2_eukcoord: 18..250
score: 52.360554
IPR023591Ribosomal protein S2, flavodoxin-like domain superfamilySUPERFAMILY52313Ribosomal protein S2coord: 26..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:304052..307096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.20.1mRNA_A-nodosum_M_contig96.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 304052..307096 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.20.1 ID=prot_A-nodosum_M_contig96.20.1|Name=mRNA_A-nodosum_M_contig96.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=349bp
LLSPLLSITDEVAIMASSYLPACLQAKEEDIQKMLSAQVHIGTRNSDSQM
QDYIWRRRQDGIHILNIGKTWEKLVLAARIIVAIENPQDVVAISARPYGQ
RAVLKFAQYTGCLSIAGRFTPGTFTNQITKQFREPRLLIITDPRPDAQAV
KEASYVNVPVIAFCDSDSPLQNVDVAIPSNNKGKLSIGLLYWLLAREVLR
MRGTIDRQQPWDVPVDLFFYREPEELEKAEEAQAPFQDPQAVAAPGWGAE
PIVSSAAPTPMEGFAAVDPAAVSMEYQAPPAQATGLGGGWDADPAAGGEE
AIPVEAAVPVEAVPADAGAGGGWDAAPQQPAVDDGGWGDASGAAAGGW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001865Ribosomal_S2
IPR005707Ribosomal_S2_euk/arc
IPR018130Ribosomal_S2_CS
IPR027498Ribosomal_S2_euk
IPR023591Ribosomal_S2_flav_dom_sf