prot_A-nodosum_M_contig96.18.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig96.18.2
Unique Nameprot_A-nodosum_M_contig96.18.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length353
Homology
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BLAST of mRNA_A-nodosum_M_contig96.18.2 vs. uniprot
Match: D7FHP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHP9_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 9.370e-50
Identity = 107/217 (49.31%), Postives = 148/217 (68.20%), Query Frame = 0 
Query:   73 MKTLLAAMGVHDVLKVKIDDGKFFGGQDLVDWLCVRLREEAFFGAAVRNELEQERANSNKAFDRLAESERNLKKRLQQKELEVEEAGKRRLEDLSEALRKQQNLRSKVEEDQEDAGREIHRLREEVSSLRERISIQDNTLATLEGECEALRSTVNTGRNVQEIDDAELREQLRDTLTRVDEVMRLKRRLYALEVDKNECSSRLDRTQREAAHFRATL 289
            M+  L+ + V DV KVKIDDG FFGGQDLV+WLC RL++E  F A VR EL+ ER  S++ FDRL+E+E+ LK  L+ K+ E+E A +RRL D +EAL  Q+ LR K     + A +EI+ L+ EVS L  RI++Q +  A +E ECEALRSTV TGR V++++D   R+ L +T+ R + ++RLKRRL+A E ++ E  +R+ R QRE    RA L
Sbjct:    1 MRKALSEIEVIDVFKVKIDDGTFFGGQDLVEWLCSRLKQELAFSAEVRKELQGERLASSREFDRLSENEKRLKNELRDKQSELETA-ERRLLDTTEALHSQKQLRMKEMLVTQGAAKEINSLQSEVSRLTNRINLQADVTAAVEKECEALRSTVRTGREVRDVEDVNFRKTLAETIKREEGMVRLKRRLHAAEAERRESEARVSRLQREMDRMRAAL 216
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig96.18.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHP9_ECTSI9.370e-5049.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..211
NoneNo IPR availableGENE3D1.20.5.1700coord: 159..234
e-value: 3.0E-5
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig96contigA-nodosum_M_contig96:286772..292657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig96.18.2mRNA_A-nodosum_M_contig96.18.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig96 285642..293403 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig96.18.2 ID=prot_A-nodosum_M_contig96.18.2|Name=mRNA_A-nodosum_M_contig96.18.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=353bp
MPRRSRCIHIFLKQEPFSPRMTLGVPRIAMPRRGGIGPRSRETVLLVYHD
DKSVDRISVSPPSHLEPEDTTTMKTLLAAMGVHDVLKVKIDDGKFFGGQD
LVDWLCVRLREEAFFGAAVRNELEQERANSNKAFDRLAESERNLKKRLQQ
KELEVEEAGKRRLEDLSEALRKQQNLRSKVEEDQEDAGREIHRLREEVSS
LRERISIQDNTLATLEGECEALRSTVNTGRNVQEIDDAELREQLRDTLTR
VDEVMRLKRRLYALEVDKNECSSRLDRTQREAAHFRATLSMREMSPPLDA
SRGSVTKATGTPAGARWQWNSGGRDQVLPPLSKYDISCGSTERPKTIWAS
RI*
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