prot_A-nodosum_M_contig958.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig958.20.1
Unique Nameprot_A-nodosum_M_contig958.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length457
Homology
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: D7FWJ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWJ1_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 1.900e-70
Identity = 273/477 (57.23%), Postives = 316/477 (66.25%), Query Frame = 0
Query:    1 MAQAVGYSGSEDRMLDSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKLARNKKGRKPGDVFSPQVEEENKERIKMMLDMGVPHANKDPEPP---------------------------------------------NGSVPPGASPRHERVGPEPRXXXXXXXXXXXXXSARSHPAPSAGSV-----YYPDPSPANSPSS-IPDTSATPLAEAMLNKTKQNDLPTGGLGNGVRGSKVDRSDELSSDGVKT------------------------------AVVQTTPSIN--GTAEMDRLKSELMTKNQELQRMNVEIDEYKKNLQKARADNTEELDNADLQ 394
            MAQAV YS SE+++LDSEQE E+DGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRN+AVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++LARNKKGRKPGDVFSP VE++ KERIK+ML MG   A+  P                                                NG VP G++     V P                SAR  PAPSA S+      YPDPSPANSPSS + +++AT ++EA+L+           +G G RG     +  + + G  T                              A VQTTP ++  G+AEM+R+K+EL  KNQ+LQ+M ++++EYK NL +A+  +T ELD+AD+Q
Sbjct:    1 MAQAVAYSASEEKILDSEQEPEMDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNSAVDPVNDLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLARNKKGRKPGDVFSPTVEDDKKERIKIMLGMGTADASAQPAAASTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSYKGNGDVP-GSTGSTAGVPPP---------AYKPPMSARPDPAPSAASLADSSYQYPDPSPANSPSSAMLNSTATVMSEAVLSTA---------VGEGGRGGGTSGATSMGNGGGLTXXXXXXXXXPKQVXXXXXXXXXXXATSRSAAGVQTTPRVDAKGSAEMNRIKAELSAKNQQLQQMQLKVEEYKDNLHQAQTTSTRELDDADVQ 458          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A835Z0Q5_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 4.530e-25
Identity = 54/65 (83.08%), Postives = 57/65 (87.69%), Query Frame = 0
Query:   26 VDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQ 90
            VDPWKAA  GDLDA+L YID+ GDVN RD +NNTPLHWACQESHFDIVGVLMSR A VDPVNDLQ
Sbjct:    4 VDPWKAATSGDLDAILTYIDEGGDVNCRDVNNNTPLHWACQESHFDIVGVLMSRGAHVDPVNDLQ 68          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A836C8I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I0_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.370e-21
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 0
Query:   25 GVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMS 78
            G+DPWKAA  GDLDA+L +ID+ GDVN RD +NNTPLHWACQESHFDIVGVLMS
Sbjct:    7 GIDPWKAATAGDLDAILTFIDEGGDVNCRDANNNTPLHWACQESHFDIVGVLMS 60          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: Q4L0H4_AGAAM (Membrane acyl-CoA binding protein n=1 Tax=Agave americana TaxID=39510 RepID=Q4L0H4_AGAAM)

HSP 1 Score: 58.2 bits (139), Expect = 1.400e-5
Identity = 26/66 (39.39%), Postives = 43/66 (65.15%), Query Frame = 0
Query:   16 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 81
            +S+ + ++D +     A +G+ D LL++I++   VN RD +  TPLHWA    HF++V +L+SRNA
Sbjct:  220 ESDNDLKLDAI--HACAREGEADNLLRHIENGVPVNSRDSEGRTPLHWAVDRGHFNVVEILLSRNA 283          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A1U8AW91_NELNU (acyl-CoA-binding domain-containing protein 1 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AW91_NELNU)

HSP 1 Score: 58.2 bits (139), Expect = 1.420e-5
Identity = 28/66 (42.42%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   16 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 81
            +SE+E ++D +    +A +G++D LL+Y+D+   V+ RD +  TPLHWA    H +IV +L+SRNA
Sbjct:  239 ESEKELKMDAI--HASAREGEMDNLLKYMDNGVPVDLRDGEGRTPLHWAVDRGHLNIVELLVSRNA 302          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A7J6WHB3_THATH (Acyl-coa-binding domain-containing protein n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WHB3_THATH)

HSP 1 Score: 56.6 bits (135), Expect = 4.220e-5
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   16 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 81
            DS  EA+++ +   + A +G++D L +YI D   VN +D +  TPLHWA    H +IV +L+S+NA
Sbjct:  224 DSHSEAKLEAI--HECAREGEIDNLHKYIGDGESVNLKDSEGRTPLHWAVDRGHSNIVELLLSKNA 287          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A2G5DZE2_AQUCA (ACB domain-containing protein n=1 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5DZE2_AQUCA)

HSP 1 Score: 55.8 bits (133), Expect = 6.620e-5
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   16 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVD 84
            DS  E +++ +  +  A +G++D L ++I D   VN +D +  TPLHWA    H DIV +L+S+NA V+
Sbjct:  248 DSHSETKLEAIHEF--AREGEIDNLHKHIGDGESVNLKDSEGRTPLHWAVDRGHSDIVELLLSKNADVN 314          
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Match: A0A1D1YME2_9ARAE (Acyl-CoA-binding domain-containing protein 2 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YME2_9ARAE)

HSP 1 Score: 55.5 bits (132), Expect = 9.950e-5
Identity = 27/66 (40.91%), Postives = 42/66 (63.64%), Query Frame = 0
Query:   16 DSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDVNQRDRDNNTPLHWACQESHFDIVGVLMSRNA 81
            +S +E ++D +  +  A +G+ DALL  +D+   VN RD +  TPLHWA    HF+IV +L+S+ A
Sbjct:  234 ESNKELKLDAIHVF--AREGEADALLAQLDNAVSVNLRDSEGRTPLHWAVDRGHFNIVEILISKGA 297          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig958.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FWJ1_ECTSI1.900e-7057.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0Q5_9STRA4.530e-2583.08Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A836C8I0_9STRA6.370e-2179.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
Q4L0H4_AGAAM1.400e-539.39Membrane acyl-CoA binding protein n=1 Tax=Agave am... [more]
A0A1U8AW91_NELNU1.420e-542.42acyl-CoA-binding domain-containing protein 1 n=1 T... [more]
A0A7J6WHB3_THATH4.220e-540.91Acyl-coa-binding domain-containing protein n=1 Tax... [more]
A0A2G5DZE2_AQUCA6.620e-539.13ACB domain-containing protein n=1 Tax=Aquilegia co... [more]
A0A1D1YME2_9ARAE9.950e-540.91Acyl-CoA-binding domain-containing protein 2 n=1 T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 349..447
NoneNo IPR availableGENE3D1.10.287.1490coord: 343..452
e-value: 3.1E-5
score: 25.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 275..309
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..334
NoneNo IPR availablePANTHERPTHR24134ANKYRIN REPEAT-CONTAINING PROTEIN DDB_G0279043coord: 30..126
coord: 125..356
coord: 91..196
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 56..84
score: 9.914011
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 89..121
score: 10.471169
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 122..154
score: 12.514086
NoneNo IPR availableCDDcd00890Prefoldincoord: 347..444
e-value: 5.11486E-5
score: 40.7769
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 171..185
score: 39.73
coord: 90..105
score: 38.39
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 56..85
e-value: 0.023
score: 23.9
coord: 155..184
e-value: 0.052
score: 22.7
coord: 122..151
e-value: 0.0018
score: 27.5
coord: 89..118
e-value: 6.7E-4
score: 29.0
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 120..185
e-value: 4.4E-10
score: 40.0
coord: 31..119
e-value: 5.4E-13
score: 49.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 89..121
score: 11.8347
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 56..88
score: 11.22037
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 122..154
score: 13.89137
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 155..187
score: 9.61777
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 9..126
e-value: 2.3E-29
score: 104.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 127..213
e-value: 4.9E-21
score: 76.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 30..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig958contigA-nodosum_M_contig958:198240..217145 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig958.20.1mRNA_A-nodosum_M_contig958.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig958 198240..218629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig958.20.1 ID=prot_A-nodosum_M_contig958.20.1|Name=mRNA_A-nodosum_M_contig958.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=457bp
MAQAVGYSGSEDRMLDSEQEAEIDGVDPWKAAMQGDLDALLQYIDDNGDV
NQRDRDNNTPLHWACQESHFDIVGVLMSRNAAVDPVNDLQSTPLHYACRE
GNLDIVTGLINFNANLEARNKDNLSPLHVAAGMGHIEVTKRLLDNGAQME
AKDNALYTPLWRASYYGHPEVVEVLLLKGADKLARNKKGRKPGDVFSPQV
EEENKERIKMMLDMGVPHANKDPEPPNGSVPPGASPRHERVGPEPRGPAA
EPPPYKPPVSARSHPAPSAGSVYYPDPSPANSPSSIPDTSATPLAEAMLN
KTKQNDLPTGGLGNGVRGSKVDRSDELSSDGVKTAVVQTTPSINGTAEMD
RLKSELMTKNQELQRMNVEIDEYKKNLQKARADNTEELDNADLQMQELNQ
RVVKAEKELDRKRGEVVEARKEVEDATRRAEDRIAQLEQDLQAARSSSGG
CSCTIS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf