prot_A-nodosum_M_contig954.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig954.20.1
Unique Nameprot_A-nodosum_M_contig954.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length481
Homology
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: D7FVN6_ECTSI (Guanyl nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVN6_ECTSI)

HSP 1 Score: 681 bits (1757), Expect = 1.220e-240
Identity = 352/616 (57.14%), Postives = 410/616 (66.56%), Query Frame = 0
Query:    1 MSKKGKEARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGNPQ----------------------------------------------LGLGKVDEGVYCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVK------------------------------------------------------------------------------------------VEVFGTEGGRRMAGKVTQCSAGKYVTTAVMAAADDPRDVDLAYKRAVQADAFNAEVLRQLETFFGAYDQWGRGDVMQVG 480
            M +KGK    ++LRLEIE+MW PLREIQ +DAA K+ + EAG G+ +   E +Y  WRE + KARD+A PVFTPRGNSLQ++LGG+T+RA ++++PRANDAA+ +SAGANHVLLVHRSGQLYTWGVGASGRLGLDL+QGGNPQ                                              LGLG VD  VYCSVPTRVM+ S +KVKEISCGAAHTACVTASG LF+WGCGDGGRLGLGEERLGPQ+EPVLVE+LA  G+++ +VSCGN+HTLALTAVRE   GEG  R K  +GGR++QAGSTNVLGTFCPAF P   +D+V V+QVSAGY HSCCCT +GELYTWG+NRDGCLGLPR+TKFA+ PQLV+CLY  P NLA+GRP+RQSSVYD L + +AVDGDRSGD YRKCSCTQQDPQGWWEVD+G+LV++H+VK                                                                                          VEVFGT G RR  GKVT C AGKYVTTAVMAA  D  DV+  YKRAVQADAFNAEVLR+ ETFF AYDQWGRGD +++G
Sbjct:    1 MYEKGKNVMGKSLRLEIEEMWAPLREIQAEDAAIKKANEEAGLGSQYARGEHVYSQWRERMAKARDDASPVFTPRGNSLQVNLGGITERAAEMRSPRANDAAVAISAGANHVLLVHRSGQLYTWGVGASGRLGLDLSQGGNPQADAAAATVIQAFSGRPVLRASAGYNHSSAITTSGRVYTWGSAATGKLGLGMVDRDVYCSVPTRVMVDSPTKVKEISCGAAHTACVTASGHLFIWGCGDGGRLGLGEERLGPQYEPVLVESLATGGQRIGAVSCGNSHTLALTAVREAHEGEGEGRAKALRGGRVYQAGSTNVLGTFCPAFKPTMGLDEVMVKQVSAGYGHSCCCTMDGELYTWGSNRDGCLGLPRSTKFANFPQLVTCLYVSPKNLAMGRPSRQSSVYDGLSAGMAVDGDRSGDHYRKCSCTQQDPQGWWEVDLGQLVHVHQVKIWNRCDEPKDPSMERNFYAKRLFPCWVMASQEPFKDDVGGAALLDAMNTAVARAHFKEEQRCLVWRCPDQTMARYVRVQLQGFDFLHMAQVEVFGTTGARRSPGKVTHCCAGKYVTTAVMAAMQDSADVETVYKRAVQADAFNAEVLREFETFFAAYDQWGRGDAIKLG 616          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A836CBD3_9STRA (Guanyl nucleotide exchange factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBD3_9STRA)

HSP 1 Score: 343 bits (879), Expect = 2.230e-108
Identity = 200/464 (43.10%), Postives = 256/464 (55.17%), Query Frame = 0
Query:    1 MSKKGKEARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSL-----------QLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGNPQ----------------------------------------------LGLGKVDEGVYCSVPTRVMLGSISK--VKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQ-FEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRK--QGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            M+KKG+    ++LRLE+E MW PL EI+ +DAA  R   EA     +  AE  Y+ WR  I   R +      P G  L           QL+L GLT+RAG   TPR   A + ++AGANH LL+HR+GQLY+WG+G SGRLGLD++ GG PQ                                              LG+G  +   Y + P RV+LG  ++  VK +SCGAAHTA VT  GQL+VWGC DGGRLGL     G   + P LVE+L  + E++  VSCG+AHTL  TAV E   G G S    K  +GGR++ AGS + LG    AF P+  ++ + VR VSAG+AHS   T EGELYTWG+NR GC G P  T F   P  V+ LY +P NLA G   RQSSV++N  +E A +G+  G     C+CTQQD Q WWEVD+G    +  V+V
Sbjct:    1 MAKKGRMTMAKSLRLEVESMWRPLMEIEAEDAAKHRADGEAAREKEYFKAEAEYQRWRTAIAAGRGDT--TLPPNGIGLSAAPSPNRIDRQLALMGLTERAGGSVTPRGVGAVVAIAAGANHALLLHRTGQLYSWGLGISGRLGLDVSLGGQPQADAPRASPIPTLAARPVTRMSAGFSHSAAVAAGGQLYTWGSGATGKLGIGACEGEAYVAAPARVLLGGSAQRPVKRLSCGAAHTAAVTGEGQLWVWGCTDGGRLGLSPLPPGGAIWVPTLVESL--LDERVALVSCGSAHTLVATAVVEEFEGSGESMLLLKIVRGGRVYAAGSASALGELQRAFAPIAALEGLAVRHVSAGHAHSAVITGEGELYTWGSNRGGCCGHPLGTAFVAAPACVAALYQRPQNLARGCTARQSSVFNNCEAERATNGETGGHGAAACTCTQQDAQAWWEVDLGSEARIDTVRV 460          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA)

HSP 1 Score: 338 bits (867), Expect = 1.040e-100
Identity = 185/446 (41.48%), Postives = 245/446 (54.93%), Query Frame = 0
Query:    8 ARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGNPQ------------------------------------------------LGLGKVDEGVYCSVPTRVMLGSISK--VKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRC-MDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            A  + L ++I +MW PLREIQ ++ A  R+  +          E  Y  WR+ +++A +   P  T RGNS+ +  GG+T R    +  +   A   ++ GA H   VH+SG LYTWG+G+ GRLGLD+T+ G+P+                                                LGL   +E  Y S+P  + L   ++  ++ +SCGAAHTA  T  G+LFVWGCGDGGRLGLG E L   + P  V+ L   G ++  VSCGNAHTLA+T + EV  G G +R K KQGG++F AGS +VLG F PAF  V   +  V   Q SAG+AHS   T+EGELY WG N DGC       +F   P L +C+Y++P NLALGRP RQSS Y    + +AVDG+  G S   C+ TQQDPQ WWEVD+G   NLH VK+
Sbjct:  569 ALAKRLVVDITKMWAPLREIQAEEDARDRQKKQTEVVENIAKREHAYEAWRQQVKEAAEATSPERTARGNSIVIESGGITARGAGHKIAQGYAAIKQIAGGAQHFAAVHQSGALYTWGLGSGGRLGLDITENGDPRADATRPTVVQALASTPVLTTACGYSHMACVTTSRDLYVWGSAASGKLGLGLAAKEEECYASLPVHLPLRPKNRPLLRTVSCGAAHTAATTTDGELFVWGCGDGGRLGLGREGLATHWSPRRVDALFEAGHRIGDVSCGNAHTLAVTLIEEVWTGTGTNRMKEKQGGQVFAAGSASVLGLFHPAFDRVMGELASVQAVQASAGFAHSGVVTSEGELYCWGMNDDGCCAAHPKVRFLAEPTLAACIYSRPGNLALGRPARQSSCYGGQDAHVAVDGNCDGSSPELCTSTQQDPQAWWEVDLGDFANLHIVKL 1014          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A482S3L9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3L9_9ARCH)

HSP 1 Score: 327 bits (837), Expect = 1.930e-96
Identity = 178/460 (38.70%), Postives = 258/460 (56.09%), Query Frame = 0
Query:    1 MSKKGKEARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGNPQL----------------------------------------------GLGKV--DEGVYCSVPTRVMLGSISK-VKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRC---------MDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            + K+ K+   +     I++MW PLRE+Q +  A       +      +  E  Y++WR  ++  R+     FTPRG SL + L G T RA D+ TPR  +A + +SAGA H  LVH++GQLYTWGVG SGRLGLD+T+ G+PQ                                               GLG++   E  YCS+PT++M+G   K V++ISCGAAH+A +T  GQL+V+GCGDGGRLGLG  R G  + P LVE   L+ EK+ SVSCGNA T+  T + +V  G+   + ++  GGR++ AG++NVLG     FT +            DDV ++QVSAGY H+   + EGEL+ WG+NR+GC G+P   +F D P  V  +Y +P NL++G+   QSS Y+   ++ AVDG + G    +C+ T Q+ Q W E+D+G++  + ++ V
Sbjct:  442 LQKRKKKVLADKFLKRIDEMWAPLREVQAETQALTIAKKTSTQHELQVKREENYQEWRGRVQNKRETMDASFTPRGQSLDIKLQGATPRAADLSTPRGFEAGLQISAGAAHTCLVHKTGQLYTWGVGTSGRLGLDMTEKGDPQADVAQPTLVQGIMDRPVIRVSCGYSHTGVIVSGGEVYMWGSAATGKCGLGEIVQSEECYCSIPTKIMVGVEDKRVRKISCGAAHSAVITEMGQLYVFGCGDGGRLGLGYNRFGTCYVPTLVE--CLLHEKILSVSCGNATTIVCTEINKVWVGDMDDKYRKVSGGRLYVAGASNVLGKQYDIFTRIHIDSDETDSNDADDVVIKQVSAGYMHTAVVSAEGELFCWGHNRNGCCGVPVVQQFVDRPTPVRFMYTRPVNLSVGKKAYQSSTYNRREAKYAVDGKKDGVGVLQCTSTHQEAQPWIEIDLGKIAVIDKIVV 899          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A6H5JHV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV0_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 6.700e-80
Identity = 135/261 (51.72%), Postives = 154/261 (59.00%), Query Frame = 0
Query:  304 EGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVK--------------------------------------------------------------------------------------VEVFGTEGGRRMAGKVTQCSAGKYVTTAVMAAADDPRDVDLAYKRAVQADAFNAEVLRQLETFFGAYDQWGRGDVMQ 478
            +GELYTWG+NRDGCLGLPR+TKFA+ PQLV+CLY  PTNLA+GRP+RQSSVYD L + +AVDG+RSGD YRKCSCTQQDPQGWWEVD+G+LV++H+VK                                                                                      VEVFGT G RR  GKVT C AGKYVTTAVMAA  DP DV+  YKRAVQADAFNAEVLR+ ETFF AYDQWGRGD ++
Sbjct:    2 DGELYTWGSNRDGCLGLPRSTKFANFPQLVTCLYVSPTNLAIGRPSRQSSVYDGLSAAMAVDGERSGDHYRKCSCTQQDPQGWWEVDLGQLVHVHQVKDDPPFDSINPNSRSDASLHLRCPYLCTKIWNRCDEPKDPSMERNFYAKRLFPCWVMASQEPFKDDVGGAALLDAMNTAVARAHFKEVEVFGTTGARRSPGKVTHCCAGKYVTTAVMAAMQDPADVETVYKRAVQADAFNAEVLREFETFFAAYDQWGRGDAIK 262          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: K0S522_THAOC (EF-hand domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S522_THAOC)

HSP 1 Score: 233 bits (593), Expect = 1.820e-63
Identity = 159/453 (35.10%), Postives = 231/453 (50.99%), Query Frame = 0
Query:    4 KGKEARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANH-VLLVH---RSGQLYTWGVGASGRLGLDLTQ----------------------------------------GGNPQLGLGKV---DEGVYCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQ-GGRIFQAGSTNVLGTFCPAFTPVRCMD--DVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDN---LGSEIAVDGDRSGDSYRKCSC-TQQDPQGWWEVDMGRLVNLHEVKV 402
            +GK    ++L L+  Q W PL + Q   A D+   +         A E+ YR W +H  + R  +KP+   +G    L  G +T R  DI+TPR  +    +S GANH  LL+H    S  LYTWGVG+ GRLG + ++                                        G   QLG G++   +E  +C +PT+++  +  +   +SCG +HTAC+   GQL+VWG  DGGRLGLGE+    Q+ PVLV++LA   E++  VSCG   TL LTA   V  GE    + R   GGR++ AG  ++LG  CP F  +   +    TV  +SAG  H    T  GE+Y WG+NR+GC G PR  +F + P  ++ LY  P+NLALG+P+R SS Y +   L +  AVDGD  G S  K    +Q +   W++VD+    ++  +++
Sbjct:  410 RGKLKTAKSLSLQFVQCWVPLAKEQAKRAKDEELESLCSKQRERAARESCYRGWIKHRNEMR--SKPITHDQG----LLAGSVTSRGRDIETPRNVEQIKAISGGANHCALLLHDANSSASLYTWGVGSLGRLGHEKSRDLNYPTLVDQLKGVQIADVGGGLSHCAAVSSAGHLYTWGTGTRGQLGFGQLGAEEEEFFCPIPTKLVFPT--RALRVSCGNSHTACIGQEGQLYVWGDPDGGRLGLGEDVDNVQYSPVLVDSLAK--ERVVDVSCGCHQTLVLTATTSV--GENTRISVRTSAGGRVYVAGPKHILGQTCPTFRQLDVFEKSSTTVECISAGNHHQAVVTNAGEVYCWGDNRNGCCGQPREMRFVETPTKIA-LYEAPSNLALGKPSRLSSRYKDASGLSANNAVDGDIDGHSEDKLLAHSQWEANPWFDVDLQSFAHISHIRL 849          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A5D6XWN2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWN2_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.150e-62
Identity = 138/395 (34.94%), Postives = 197/395 (49.87%), Query Frame = 0
Query:   57 WREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGG-------NPQ---------------------------------------LGLGKVDEGV--YCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGE-KMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            +    R   ++  P FT RG + ++ L G+T R   + +PR   A   +SAG +HV L+   G +YTWG GASGRLG    + G       +PQ                                       LG+G  D+    + ++P  V      +++ +SCGAAHT  V+ +G+LF+WG  +GGRLGLG +       P LV  LA   + +   VSCG  H+   T V         S +K+ QGG +F  GS   LG   P + PV  +D V +RQV+ G AHS   +  GELYTWG NR+GC G   T  F   P+L+  L+ +P NLALG+P RQ +VY+  G ++AV+GD SG     C  T  + + WWEV++G+   +  V+V
Sbjct:  792 YERSARVQMEDVAPEFTTRGENFRIELNGITTRGPPLHSPRGRAAVAGVSAGGSHVALLFHDGSVYTWGNGASGRLGHQQNEFGKLCYDSDHPQRVLAFKDVNIRYVSCAHSHSAATSSDGDLYTWGSAVSGKLGVGLSDDTYEQFAAIPLLVKFPGKRRIRSVSCGAAHTGAVSTAGELFMWGSANGGRLGLGVDVTDTVVVPTLVRELATKRKVRAWQVSCGTTHSAVCTEVASSF----ESGSKKLQGGHVFVCGSATPLGRHVPTWEPVPELDGVGIRQVACGVAHSAAVSAYGELYTWGTNRNGCTGHAITRTFLARPKLLKSLHIEPYNLALGKPCRQLNVYNEQGPQLAVNGDVSG-KLATCIHTHLEEKPWWEVNLGQPAVIERVRV 1181          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A8K1C5H0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H0_PYTOL)

HSP 1 Score: 223 bits (569), Expect = 5.910e-60
Identity = 168/626 (26.84%), Postives = 261/626 (41.69%), Query Frame = 0
Query:    4 KGKEARCENLRLEIEQMWDPLREIQLD-------DAADKRRSAEAGFGNAF--IAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGG----------------------------------------------NPQLGLGKVDEGVYCS--VPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAV-REVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGR-----------------------------------LVN--------------------------------------------------------LHEVKVEVFGTEGGRRMAGKVTQCSAGKYVTTAVMAAADDPRDVDLAYKRAVQADAFNAEVLRQLETFFGAYDQWGRGDVMQVG 480
            K +++  E  + ++ +MW  L+ I+ +       D  DK R        +F  IAA  + +         R++  P FT RG + ++ L G+T R   + +PR   A  +++AG  HV L+ + G +YTWG+G++GRLG    +                                                N +LG+G V++    +  VP  V       V+ +SCGAAH+  VT +G++F+WGC +GGRLGLG         P +V        ++  V+CG++H+   T +  E  GG     +K+  GG++F  G    LG +  ++  V  + DV +RQ+S G  H+   +  GELYTWG N  GC G  R   F   P+LV  L+ +P NLALG+P RQ ++Y+  G ++AV+GD  G    KC  T  + + WWEVD+G+                                   L++                                                        LH  +VEVFG        G+V     G   T  ++        +D  Y RA+QADA +A +LRQ E +  +Y  +GRG+   +G
Sbjct: 1828 KREKSLVEEEKQKLREMWAELKRIREERHAQIYKDKQDKERERINRMDASFEAIAARRLVQ---------REDLVPEFTTRGGNAKIDLSGITSRGPSLHSPRGRVATASIAAGGAHVALLLQDGSVYTWGIGSTGRLGHSRDRSSSVSFDSDHPQLVDAFRDVRIRQLACAFSHSGAVSDDGELYMWGSTTNGKLGVGVVEDCFEQNTVVPLTVKFPGKRHVRSVSCGAAHSGAVTTNGEVFMWGCANGGRLGLGPHVKDAVAVPTIVRDFVTRKLRVWQVACGHSHSALCTEIISEQRGG-----SKKLLGGQVFVCGGAIPLGRYVTSWESVPALQDVGIRQISCGATHTAAVSAYGELYTWGRNDKGCTGHNRERGFIQEPELVRSLHVEPYNLALGKPCRQINIYNEQGPQLAVNGDVDG-RLEKCIHTHLEEKPWWEVDLGQPAVIERIRVWNRTDEPTNPSKSRSEYTVRLFPFWILISEFPFKDLEGKEGLRAAKTQSAAFEQFTCNQRMTEWVLPTAHTVGQYVRIQLQSRNFLHLAEVEVFGVYSAFNYVGRVGTAHCGNEATLVIVPPTHQQSALDDYYLRAIQADADHATILRQYEAYERSYRLFGRGNSQVLG 2438          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A2P4XEF6_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEF6_9STRA)

HSP 1 Score: 215 bits (548), Expect = 2.870e-58
Identity = 136/449 (30.29%), Postives = 208/449 (46.33%), Query Frame = 0
Query:   13 LRLEIEQM---WDPLREIQLDDAADKRRSAEAGFGNAFIAAETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGG------------------------------------------------------NPQLGLGKVDEGV--YCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            L+ E E+M   W  ++ ++    A +   A+         A+  Y    E      ++  P  T RG + ++ + G+T R   + +PR   A   +SAG +HV L+ + G LYT GVG SGRLGL     G                                                      N +LG+G V++    Y   P  V      K++ +SCGA+HT  VT +G+LF+WG  +GGRLGLG   +     P LV  L     ++  VSCG AH+   T V      E    +K+  GG ++  G    L  +  ++  V  +D V +RQV+ G +H+   ++ GELYTWG N  GC G      F D P+L+ CL+ +P NLALGRP RQ ++Y+  G  +AV+G++ G +   C  T  +   WWEVD+G+   + ++++
Sbjct:   81 LQAEKEKMLHEWQDVKTLREVRHAKREEDAKLKIIEKINHADHAYESRAERRVVQLEDTIPELTVRGENSRIDISGITTRGPPLHSPRGAVAVANVSAGGSHVALLMQDGSLYTCGVGTSGRLGLQSNHRGATCFDSNHPNRIEAFNVRVASLSEDISVRQVSCSFSHSAAIDSDGSLYTWGSACNGKLGVGIVEDEYKQYSLTPLLVKFPGKRKIRHVSCGASHTGAVTTAGELFMWGSANGGRLGLGPHVIDTIVVPTLVRDLVNKKVRVWQVSCGTAHSAFCTEVTS----EYSEGSKKLLGGHVYVCGGATALSRYMLSWERVPELDSVAIRQVACGNSHTAAVSSYGELYTWGRNFHGCTGHDANRIFIDKPELLKCLHVEPYNLALGRPCRQITIYNEQGPHLAVNGEKGG-TLATCIHTHLEDSPWWEVDLGQPAVIEKIRL 524          
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Match: A0A6G0XXD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD3_9STRA)

HSP 1 Score: 217 bits (552), Expect = 8.190e-58
Identity = 128/381 (33.60%), Postives = 188/381 (49.34%), Query Frame = 0
Query:   70 PVFTPRGNSLQLSLGGLTDRAGDIQTPRANDAAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGN----------------------------------------------PQLGLGKVDEGV--YCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLGLGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGPSRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCCCTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTRQSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEVKV 402
            P FTPR +SL + L G+T R   + +PR   A   +SAG N+   V  +G LY+WGVG SGRLG   T  G                                                +LG+G  D     +   P R+      +V++ISCG AHT  VT  G++F+WGC +GGRLGLGE        P  V++LA V  ++  +SCGN H+   T ++  +     +  +   GG ++  GS   L  + P ++ V+ +  + V++V  G+ H+   T  GELYTWG N D C G P   +    P+L+   +  P NLAL +P RQSSV++   ++ AVDG++SG  +  C+ TQ D   WWEVD+G+   +  +KV
Sbjct:  776 PEFTPRNSSLIIELNGVTSRGPPLHSPRGASAVWKISAGENYACAVTHNGSLYSWGVGISGRLGQGTTMEGTINADFDRPTRVLALKSTYIQDIACAFDHSAAITVDGQVYVWGSTSTGKLGIGPQDAKYEQFAIYPVRLNFPRHRRVRQISCGRAHTGAVTTDGEVFMWGCANGGRLGLGENVQDEVTVPTFVKSLAHV--RVARISCGNCHSAVCTDIQSTM----DNTIETLTGGDVYMCGSAGPLLHYTPTWSIVQKLRGLPVKEVCCGFGHTAAVTYFGELYTWGQNIDECTGHPADRRVIQEPELLRAFHVAPYNLALRKPARQSSVFNEQDADRAVDGNKSGQLHT-CNHTQFDDHPWWEVDLGQPSVIERIKV 1149          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig954.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVN6_ECTSI1.220e-24057.14Guanyl nucleotide exchange factor n=1 Tax=Ectocarp... [more]
A0A836CBD3_9STRA2.230e-10843.10Guanyl nucleotide exchange factor n=1 Tax=Tribonem... [more]
A0A8J2SRF7_9STRA1.040e-10041.48Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A482S3L9_9ARCH1.930e-9638.70Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6H5JHV0_9PHAE6.700e-8051.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
K0S522_THAOC1.820e-6335.10EF-hand domain-containing protein n=1 Tax=Thalassi... [more]
A0A5D6XWN2_9STRA1.150e-6234.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1C5H0_PYTOL5.910e-6026.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4XEF6_9STRA2.870e-5830.29Regulator of chromosome condensation (RCC1) n=1 Ta... [more]
A0A6G0XXD3_9STRA8.190e-5833.60Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 169..182
score: 29.76
coord: 188..204
score: 35.29
coord: 307..321
score: 42.22
coord: 132..148
score: 44.12
coord: 291..307
score: 31.37
coord: 461..480
score: 28.79
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 185..238
e-value: 3.1E-11
score: 43.7
coord: 118..182
e-value: 2.2E-9
score: 37.7
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 119..185
score: 13.559299
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 186..241
score: 15.6296
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 305..356
score: 8.8559
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 73..343
e-value: 2.5E-46
score: 160.3
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 99..338
NoneNo IPR availablePFAMPF13540RCC1_2coord: 288..317
e-value: 2.0E-9
score: 37.0
NoneNo IPR availableGENE3D2.60.120.260coord: 344..435
e-value: 1.0E-14
score: 56.6
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 278..355
coord: 103..240
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 340..415

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig954contigA-nodosum_M_contig954:119237..130905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig954.20.1mRNA_A-nodosum_M_contig954.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig954 119237..130905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig954.20.1 ID=prot_A-nodosum_M_contig954.20.1|Name=mRNA_A-nodosum_M_contig954.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=481bp
MSKKGKEARCENLRLEIEQMWDPLREIQLDDAADKRRSAEAGFGNAFIAA
ETIYRDWREHIRKARDEAKPVFTPRGNSLQLSLGGLTDRAGDIQTPRAND
AAITMSAGANHVLLVHRSGQLYTWGVGASGRLGLDLTQGGNPQLGLGKVD
EGVYCSVPTRVMLGSISKVKEISCGAAHTACVTASGQLFVWGCGDGGRLG
LGEERLGPQFEPVLVETLALVGEKMCSVSCGNAHTLALTAVREVLGGEGP
SRTKRKQGGRIFQAGSTNVLGTFCPAFTPVRCMDDVTVRQVSAGYAHSCC
CTTEGELYTWGNNRDGCLGLPRTTKFADIPQLVSCLYAKPTNLALGRPTR
QSSVYDNLGSEIAVDGDRSGDSYRKCSCTQQDPQGWWEVDMGRLVNLHEV
KVEVFGTEGGRRMAGKVTQCSAGKYVTTAVMAAADDPRDVDLAYKRAVQA
DAFNAEVLRQLETFFGAYDQWGRGDVMQVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens
IPR009091RCC1/BLIP-II
IPR008979Galactose-bd-like_sf