prot_A-nodosum_M_contig9579.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9579.3.1
Unique Nameprot_A-nodosum_M_contig9579.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length54
Homology
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BLAST of mRNA_A-nodosum_M_contig9579.3.1 vs. uniprot
Match: A0A6H5J7E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7E3_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 6.640e-9
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   17 LRELSEKHGILVKFVDDGDASGVAQVEALAKAHGICI 53
            +R L+EKHGI+V+FVDDG ASGV+QV ALA+AHGI I
Sbjct:  318 IRNLAEKHGIVVRFVDDGAASGVSQVRALARAHGIRI 354
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9579.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J7E3_9PHAE6.640e-972.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9579contigA-nodosum_M_contig9579:6266..6427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9579.3.1mRNA_A-nodosum_M_contig9579.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9579 6266..6427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9579.3.1 ID=prot_A-nodosum_M_contig9579.3.1|Name=mRNA_A-nodosum_M_contig9579.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=54bp
HGEPTGTQGVRGMEECLRELSEKHGILVKFVDDGDASGVAQVEALAKAHG
ICIR
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